RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 BEX5Q5H9J7 111 aa10.6□□□□□ -0.71
TPM1-216ENST00000558910 ALG10BQ5I7T1 473 aa10.6□□□□□ -0.71
TPM1-216ENST00000558910 METTL21CQ5VZV1 264 aa10.6□□□□□ -0.71
TPM1-216ENST00000558910 DHRS4L2Q6PKH6 230 aa10.6□□□□□ -0.71
TPM1-216ENST00000558910 Q6ZT83 130 aa10.6□□□□□ -0.71
TPM1-216ENST00000558910 AAED1Q7RTV5 226 aa10.6□□□□□ -0.71
TPM1-216ENST00000558910 DPP10Q8N608 796 aa10.6□□□□□ -0.71
TPM1-216ENST00000558910 C10orf82Q8WW14 230 aa10.6□□□□□ -0.71
TPM1-216ENST00000558910 RCN3Q96D15 328 aa10.6□□□□□ -0.71
TPM1-216ENST00000558910 PERPQ96FX8 193 aa10.6□□□□□ -0.71
TPM1-216ENST00000558910 MCHR1Q99705 422 aa10.6□□□□□ -0.71
TPM1-216ENST00000558910 CCL19Q99731 98 aa10.6□□□□□ -0.71
TPM1-216ENST00000558910 ELAC2Q9BQ52 826 aaKnown RBP10.6□□□□□ -0.71
TPM1-216ENST00000558910 ECSITQ9BQ95 431 aa10.6□□□□□ -0.71
TPM1-216ENST00000558910 TMEM38AQ9H6F2 299 aa10.6□□□□□ -0.71
TPM1-216ENST00000558910 EDARQ9UNE0 448 aa10.6□□□□□ -0.71
TPM1-216ENST00000558910 TRAPPC4Q9Y296 219 aa10.6□□□□□ -0.71
TPM1-216ENST00000558910 FLVCR1Q9Y5Y0 555 aa10.6□□□□□ -0.71
TPM1-216ENST00000558910 VPS13CQ709C8 3753 aa10.59□□□□□ -0.71
TPM1-216ENST00000558910 PRORSD1PA6NEY8 169 aa10.59□□□□□ -0.71
TPM1-216ENST00000558910 GPR171O14626 319 aa10.59□□□□□ -0.71
TPM1-216ENST00000558910 AIM2O14862 343 aa10.59□□□□□ -0.71
TPM1-216ENST00000558910 MFN2O95140 757 aa10.59□□□□□ -0.71
TPM1-216ENST00000558910 PPP3CBP16298 524 aa10.59□□□□□ -0.71
TPM1-216ENST00000558910 CD53P19397 219 aa10.59□□□□□ -0.71
TPM1-216ENST00000558910 GGT1P19440 569 aa10.59□□□□□ -0.71
TPM1-216ENST00000558910 FKBP2P26885 142 aaKnown RBP10.59□□□□□ -0.71
TPM1-216ENST00000558910 IRX1P78414 480 aaPredicted RBP10.59□□□□□ -0.71
TPM1-216ENST00000558910 PPA1Q15181 289 aa10.59□□□□□ -0.71
TPM1-216ENST00000558910 TESK1Q15569 626 aa10.59□□□□□ -0.71
TPM1-216ENST00000558910 ACKR1Q16570 336 aa10.59□□□□□ -0.71
TPM1-216ENST00000558910 DUSP7Q16829 419 aa10.59□□□□□ -0.71
TPM1-216ENST00000558910 ZSWIM7Q19AV6 140 aa10.59□□□□□ -0.71
TPM1-216ENST00000558910 DEFB113Q30KQ7 82 aa10.59□□□□□ -0.71
TPM1-216ENST00000558910 LRRC23Q53EV4 343 aaPredicted RBP10.59□□□□□ -0.71
TPM1-216ENST00000558910 TSPO2Q5TGU0 170 aa10.59□□□□□ -0.71
TPM1-216ENST00000558910 CARD17Q5XLA6 110 aa10.59□□□□□ -0.71
TPM1-216ENST00000558910 FBXW9Q5XUX1 488 aa10.59□□□□□ -0.71
TPM1-216ENST00000558910 ADAM5Q6NVV9 412 aa10.59□□□□□ -0.71
TPM1-216ENST00000558910 NIPAL3Q6P499 406 aa10.59□□□□□ -0.71
TPM1-216ENST00000558910 PAQR6Q6TCH4 344 aa10.59□□□□□ -0.71
TPM1-216ENST00000558910 ZNF704Q6ZNC4 412 aaPredicted RBP10.59□□□□□ -0.71
TPM1-216ENST00000558910 RANBP3LQ86VV4 465 aaPredicted RBP10.59□□□□□ -0.71
TPM1-216ENST00000558910 ZNF433Q8N7K0 673 aaPredicted RBP10.59□□□□□ -0.71
TPM1-216ENST00000558910 OR9K2Q8NGE7 335 aa10.59□□□□□ -0.71
TPM1-216ENST00000558910 OR4D11Q8NGI4 311 aa10.59□□□□□ -0.71
TPM1-216ENST00000558910 AKAP1Q92667 903 aaKnown RBP eCLIP10.59□□□□□ -0.71
TPM1-216ENST00000558910 TAAR8Q969N4 342 aa10.59□□□□□ -0.71
TPM1-216ENST00000558910 LRRC58Q96CX6 371 aa10.59□□□□□ -0.71
TPM1-216ENST00000558910 HDHD5Q9BXW7 423 aa10.59□□□□□ -0.71
TPM1-216ENST00000558910 POTEKPQ9BYX7 375 aa10.59□□□□□ -0.71
TPM1-216ENST00000558910 TRIM2Q9C040 744 aa10.59□□□□□ -0.71
TPM1-216ENST00000558910 KAT8Q9H7Z6 458 aaKnown RBP10.59□□□□□ -0.71
TPM1-216ENST00000558910 GP6Q9HCN6 339 aa10.59□□□□□ -0.71
TPM1-216ENST00000558910 SLC7A10Q9NS82 523 aa10.59□□□□□ -0.71
TPM1-216ENST00000558910 TMEM45AQ9NWC5 275 aa10.59□□□□□ -0.71
TPM1-216ENST00000558910 ASB6Q9NWX5 421 aa10.59□□□□□ -0.71
TPM1-216ENST00000558910 KLHL14Q9P2G3 628 aa10.59□□□□□ -0.71
TPM1-216ENST00000558910 IGKV3D-15A0A087WSY6 115 aa10.58□□□□□ -0.72
TPM1-216ENST00000558910 AQP7P3A6NL99 342 aa10.58□□□□□ -0.72
TPM1-216ENST00000558910 M0R082 166 aa10.58□□□□□ -0.72
TPM1-216ENST00000558910 M0R1B8 84 aa10.58□□□□□ -0.72
TPM1-216ENST00000558910 TPST2O60704 377 aa10.58□□□□□ -0.72
TPM1-216ENST00000558910 PNMTP11086 282 aa10.58□□□□□ -0.72
TPM1-216ENST00000558910 NQO1P15559 274 aaKnown RBP10.58□□□□□ -0.72
TPM1-216ENST00000558910 LOXP28300 417 aaPredicted RBP10.58□□□□□ -0.72
TPM1-216ENST00000558910 GRPRP30550 384 aa10.58□□□□□ -0.72
TPM1-216ENST00000558910 SELENOPP49908 381 aa10.58□□□□□ -0.72
TPM1-216ENST00000558910 CDH12P55289 794 aa10.58□□□□□ -0.72
TPM1-216ENST00000558910 CLDN17P56750 224 aa10.58□□□□□ -0.72
TPM1-216ENST00000558910 EGR4Q05215 589 aa10.58□□□□□ -0.72
TPM1-216ENST00000558910 C1DQ13901 141 aaKnown RBP10.58□□□□□ -0.72
TPM1-216ENST00000558910 SLC17A1Q14916 467 aa10.58□□□□□ -0.72
TPM1-216ENST00000558910 P2RY6Q15077 328 aa10.58□□□□□ -0.72
TPM1-216ENST00000558910 MAPRE2Q15555 327 aa10.58□□□□□ -0.72
TPM1-216ENST00000558910 DEF8Q6ZN54 512 aa10.58□□□□□ -0.72
TPM1-216ENST00000558910 WFDC11Q8NEX6 87 aa10.58□□□□□ -0.72
TPM1-216ENST00000558910 KBTBD8Q8NFY9 601 aa10.58□□□□□ -0.72
TPM1-216ENST00000558910 GPR32P1Q8NGA4 272 aa10.58□□□□□ -0.72
TPM1-216ENST00000558910 OR6T1Q8NGN1 323 aa10.58□□□□□ -0.72
TPM1-216ENST00000558910 ZNF417Q8TAU3 575 aa10.58□□□□□ -0.72
TPM1-216ENST00000558910 STON2Q8WXE9 905 aa10.58□□□□□ -0.72
TPM1-216ENST00000558910 HSD17B8Q92506 261 aa10.58□□□□□ -0.72
TPM1-216ENST00000558910 NINJ1Q92982 152 aa10.58□□□□□ -0.72
TPM1-216ENST00000558910 TAMM41Q96BW9 452 aa10.58□□□□□ -0.72
TPM1-216ENST00000558910 MUCL1Q96DR8 90 aa10.58□□□□□ -0.72
TPM1-216ENST00000558910 ZNF587Q96SQ5 575 aaPredicted RBP10.58□□□□□ -0.72
TPM1-216ENST00000558910 PTDSS2Q9BVG9 487 aa10.58□□□□□ -0.72
TPM1-216ENST00000558910 SLC9A8Q9Y2E8 581 aa10.58□□□□□ -0.72
TPM1-216ENST00000558910 IGKV1D-42A0A075B6H8 117 aa10.57□□□□□ -0.72
TPM1-216ENST00000558910 DPRXA6NFQ7 191 aa10.57□□□□□ -0.72
TPM1-216ENST00000558910 DNPH1O43598 174 aa10.57□□□□□ -0.72
TPM1-216ENST00000558910 SMPD2O60906 423 aa10.57□□□□□ -0.72
TPM1-216ENST00000558910 CD3EP07766 207 aa10.57□□□□□ -0.72
TPM1-216ENST00000558910 ITGA5P08648 1049 aa10.57□□□□□ -0.72
TPM1-216ENST00000558910 PCGF2P35227 344 aa10.57□□□□□ -0.72
TPM1-216ENST00000558910 TUBA1BP68363 451 aa10.57□□□□□ -0.72
TPM1-216ENST00000558910 TUBA4AP68366 448 aa10.57□□□□□ -0.72
TPM1-216ENST00000558910 H3F3AP84243 136 aa10.57□□□□□ -0.72
TPM1-216ENST00000558910 BSPH1Q075Z2 132 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms