RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 NECAB1Q8N987 351 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 ANGPTL6Q8NI99 470 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 NDNFQ8TB73 568 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 SLC2A14Q8TDB8 520 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 PAQR8Q8TEZ7 354 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 CAPSLQ8WWF8 208 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 FCGR1BQ92637 280 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 TNFRSF14Q92956 283 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 NEIL2Q969S2 332 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 FGGYQ96C11 551 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 SLC41A3Q96GZ6 507 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 TMEM80Q96HE8 168 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 C4orf36Q96KX1 117 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 PPP1R36Q96LQ0 422 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 IL4I1Q96RQ9 567 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 CHP1Q99653 195 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 ACBD6Q9BR61 282 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 FTHL17Q9BXU8 183 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 NDEL1Q9GZM8 345 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 SIRPDQ9H106 197 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 TDRD3Q9H7E2 651 aaKnown RBP2.21□□□□□ -2.06
SPG11-206ENST00000558093 ROPN1Q9HAT0 212 aaPredicted RBP2.21□□□□□ -2.06
SPG11-206ENST00000558093 VAT1LQ9HCJ6 419 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 YAE1D1Q9NRH1 226 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 CNOT2Q9NZN8 540 aaKnown RBP2.21□□□□□ -2.06
SPG11-206ENST00000558093 GCNT4Q9P109 453 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 PEF1Q9UBV8 284 aaKnown RBP2.21□□□□□ -2.06
SPG11-206ENST00000558093 ZNF221Q9UK13 617 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 ZNF490Q9ULM2 529 aaPredicted RBP2.21□□□□□ -2.06
SPG11-206ENST00000558093 MGAT4BQ9UQ53 548 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 PPIAL4AQ9Y536 164 aa2.21□□□□□ -2.06
SPG11-206ENST00000558093 TTC21AQ8NDW8 1320 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 A0A0U1RQV5 110 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 SMIM28A0A1B0GU29 152 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 A0A1B0GUL7 405 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 LOC105371267A0A1B0GV96 52 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 TMEM210A6NLX4 147 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 OR5K4A6NMS3 321 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 TCP11X1B4DZS4 312 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 GOLGA8KD6RF30 607 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 E9PMD0 336 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 TEX46H3BTG2 121 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 PANO1I0J062 215 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 FOXE1O00358 373 aaPredicted RBP2.2□□□□□ -2.06
SPG11-206ENST00000558093 POLR1CO15160 346 aaPredicted RBP2.2□□□□□ -2.06
SPG11-206ENST00000558093 EIF3HO15372 352 aaKnown RBP eCLIP2.2□□□□□ -2.06
SPG11-206ENST00000558093 LATO43561 262 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 CALUO43852 315 aaPredicted RBP2.2□□□□□ -2.06
SPG11-206ENST00000558093 CA11O75493 328 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 TOXO94900 526 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 MBD3O95983 291 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 CXCL10P02778 98 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 CD55P08174 381 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 STSP08842 583 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 ALOX5P09917 674 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 VDAC1P21796 283 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 PCMT1P22061 227 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 MSNP26038 577 aaKnown RBP2.2□□□□□ -2.06
SPG11-206ENST00000558093 FDFT1P37268 417 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 SLC6A8P48029 635 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 CSNK1EP49674 416 aaKnown RBP2.2□□□□□ -2.06
SPG11-206ENST00000558093 RGS4P49798 205 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 PSMD7P51665 324 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 CNTN2Q02246 1040 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 HSF2Q03933 536 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 FADDQ13158 208 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 MAB21L1Q13394 359 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 ELAVL3Q14576 367 aaKnown RBP2.2□□□□□ -2.06
SPG11-206ENST00000558093 KCNJ11Q14654 390 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 PDK3Q15120 406 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 SGCAQ16586 387 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 MOGQ16653 247 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 CYBRD1Q53TN4 286 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 TMEM31Q5JXX7 168 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 SPANXN2Q5MJ10 180 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 DCST2Q5T1A1 773 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 ATF7IP2Q5U623 682 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 C1orf94Q6P1W5 598 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 VTCN1Q7Z7D3 282 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 ZNF589Q86UQ0 364 aaPredicted RBP2.2□□□□□ -2.06
SPG11-206ENST00000558093 MISPQ8IVT2 679 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 ITPRIPQ8IWB1 547 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 LRRC8AQ8IWT6 810 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 ALLCQ8N6M5 410 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 RNF148Q8N7C7 305 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 Q8N9L7 120 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 SNX31Q8N9S9 440 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 LINC01555Q8NAE3 123 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 STKLD1Q8NE28 680 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 TTLQ8NG68 377 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 OR9K2Q8NGE7 335 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 FAM81AQ8TBF8 368 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 LRRC20Q8TCA0 184 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 ART4Q93070 314 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 MCHR2Q969V1 340 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 HAVCR1Q96D42 359 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 PRRC1Q96M27 445 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 NOL4LQ96MY1 436 aaPredicted RBP2.2□□□□□ -2.06
SPG11-206ENST00000558093 TSNARE1Q96NA8 513 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 ZNF317Q96PQ6 595 aaPredicted RBP2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms