RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 MGARPQ8TDB4 240 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 CNOT9Q92600 299 aaKnown RBP7.1□□□□□ -1.27
TRAF3-205ENST00000558700 NEUROG1Q92886 237 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 ZNF775Q96BV0 537 aaPredicted RBP7.1□□□□□ -1.27
TRAF3-205ENST00000558700 DNAJA3Q96EY1 480 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 C1orf159Q96HA4 380 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 RADILQ96JH8 1075 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 TEX37Q96LM6 180 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 NAA11Q9BSU3 229 aaPredicted RBP7.1□□□□□ -1.27
TRAF3-205ENST00000558700 INPP5KQ9BT40 448 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 TRAF4Q9BUZ4 470 aaPredicted RBP7.1□□□□□ -1.27
TRAF3-205ENST00000558700 WDR55Q9H6Y2 383 aaPredicted RBP7.1□□□□□ -1.27
TRAF3-205ENST00000558700 RMND5AQ9H871 391 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 PARPBPQ9NWS1 579 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 THUMPD1Q9NXG2 353 aaKnown RBP7.1□□□□□ -1.27
TRAF3-205ENST00000558700 NPAP1Q9NZP6 1156 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 TMEM181Q9P2C4 612 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 OSGIN1Q9UJX0 560 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 POU2F3Q9UKI9 436 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 PRDM4Q9UKN5 801 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 TMED7Q9Y3B3 224 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 GPR45Q9Y5Y3 372 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 TMEM72A0PK05 275 aa7.09□□□□□ -1.27
TRAF3-205ENST00000558700 CDHR4A6H8M9 788 aa7.09□□□□□ -1.27
TRAF3-205ENST00000558700 ERLIN1O75477 346 aa7.09□□□□□ -1.27
TRAF3-205ENST00000558700 SLC22A3O75751 556 aa7.09□□□□□ -1.27
TRAF3-205ENST00000558700 GPIP06744 558 aa7.09□□□□□ -1.27
TRAF3-205ENST00000558700 ZCCHC18P0CG32 403 aa7.09□□□□□ -1.27
TRAF3-205ENST00000558700 IL12AP29459 219 aa7.09□□□□□ -1.27
TRAF3-205ENST00000558700 CRATP43155 626 aa7.09□□□□□ -1.27
TRAF3-205ENST00000558700 ZNF83P51522 516 aa7.09□□□□□ -1.27
TRAF3-205ENST00000558700 SLC18A1P54219 525 aa7.09□□□□□ -1.27
TRAF3-205ENST00000558700 COPZ1P61923 177 aa7.09□□□□□ -1.27
TRAF3-205ENST00000558700 TGFBR3Q03167 851 aa7.09□□□□□ -1.27
TRAF3-205ENST00000558700 TNK1Q13470 666 aa7.09□□□□□ -1.27
TRAF3-205ENST00000558700 LARS2Q15031 903 aaKnown RBP7.09□□□□□ -1.27
TRAF3-205ENST00000558700 GSTA3Q16772 222 aa7.09□□□□□ -1.27
TRAF3-205ENST00000558700 PGGHGQ32M88 737 aa7.09□□□□□ -1.27
TRAF3-205ENST00000558700 RNF220Q5VTB9 566 aa7.09□□□□□ -1.27
TRAF3-205ENST00000558700 AGAP6Q5VW22 663 aa7.09□□□□□ -1.27
TRAF3-205ENST00000558700 SLC22A25Q6T423 547 aa7.09□□□□□ -1.27
TRAF3-205ENST00000558700 LYPD4Q6UWN0 246 aa7.09□□□□□ -1.27
TRAF3-205ENST00000558700 ZNF836Q6ZNA1 936 aa7.09□□□□□ -1.27
TRAF3-205ENST00000558700 ABHD12BQ7Z5M8 362 aaPredicted RBP7.09□□□□□ -1.27
TRAF3-205ENST00000558700 CCDC103Q8IW40 242 aa7.09□□□□□ -1.27
TRAF3-205ENST00000558700 OR52N5Q8NH56 324 aa7.09□□□□□ -1.27
TRAF3-205ENST00000558700 OR52P1PQ8NH57 321 aa7.09□□□□□ -1.27
TRAF3-205ENST00000558700 TMEM45BQ96B21 275 aa7.09□□□□□ -1.27
TRAF3-205ENST00000558700 ZG16BQ96DA0 208 aa7.09□□□□□ -1.27
TRAF3-205ENST00000558700 ITCHQ96J02 903 aa7.09□□□□□ -1.27
TRAF3-205ENST00000558700 MAELQ96JY0 434 aaKnown RBP7.09□□□□□ -1.27
TRAF3-205ENST00000558700 TAPBPLQ9BX59 468 aa7.09□□□□□ -1.27
TRAF3-205ENST00000558700 AMBRA1Q9C0C7 1298 aa7.09□□□□□ -1.27
TRAF3-205ENST00000558700 SLCO5A1Q9H2Y9 848 aa7.09□□□□□ -1.27
TRAF3-205ENST00000558700 RAD21L1Q9H4I0 556 aa7.09□□□□□ -1.27
TRAF3-205ENST00000558700 ARMC7Q9H6L4 198 aa7.09□□□□□ -1.27
TRAF3-205ENST00000558700 MTHFD2LQ9H903 347 aaPredicted RBP7.09□□□□□ -1.27
TRAF3-205ENST00000558700 CISD1Q9NZ45 108 aaKnown RBP7.09□□□□□ -1.27
TRAF3-205ENST00000558700 UPB1Q9UBR1 384 aa7.09□□□□□ -1.27
TRAF3-205ENST00000558700 ZNF443Q9Y2A4 671 aaPredicted RBP7.09□□□□□ -1.27
TRAF3-205ENST00000558700 AMDHD2Q9Y303 409 aa7.09□□□□□ -1.27
TRAF3-205ENST00000558700 FLVCR1Q9Y5Y0 555 aa7.09□□□□□ -1.27
TRAF3-205ENST00000558700 CR1P17927 2039 aa7.09□□□□□ -1.27
TRAF3-205ENST00000558700 CADP27708 2225 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 ZANQ9Y493 2812 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 A0A096LPI6 279 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 ZC3H12DA2A288 527 aaKnown RBP7.08□□□□□ -1.28
TRAF3-205ENST00000558700 FAM234BA2RU67 622 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 AQP7P3A6NL99 342 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 INAFM1C9JVW0 142 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 M0R1B8 84 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 UBDO15205 165 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 GSTA4O15217 222 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 FRS3O43559 492 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 RAMP1O60894 148 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 IGHV4-39P01824 125 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 ITGA5P08648 1049 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 ETFAP13804 333 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 NCF2P19878 526 aaPredicted RBP7.08□□□□□ -1.28
TRAF3-205ENST00000558700 CXCR1P25024 350 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 PTAFRP25105 342 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 ACVR1BP36896 505 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 POLR2JP52435 117 aaKnown RBP7.08□□□□□ -1.28
TRAF3-205ENST00000558700 NUDT6P53370 316 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 STX1BP61266 288 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 MAGOHP61326 146 aaKnown RBP7.08□□□□□ -1.28
TRAF3-205ENST00000558700 H3F3AP84243 136 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 SPOCK1Q08629 439 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 SLC17A1Q14916 467 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 GABRA6Q16445 453 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 C6orf10Q5SRN2 563 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 OTUD3Q5T2D3 398 aaPredicted RBP7.08□□□□□ -1.28
TRAF3-205ENST00000558700 WBP2NLQ6ICG8 309 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 VRK2Q86Y07 508 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 FBXL14Q8N1E6 418 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 CADM2Q8N3J6 435 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 OR52E4Q8NGH9 312 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 FBLIM1Q8WUP2 373 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 ADAD1Q96M93 576 aaKnown RBP7.08□□□□□ -1.28
TRAF3-205ENST00000558700 SF3B5Q9BWJ5 86 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms