RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 MOGAT1Q96PD6 335 aa12.24□□□□□ -0.45
TSPAN3-205ENST00000558745 CDRT15Q96T59 188 aa12.24□□□□□ -0.45
TSPAN3-205ENST00000558745 PRSS27Q9BQR3 290 aa12.24□□□□□ -0.45
TSPAN3-205ENST00000558745 EVA1AQ9H8M9 152 aa12.24□□□□□ -0.45
TSPAN3-205ENST00000558745 C6orf203Q9P0P8 240 aaPredicted RBP12.24□□□□□ -0.45
TSPAN3-205ENST00000558745 BAG5Q9UL15 447 aa12.24□□□□□ -0.45
TSPAN3-205ENST00000558745 AP3M1Q9Y2T2 418 aa12.24□□□□□ -0.45
TSPAN3-205ENST00000558745 APCP25054 2843 aa12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 ABCA4P78363 2273 aa12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 TRAV36DV7A0A075B6V5 113 aa12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 TRAPPC13A5PLN9 417 aa12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 A6NNC1 897 aa12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 B2RBV5 119 aa12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 J3KTA2 159 aa12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 M0R082 166 aa12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 KPNA4O00629 521 aaPredicted RBP12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 SIAH2O43255 324 aa12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 MRPL33O75394 65 aaKnown RBP12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 CTAG2O75638 210 aa12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 LYZL6O75951 148 aa12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 IFNA14P01570 189 aa12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 BGLAPP02818 100 aa12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 T-ENOLP0DO92 83 aa12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 GGT1P19440 569 aa12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 LGALS3BPQ08380 585 aa12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 DAZAP2Q15038 168 aaPredicted RBP12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 C9orf135Q5VTT2 229 aa12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 GLYATQ6IB77 296 aa12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 EPHX4Q8IUS5 362 aa12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 UBE2J2Q8N2K1 259 aa12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 C10orf53Q8N6V4 93 aa12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 ZNF417Q8TAU3 575 aa12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 FAM162AQ96A26 154 aa12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 NSL1Q96IY1 281 aa12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 DACH2Q96NX9 599 aa12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 ZNF587Q96SQ5 575 aaPredicted RBP12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 MED18Q9BUE0 208 aa12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 AMBRA1Q9C0C7 1298 aa12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 LIME1Q9H400 295 aa12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 SPAG4Q9NPE6 437 aa12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 RHCGQ9UBD6 479 aa12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 NDRG3Q9UGV2 375 aa12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 SLC9A8Q9Y2E8 581 aa12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 TESMINQ9Y4I5 508 aa12.23□□□□□ -0.45
TSPAN3-205ENST00000558745 AKAP6Q13023 2319 aa12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 A0A1W2PPR1 153 aa12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 FAM221AA4D161 298 aa12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 MS4A18H0YCH9 400 aa12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 GPR171O14626 319 aa12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 CASKO14936 926 aa12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 CHP2O43745 196 aa12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 HPRP00739 348 aa12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 IGHV1-2P23083 117 aa12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 PEX19P40855 299 aa12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 LSM11P83369 360 aaKnown RBP eCLIP12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 MXRA7P84157 204 aa12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 KRT72Q14CN4 511 aa12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 MS4A18Q3C1V0 323 aa12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 SFRP5Q5T4F7 317 aa12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 FAM69AQ5T7M9 428 aa12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 CASP12Q6UXS9 341 aa12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 RINLQ6ZS11 566 aa12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 CREB3L2Q70SY1 520 aa12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 CBLL1Q75N03 491 aa12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 DEFB107AQ8IZN7 70 aa12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 PGAM4Q8N0Y7 254 aa12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 LRRC17Q8N6Y2 441 aa12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 BCAS4Q8TDM0 211 aa12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 APH1AQ96BI3 265 aa12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 S100PBPQ96BU1 408 aa12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 HSH2DQ96JZ2 352 aa12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 TACO1Q9BSH4 297 aaKnown RBP12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 POLDIP3Q9BY77 421 aaKnown RBP12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 ACTR6Q9GZN1 396 aa12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 PCDHAC1Q9H158 963 aa12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 SLC24A3Q9HC58 644 aa12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 RASSF1Q9NS23 344 aa12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 EMC3Q9P0I2 261 aa12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 CD300AQ9UGN4 299 aa12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 RIMS3Q9UJD0 308 aa12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 SPG11Q96JI7 2443 aa12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 ALPK2Q86TB3 2170 aa12.22□□□□□ -0.45
TSPAN3-205ENST00000558745 NDUFAB1O14561 156 aa12.21□□□□□ -0.45
TSPAN3-205ENST00000558745 OR2T1O43869 369 aa12.21□□□□□ -0.45
TSPAN3-205ENST00000558745 CH25HO95992 272 aa12.21□□□□□ -0.45
TSPAN3-205ENST00000558745 HLA-DOBP13765 273 aa12.21□□□□□ -0.45
TSPAN3-205ENST00000558745 GTF2E2P29084 291 aaKnown RBP12.21□□□□□ -0.45
TSPAN3-205ENST00000558745 SELENOPP49908 381 aa12.21□□□□□ -0.45
TSPAN3-205ENST00000558745 TAS2R41P59536 307 aa12.21□□□□□ -0.45
TSPAN3-205ENST00000558745 IL1RL1Q01638 556 aa12.21□□□□□ -0.45
TSPAN3-205ENST00000558745 FAPQ12884 760 aa12.21□□□□□ -0.45
TSPAN3-205ENST00000558745 TSPO2Q5TGU0 170 aa12.21□□□□□ -0.45
TSPAN3-205ENST00000558745 FBXW9Q5XUX1 488 aa12.21□□□□□ -0.45
TSPAN3-205ENST00000558745 TTC33Q6PID6 262 aaPredicted RBP12.21□□□□□ -0.45
TSPAN3-205ENST00000558745 Q6ZT83 130 aa12.21□□□□□ -0.45
TSPAN3-205ENST00000558745 FKBP9P1Q75LS8 142 aa12.21□□□□□ -0.45
TSPAN3-205ENST00000558745 AAED1Q7RTV5 226 aa12.21□□□□□ -0.45
TSPAN3-205ENST00000558745 TSEN54Q7Z6J9 526 aaKnown RBP12.21□□□□□ -0.45
TSPAN3-205ENST00000558745 WFDC8Q8IUA0 241 aa12.21□□□□□ -0.45
TSPAN3-205ENST00000558745 WDFY1Q8IWB7 410 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms