RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 YAP1P46937 504 aaKnown RBP10.96□□□□□ -0.65
SMAD3-205ENST00000558428 OR3A2P47893 321 aa10.96□□□□□ -0.65
SMAD3-205ENST00000558428 P2RY4P51582 365 aa10.96□□□□□ -0.65
SMAD3-205ENST00000558428 FOXD4Q12950 439 aaPredicted RBP10.96□□□□□ -0.65
SMAD3-205ENST00000558428 MFSD13AQ14CX5 517 aa10.96□□□□□ -0.65
SMAD3-205ENST00000558428 FXNQ16595 210 aa10.96□□□□□ -0.65
SMAD3-205ENST00000558428 SPATS1Q496A3 300 aa10.96□□□□□ -0.65
SMAD3-205ENST00000558428 NKAIN4Q8IVV8 208 aa10.96□□□□□ -0.65
SMAD3-205ENST00000558428 ZNF295-AS1Q8N0V1 137 aa10.96□□□□□ -0.65
SMAD3-205ENST00000558428 C10orf53Q8N6V4 93 aa10.96□□□□□ -0.65
SMAD3-205ENST00000558428 OR9K2Q8NGE7 335 aa10.96□□□□□ -0.65
SMAD3-205ENST00000558428 OR6S1Q8NH40 331 aa10.96□□□□□ -0.65
SMAD3-205ENST00000558428 ZNF417Q8TAU3 575 aa10.96□□□□□ -0.65
SMAD3-205ENST00000558428 PRRC1Q96M27 445 aa10.96□□□□□ -0.65
SMAD3-205ENST00000558428 ZNF587Q96SQ5 575 aaPredicted RBP10.96□□□□□ -0.65
SMAD3-205ENST00000558428 PRSS27Q9BQR3 290 aa10.96□□□□□ -0.65
SMAD3-205ENST00000558428 SF3B5Q9BWJ5 86 aaKnown RBP10.96□□□□□ -0.65
SMAD3-205ENST00000558428 AMBRA1Q9C0C7 1298 aa10.96□□□□□ -0.65
SMAD3-205ENST00000558428 GORASP2Q9H8Y8 452 aa10.96□□□□□ -0.65
SMAD3-205ENST00000558428 DCAF13Q9NV06 445 aaKnown RBP10.96□□□□□ -0.65
SMAD3-205ENST00000558428 SEC14L4Q9UDX3 406 aa10.96□□□□□ -0.65
SMAD3-205ENST00000558428 SAMD4AQ9UPU9 718 aaKnown RBP10.96□□□□□ -0.65
SMAD3-205ENST00000558428 RASD1Q9Y272 281 aa10.96□□□□□ -0.65
SMAD3-205ENST00000558428 SNX13Q9Y5W8 968 aa10.96□□□□□ -0.65
SMAD3-205ENST00000558428 ITPR2Q14571 2701 aa10.96□□□□□ -0.66
SMAD3-205ENST00000558428 ABCA12Q86UK0 2595 aa10.96□□□□□ -0.66
SMAD3-205ENST00000558428 SH3D21A4FU49 640 aa10.95□□□□□ -0.66
SMAD3-205ENST00000558428 LRRN3E7EW58 273 aa10.95□□□□□ -0.66
SMAD3-205ENST00000558428 C16orf97H3BN30 126 aa10.95□□□□□ -0.66
SMAD3-205ENST00000558428 J3KTA2 159 aa10.95□□□□□ -0.66
SMAD3-205ENST00000558428 KPNA4O00629 521 aaPredicted RBP10.95□□□□□ -0.66
SMAD3-205ENST00000558428 ARPC2O15144 300 aa10.95□□□□□ -0.66
SMAD3-205ENST00000558428 FZD7O75084 574 aa10.95□□□□□ -0.66
SMAD3-205ENST00000558428 MRPL33O75394 65 aaKnown RBP10.95□□□□□ -0.66
SMAD3-205ENST00000558428 VAMP5O95183 116 aa10.95□□□□□ -0.66
SMAD3-205ENST00000558428 NQO1P15559 274 aaKnown RBP10.95□□□□□ -0.66
SMAD3-205ENST00000558428 EDNRAP25101 427 aa10.95□□□□□ -0.66
SMAD3-205ENST00000558428 SSTR2P30874 369 aa10.95□□□□□ -0.66
SMAD3-205ENST00000558428 CCKARP32238 428 aa10.95□□□□□ -0.66
SMAD3-205ENST00000558428 UGT2B10P36537 528 aa10.95□□□□□ -0.66
SMAD3-205ENST00000558428 PCYT1AP49585 367 aa10.95□□□□□ -0.66
SMAD3-205ENST00000558428 IL1RL1Q01638 556 aa10.95□□□□□ -0.66
SMAD3-205ENST00000558428 LTBQ06643 244 aa10.95□□□□□ -0.66
SMAD3-205ENST00000558428 ST3GAL3Q11203 375 aa10.95□□□□□ -0.66
SMAD3-205ENST00000558428 CASP12Q6UXS9 341 aa10.95□□□□□ -0.66
SMAD3-205ENST00000558428 H1FNTQ75WM6 255 aaPredicted RBP10.95□□□□□ -0.66
SMAD3-205ENST00000558428 ARHGAP24Q8N264 748 aa10.95□□□□□ -0.66
SMAD3-205ENST00000558428 KDM8Q8N371 416 aa10.95□□□□□ -0.66
SMAD3-205ENST00000558428 FAM222BQ8WU58 562 aa10.95□□□□□ -0.66
SMAD3-205ENST00000558428 TMEM255BQ8WV15 326 aa10.95□□□□□ -0.66
SMAD3-205ENST00000558428 APH1AQ96BI3 265 aa10.95□□□□□ -0.66
SMAD3-205ENST00000558428 NSMCE2Q96MF7 247 aa10.95□□□□□ -0.66
SMAD3-205ENST00000558428 MOGAT1Q96PD6 335 aa10.95□□□□□ -0.66
SMAD3-205ENST00000558428 ZNF426Q9BUY5 554 aa10.95□□□□□ -0.66
SMAD3-205ENST00000558428 ASPNQ9BXN1 380 aa10.95□□□□□ -0.66
SMAD3-205ENST00000558428 SLC19A3Q9BZV2 496 aa10.95□□□□□ -0.66
SMAD3-205ENST00000558428 C1orf21Q9H246 121 aa10.95□□□□□ -0.66
SMAD3-205ENST00000558428 TAS2R1Q9NYW7 299 aa10.95□□□□□ -0.66
SMAD3-205ENST00000558428 NDRG3Q9UGV2 375 aa10.95□□□□□ -0.66
SMAD3-205ENST00000558428 PRSS50Q9UI38 385 aa10.95□□□□□ -0.66
SMAD3-205ENST00000558428 A4GNTQ9UNA3 340 aa10.95□□□□□ -0.66
SMAD3-205ENST00000558428 CORINQ9Y5Q5 1042 aa10.95□□□□□ -0.66
SMAD3-205ENST00000558428 V9GYQ6 96 aa10.95□□□□□ -0.66
SMAD3-205ENST00000558428 CYSRT1A8MQ03 144 aa10.94□□□□□ -0.66
SMAD3-205ENST00000558428 CH25HO95992 272 aa10.94□□□□□ -0.66
SMAD3-205ENST00000558428 ADAP00813 363 aa10.94□□□□□ -0.66
SMAD3-205ENST00000558428 MT-ATP6P00846 226 aa10.94□□□□□ -0.66
SMAD3-205ENST00000558428 IGHV3-9P01782 118 aa10.94□□□□□ -0.66
SMAD3-205ENST00000558428 THRBP10828 461 aa10.94□□□□□ -0.66
SMAD3-205ENST00000558428 EPXP11678 715 aa10.94□□□□□ -0.66
SMAD3-205ENST00000558428 ZNF43P17038 809 aa10.94□□□□□ -0.66
SMAD3-205ENST00000558428 NTF4P34130 210 aa10.94□□□□□ -0.66
SMAD3-205ENST00000558428 RBM34P42696 430 aaKnown RBP10.94□□□□□ -0.66
SMAD3-205ENST00000558428 UGT2B15P54855 530 aa10.94□□□□□ -0.66
SMAD3-205ENST00000558428 TLE4Q04727 773 aa10.94□□□□□ -0.66
SMAD3-205ENST00000558428 ZNF74Q16587 644 aa10.94□□□□□ -0.66
SMAD3-205ENST00000558428 ANKRD34AQ69YU3 496 aa10.94□□□□□ -0.66
SMAD3-205ENST00000558428 STAC2Q6ZMT1 411 aa10.94□□□□□ -0.66
SMAD3-205ENST00000558428 CYP4Z1Q86W10 505 aa10.94□□□□□ -0.66
SMAD3-205ENST00000558428 CXorf67Q86X51 503 aaPredicted RBP10.94□□□□□ -0.66
SMAD3-205ENST00000558428 GABRG1Q8N1C3 465 aa10.94□□□□□ -0.66
SMAD3-205ENST00000558428 UBE2J2Q8N2K1 259 aa10.94□□□□□ -0.66
SMAD3-205ENST00000558428 FAM86B1Q8N7N1 296 aa10.94□□□□□ -0.66
SMAD3-205ENST00000558428 ADPRHL1Q8NDY3 354 aa10.94□□□□□ -0.66
SMAD3-205ENST00000558428 PFN4Q8NHR9 129 aa10.94□□□□□ -0.66
SMAD3-205ENST00000558428 TMEM239Q8WW34 195 aa10.94□□□□□ -0.66
SMAD3-205ENST00000558428 C14orf79Q96F83 325 aa10.94□□□□□ -0.66
SMAD3-205ENST00000558428 ZNF385AQ96PM9 386 aaKnown RBP10.94□□□□□ -0.66
SMAD3-205ENST00000558428 MED18Q9BUE0 208 aa10.94□□□□□ -0.66
SMAD3-205ENST00000558428 FNDC11Q9BVV2 318 aa10.94□□□□□ -0.66
SMAD3-205ENST00000558428 PARPBPQ9NWS1 579 aa10.94□□□□□ -0.66
SMAD3-205ENST00000558428 RHCGQ9UBD6 479 aa10.94□□□□□ -0.66
SMAD3-205ENST00000558428 PRPF19Q9UMS4 504 aaKnown RBP10.94□□□□□ -0.66
SMAD3-205ENST00000558428 B3GALT5Q9Y2C3 310 aa10.94□□□□□ -0.66
SMAD3-205ENST00000558428 ENO4A6NNW6 628 aa10.93□□□□□ -0.66
SMAD3-205ENST00000558428 PDE5AO76074 875 aa10.93□□□□□ -0.66
SMAD3-205ENST00000558428 CNOT4O95628 575 aaKnown RBP10.93□□□□□ -0.66
SMAD3-205ENST00000558428 MT-ND1P03886 318 aa10.93□□□□□ -0.66
SMAD3-205ENST00000558428 UMPSP11172 480 aa10.93□□□□□ -0.66
SMAD3-205ENST00000558428 PSMB1P20618 241 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 247.8 ms