RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 HOXB4P17483 251 aaPredicted RBP7.51□□□□□ -1.21
TPM1-213ENST00000558400 CD247P20963 164 aa7.51□□□□□ -1.21
TPM1-213ENST00000558400 PAX7P23759 505 aa7.51□□□□□ -1.21
TPM1-213ENST00000558400 HTR2AP28223 471 aa7.51□□□□□ -1.21
TPM1-213ENST00000558400 RPS5P46782 204 aaKnown RBP7.51□□□□□ -1.21
TPM1-213ENST00000558400 NR1H2P55055 460 aa7.51□□□□□ -1.21
TPM1-213ENST00000558400 KRTAP10-9P60411 292 aa7.51□□□□□ -1.21
TPM1-213ENST00000558400 SELENOWP63302 87 aa7.51□□□□□ -1.21
TPM1-213ENST00000558400 EGR4Q05215 589 aa7.51□□□□□ -1.21
TPM1-213ENST00000558400 POU4F3Q15319 338 aa7.51□□□□□ -1.21
TPM1-213ENST00000558400 BEX5Q5H9J7 111 aa7.51□□□□□ -1.21
TPM1-213ENST00000558400 ANKRD34AQ69YU3 496 aa7.51□□□□□ -1.21
TPM1-213ENST00000558400 TTC33Q6PID6 262 aaPredicted RBP7.51□□□□□ -1.21
TPM1-213ENST00000558400 LINC00114Q6XXX2 140 aa7.51□□□□□ -1.21
TPM1-213ENST00000558400 SPNS3Q6ZMD2 512 aa7.51□□□□□ -1.21
TPM1-213ENST00000558400 H1FNTQ75WM6 255 aaPredicted RBP7.51□□□□□ -1.21
TPM1-213ENST00000558400 GPAT4Q86UL3 456 aa7.51□□□□□ -1.21
TPM1-213ENST00000558400 CXorf67Q86X51 503 aaPredicted RBP7.51□□□□□ -1.21
TPM1-213ENST00000558400 CDC20BQ86Y33 519 aa7.51□□□□□ -1.21
TPM1-213ENST00000558400 ANKS4BQ8N8V4 417 aa7.51□□□□□ -1.21
TPM1-213ENST00000558400 POMGNT2Q8NAT1 580 aa7.51□□□□□ -1.21
TPM1-213ENST00000558400 GPR32P1Q8NGA4 272 aa7.51□□□□□ -1.21
TPM1-213ENST00000558400 OR6T1Q8NGN1 323 aa7.51□□□□□ -1.21
TPM1-213ENST00000558400 NINJ1Q92982 152 aa7.51□□□□□ -1.21
TPM1-213ENST00000558400 TAMM41Q96BW9 452 aa7.51□□□□□ -1.21
TPM1-213ENST00000558400 SLC25A36Q96CQ1 311 aa7.51□□□□□ -1.21
TPM1-213ENST00000558400 OXGR1Q96P68 337 aa7.51□□□□□ -1.21
TPM1-213ENST00000558400 ZNF300Q96RE9 604 aaPredicted RBP7.51□□□□□ -1.21
TPM1-213ENST00000558400 RSPO3Q9BXY4 272 aaPredicted RBP7.51□□□□□ -1.21
TPM1-213ENST00000558400 SLC19A3Q9BZV2 496 aa7.51□□□□□ -1.21
TPM1-213ENST00000558400 ACTR6Q9GZN1 396 aa7.51□□□□□ -1.21
TPM1-213ENST00000558400 PCDHAC1Q9H158 963 aa7.51□□□□□ -1.21
TPM1-213ENST00000558400 NDE1Q9NXR1 346 aa7.51□□□□□ -1.21
TPM1-213ENST00000558400 C6orf203Q9P0P8 240 aaPredicted RBP7.51□□□□□ -1.21
TPM1-213ENST00000558400 UPB1Q9UBR1 384 aa7.51□□□□□ -1.21
TPM1-213ENST00000558400 ITGB1BP2Q9UKP3 347 aa7.51□□□□□ -1.21
TPM1-213ENST00000558400 SH3GLB1Q9Y371 365 aa7.51□□□□□ -1.21
TPM1-213ENST00000558400 FLVCR1Q9Y5Y0 555 aa7.51□□□□□ -1.21
TPM1-213ENST00000558400 CIB4A0PJX0 185 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 CCT8L1PA6NM43 557 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 FTCDNL1E5RQL4 147 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 TPST2O60704 377 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 FZD7O75084 574 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 OPN1SWP03999 348 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 THRBP10828 461 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 GGT1P19440 569 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 NUDT2P50583 147 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 GYS2P54840 703 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 CDH12P55289 794 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 LIPEQ05469 1076 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 C1DQ13901 141 aaKnown RBP7.5□□□□□ -1.21
TPM1-213ENST00000558400 TESK1Q15569 626 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 NPTX1Q15818 432 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 SPATS1Q496A3 300 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 ENTPD8Q5MY95 495 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 TIMM23BQ5SRD1 257 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 GKAP1Q5VSY0 366 aaPredicted RBP7.5□□□□□ -1.21
TPM1-213ENST00000558400 C8orf82Q6P1X6 216 aaPredicted RBP7.5□□□□□ -1.21
TPM1-213ENST00000558400 CREB3L2Q70SY1 520 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 BHLHA15Q7RTS1 189 aaPredicted RBP7.5□□□□□ -1.21
TPM1-213ENST00000558400 AAED1Q7RTV5 226 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 CDH24Q86UP0 819 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 COMTD1Q86VU5 262 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 TREML1Q86YW5 311 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 SCAIQ8N9R8 606 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 ADPRHL1Q8NDY3 354 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 OR9K2Q8NGE7 335 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 ADAMTS16Q8TE57 1224 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 NANOS1Q8WY41 292 aaKnown RBP7.5□□□□□ -1.21
TPM1-213ENST00000558400 TAAR8Q969N4 342 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 KTI12Q96EK9 354 aaPredicted RBP7.5□□□□□ -1.21
TPM1-213ENST00000558400 DNAJA3Q96EY1 480 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 ZC3HAV1LQ96H79 300 aaKnown RBP7.5□□□□□ -1.21
TPM1-213ENST00000558400 HS6ST2Q96MM7 605 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 CCT8L2Q96SF2 557 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 PRR14Q9BWN1 585 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 ASPNQ9BXN1 380 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 ALG2Q9H553 416 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 SPAG4Q9NPE6 437 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 CMTM6Q9NX76 183 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 TAS2R16Q9NYV7 291 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 MALT1Q9UDY8 824 aa7.5□□□□□ -1.21
TPM1-213ENST00000558400 DEFB108AA8MXU0 73 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 M0R3H8 397 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 CXCR6O00574 342 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 KLF4O43474 513 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 AKAP8O43823 692 aaKnown RBP7.49□□□□□ -1.21
TPM1-213ENST00000558400 RAMP1O60894 148 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 KRT33AO76009 404 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 OR5F1O95221 314 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 FAM107AO95990 144 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 IGF2P01344 180 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 HIST1H2ABP04908 130 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 KLK2P20151 261 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 COX5AP20674 150 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 DNASE1P24855 282 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 MPGP29372 298 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 GRPRP30550 384 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 DNAJA1P31689 397 aaKnown RBP7.49□□□□□ -1.21
TPM1-213ENST00000558400 CCKARP32238 428 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms