RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 C12orf10Q9HB07 376 aa13.48□□□□□ -0.25
RPL28-207ENST00000558815 MALT1Q9UDY8 824 aa13.48□□□□□ -0.25
RPL28-207ENST00000558815 IGKV1D-42A0A075B6H8 117 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 DPRXA6NFQ7 191 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 CPSF4LA6NMK7 179 aaKnown RBP13.47□□□□□ -0.25
RPL28-207ENST00000558815 BBIP1A8MTZ0 92 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 FTCDNL1E5RQL4 147 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 M0R082 166 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 FXYD1O00168 92 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 HS3ST1O14792 307 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 TPST2O60704 377 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 LGI1O95970 557 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 ITGA5P08648 1049 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 GRPRP30550 384 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 SELENOPP49908 381 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 ZNF83P51522 516 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 P2RY4P51582 365 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 CDH12P55289 794 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 LGALS3BPQ08380 585 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 VMACQ2NL98 169 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 INTS11Q5TA45 600 aaKnown RBP13.47□□□□□ -0.25
RPL28-207ENST00000558815 NIPAL3Q6P499 406 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 SEZ6L2Q6UXD5 910 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 CREB3L2Q70SY1 520 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 PATL1Q86TB9 770 aaKnown RBP13.47□□□□□ -0.25
RPL28-207ENST00000558815 C10orf53Q8N6V4 93 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 ZIC4Q8N9L1 334 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 PCYOX1LQ8NBM8 494 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 ZNF417Q8TAU3 575 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 C10orf82Q8WW14 230 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 TAAR8Q969N4 342 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 TMEM45BQ96B21 275 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 TAMM41Q96BW9 452 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 ZNF587Q96SQ5 575 aaPredicted RBP13.47□□□□□ -0.25
RPL28-207ENST00000558815 ARHGDIGQ99819 225 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 SH3GL1Q99961 368 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 TMEM204Q9BSN7 226 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 C1QTNF6Q9BXI9 259 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 SLCO5A1Q9H2Y9 848 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 NPAP1Q9NZP6 1156 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 USP22Q9UPT9 525 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 RASD1Q9Y272 281 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 HIVEP1P15822 2718 aa13.47□□□□□ -0.25
RPL28-207ENST00000558815 TRAV36DV7A0A075B6V5 113 aa13.46□□□□□ -0.25
RPL28-207ENST00000558815 A0A0B4J2E0 115 aa13.46□□□□□ -0.25
RPL28-207ENST00000558815 A0A1B0GX12 115 aa13.46□□□□□ -0.25
RPL28-207ENST00000558815 OR2T1O43869 369 aa13.46□□□□□ -0.25
RPL28-207ENST00000558815 VAMP5O95183 116 aa13.46□□□□□ -0.25
RPL28-207ENST00000558815 NQO1P15559 274 aaKnown RBP13.46□□□□□ -0.25
RPL28-207ENST00000558815 GZMMP51124 257 aa13.46□□□□□ -0.25
RPL28-207ENST00000558815 CLDN17P56750 224 aa13.46□□□□□ -0.25
RPL28-207ENST00000558815 C1DQ13901 141 aaKnown RBP13.46□□□□□ -0.25
RPL28-207ENST00000558815 GABRA6Q16445 453 aa13.46□□□□□ -0.25
RPL28-207ENST00000558815 COQ5Q5HYK3 327 aa13.46□□□□□ -0.25
RPL28-207ENST00000558815 Q5PR19 223 aa13.46□□□□□ -0.25
RPL28-207ENST00000558815 FAM69AQ5T7M9 428 aa13.46□□□□□ -0.25
RPL28-207ENST00000558815 FAM91A1Q658Y4 838 aa13.46□□□□□ -0.25
RPL28-207ENST00000558815 C5orf46Q6UWT4 87 aa13.46□□□□□ -0.25
RPL28-207ENST00000558815 RBM45Q8IUH3 476 aaKnown RBP13.46□□□□□ -0.25
RPL28-207ENST00000558815 OR4D11Q8NGI4 311 aa13.46□□□□□ -0.25
RPL28-207ENST00000558815 OR6T1Q8NGN1 323 aa13.46□□□□□ -0.25
RPL28-207ENST00000558815 TMEM171Q8WVE6 324 aa13.46□□□□□ -0.25
RPL28-207ENST00000558815 RCN3Q96D15 328 aa13.46□□□□□ -0.25
RPL28-207ENST00000558815 ALKBH3Q96Q83 286 aaPredicted RBP13.46□□□□□ -0.25
RPL28-207ENST00000558815 PIP5K1AQ99755 562 aa13.46□□□□□ -0.25
RPL28-207ENST00000558815 TMUB1Q9BVT8 246 aa13.46□□□□□ -0.25
RPL28-207ENST00000558815 GID8Q9NWU2 228 aa13.46□□□□□ -0.25
RPL28-207ENST00000558815 LAMP3Q9UQV4 416 aa13.46□□□□□ -0.25
RPL28-207ENST00000558815 TEP1Q99973 2627 aaKnown RBP13.45□□□□□ -0.26
RPL28-207ENST00000558815 A0A087WUJ7 227 aa13.45□□□□□ -0.26
RPL28-207ENST00000558815 LRRN3E7EW58 273 aa13.45□□□□□ -0.26
RPL28-207ENST00000558815 M0R1B8 84 aa13.45□□□□□ -0.26
RPL28-207ENST00000558815 ABCD4O14678 606 aa13.45□□□□□ -0.26
RPL28-207ENST00000558815 AIM2O14862 343 aa13.45□□□□□ -0.26
RPL28-207ENST00000558815 ZNF43P17038 809 aa13.45□□□□□ -0.26
RPL28-207ENST00000558815 CD247P20963 164 aa13.45□□□□□ -0.26
RPL28-207ENST00000558815 HOXC12P31275 282 aa13.45□□□□□ -0.26
RPL28-207ENST00000558815 NPTX1Q15818 432 aa13.45□□□□□ -0.26
RPL28-207ENST00000558815 NRF1Q16656 503 aa13.45□□□□□ -0.26
RPL28-207ENST00000558815 ENTPD8Q5MY95 495 aa13.45□□□□□ -0.26
RPL28-207ENST00000558815 OR7E24Q6IFN5 339 aa13.45□□□□□ -0.26
RPL28-207ENST00000558815 P2RY8Q86VZ1 359 aa13.45□□□□□ -0.26
RPL28-207ENST00000558815 EPHX4Q8IUS5 362 aa13.45□□□□□ -0.26
RPL28-207ENST00000558815 PIAS4Q8N2W9 510 aaPredicted RBP13.45□□□□□ -0.26
RPL28-207ENST00000558815 ZNF611Q8N823 705 aa13.45□□□□□ -0.26
RPL28-207ENST00000558815 POMGNT2Q8NAT1 580 aa13.45□□□□□ -0.26
RPL28-207ENST00000558815 OR8J3Q8NGG0 315 aa13.45□□□□□ -0.26
RPL28-207ENST00000558815 ZNF317Q96PQ6 595 aaPredicted RBP13.45□□□□□ -0.26
RPL28-207ENST00000558815 EPYCQ99645 322 aa13.45□□□□□ -0.26
RPL28-207ENST00000558815 FAM107BQ9H098 131 aa13.45□□□□□ -0.26
RPL28-207ENST00000558815 EVA1AQ9H8M9 152 aa13.45□□□□□ -0.26
RPL28-207ENST00000558815 SLC25A15Q9Y619 301 aa13.45□□□□□ -0.26
RPL28-207ENST00000558815 ITPR3Q14573 2671 aa13.44□□□□□ -0.26
RPL28-207ENST00000558815 ZNF587BE7ETH6 402 aa13.44□□□□□ -0.26
RPL28-207ENST00000558815 PDLIM1O00151 329 aa13.44□□□□□ -0.26
RPL28-207ENST00000558815 ARHGEF9O43307 516 aa13.44□□□□□ -0.26
RPL28-207ENST00000558815 C8BP07358 591 aa13.44□□□□□ -0.26
RPL28-207ENST00000558815 TNFRSF1BP20333 461 aa13.44□□□□□ -0.26
RPL28-207ENST00000558815 MPGP29372 298 aa13.44□□□□□ -0.26
RPL28-207ENST00000558815 TGFBR3Q03167 851 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms