RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 ACTR6Q9GZN1 396 aa11.06□□□□□ -0.64
SLIRP-209ENST00000557342 CLEC4MQ9H2X3 399 aaPredicted RBP11.06□□□□□ -0.64
SLIRP-209ENST00000557342 ADA2Q9NZK5 511 aa11.06□□□□□ -0.64
SLIRP-209ENST00000557342 B3GALT5Q9Y2C3 310 aa11.06□□□□□ -0.64
SLIRP-209ENST00000557342 CORINQ9Y5Q5 1042 aa11.06□□□□□ -0.64
SLIRP-209ENST00000557342 UNC79Q9P2D8 2635 aa11.06□□□□□ -0.64
SLIRP-209ENST00000557342 CELSR2Q9HCU4 2923 aa11.05□□□□□ -0.64
SLIRP-209ENST00000557342 MT-ATP6P00846 226 aa11.05□□□□□ -0.64
SLIRP-209ENST00000557342 CRYGSP22914 178 aa11.05□□□□□ -0.64
SLIRP-209ENST00000557342 P2RY4P51582 365 aa11.05□□□□□ -0.64
SLIRP-209ENST00000557342 TAS2R41P59536 307 aa11.05□□□□□ -0.64
SLIRP-209ENST00000557342 KRTAP10-9P60411 292 aa11.05□□□□□ -0.64
SLIRP-209ENST00000557342 MXRA7P84157 204 aa11.05□□□□□ -0.64
SLIRP-209ENST00000557342 ANKRD34AQ69YU3 496 aa11.05□□□□□ -0.64
SLIRP-209ENST00000557342 C16orf89Q6UX73 402 aa11.05□□□□□ -0.64
SLIRP-209ENST00000557342 DEF8Q6ZN54 512 aa11.05□□□□□ -0.64
SLIRP-209ENST00000557342 CBLL1Q75N03 491 aa11.05□□□□□ -0.64
SLIRP-209ENST00000557342 H1FNTQ75WM6 255 aaPredicted RBP11.05□□□□□ -0.64
SLIRP-209ENST00000557342 SSX8Q7RTT4 187 aa11.05□□□□□ -0.64
SLIRP-209ENST00000557342 SCAIQ8N9R8 606 aa11.05□□□□□ -0.64
SLIRP-209ENST00000557342 ADPRHL1Q8NDY3 354 aa11.05□□□□□ -0.64
SLIRP-209ENST00000557342 FAM162AQ96A26 154 aa11.05□□□□□ -0.64
SLIRP-209ENST00000557342 SLC41A3Q96GZ6 507 aa11.05□□□□□ -0.64
SLIRP-209ENST00000557342 ZC3HAV1LQ96H79 300 aaKnown RBP11.05□□□□□ -0.64
SLIRP-209ENST00000557342 OXGR1Q96P68 337 aa11.05□□□□□ -0.64
SLIRP-209ENST00000557342 SLC19A3Q9BZV2 496 aa11.05□□□□□ -0.64
SLIRP-209ENST00000557342 ARL8BQ9NVJ2 186 aa11.05□□□□□ -0.64
SLIRP-209ENST00000557342 ASB6Q9NWX5 421 aa11.05□□□□□ -0.64
SLIRP-209ENST00000557342 UPB1Q9UBR1 384 aa11.05□□□□□ -0.64
SLIRP-209ENST00000557342 RPS6KA6Q9UK32 745 aa11.05□□□□□ -0.64
SLIRP-209ENST00000557342 SLC7A7Q9UM01 511 aa11.05□□□□□ -0.64
SLIRP-209ENST00000557342 EDARQ9UNE0 448 aa11.05□□□□□ -0.64
SLIRP-209ENST00000557342 OR6C65A6NJZ3 312 aa11.04□□□□□ -0.64
SLIRP-209ENST00000557342 M0R082 166 aa11.04□□□□□ -0.64
SLIRP-209ENST00000557342 OR5F1O95221 314 aa11.04□□□□□ -0.64
SLIRP-209ENST00000557342 BGLAPP02818 100 aa11.04□□□□□ -0.64
SLIRP-209ENST00000557342 HRGP04196 525 aa11.04□□□□□ -0.64
SLIRP-209ENST00000557342 THRBP10828 461 aa11.04□□□□□ -0.64
SLIRP-209ENST00000557342 NQO1P15559 274 aaKnown RBP11.04□□□□□ -0.64
SLIRP-209ENST00000557342 ZNF43P17038 809 aa11.04□□□□□ -0.64
SLIRP-209ENST00000557342 GGT1P19440 569 aa11.04□□□□□ -0.64
SLIRP-209ENST00000557342 TNFRSF1BP20333 461 aa11.04□□□□□ -0.64
SLIRP-209ENST00000557342 COX5AP20674 150 aa11.04□□□□□ -0.64
SLIRP-209ENST00000557342 IGHV1-2P23083 117 aa11.04□□□□□ -0.64
SLIRP-209ENST00000557342 GRPRP30550 384 aa11.04□□□□□ -0.64
SLIRP-209ENST00000557342 RBM34P42696 430 aaKnown RBP11.04□□□□□ -0.64
SLIRP-209ENST00000557342 OR1E2P47887 323 aa11.04□□□□□ -0.64
SLIRP-209ENST00000557342 IFI44LQ53G44 452 aa11.04□□□□□ -0.64
SLIRP-209ENST00000557342 CREB3L2Q70SY1 520 aa11.04□□□□□ -0.64
SLIRP-209ENST00000557342 BHLHA15Q7RTS1 189 aaPredicted RBP11.04□□□□□ -0.64
SLIRP-209ENST00000557342 AAED1Q7RTV5 226 aa11.04□□□□□ -0.64
SLIRP-209ENST00000557342 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.04□□□□□ -0.64
SLIRP-209ENST00000557342 ABHD12BQ7Z5M8 362 aaPredicted RBP11.04□□□□□ -0.64
SLIRP-209ENST00000557342 P3H2Q8IVL5 708 aa11.04□□□□□ -0.64
SLIRP-209ENST00000557342 C10orf53Q8N6V4 93 aa11.04□□□□□ -0.64
SLIRP-209ENST00000557342 POMGNT2Q8NAT1 580 aa11.04□□□□□ -0.64
SLIRP-209ENST00000557342 ZNF417Q8TAU3 575 aa11.04□□□□□ -0.64
SLIRP-209ENST00000557342 GEMIN6Q8WXD5 167 aaKnown RBP11.04□□□□□ -0.64
SLIRP-209ENST00000557342 HSD17B8Q92506 261 aa11.04□□□□□ -0.64
SLIRP-209ENST00000557342 S100PBPQ96BU1 408 aa11.04□□□□□ -0.64
SLIRP-209ENST00000557342 ZNF587Q96SQ5 575 aaPredicted RBP11.04□□□□□ -0.64
SLIRP-209ENST00000557342 MRPL39Q9NYK5 338 aaKnown RBP11.04□□□□□ -0.64
SLIRP-209ENST00000557342 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.04□□□□□ -0.64
SLIRP-209ENST00000557342 GMPR2Q9P2T1 348 aaKnown RBP11.04□□□□□ -0.64
SLIRP-209ENST00000557342 MALT1Q9UDY8 824 aa11.04□□□□□ -0.64
SLIRP-209ENST00000557342 ANKHD1Q8IWZ3 2542 aaKnown RBP11.04□□□□□ -0.64
SLIRP-209ENST00000557342 LOC102725191A0A1B0GVB3 256 aa11.03□□□□□ -0.64
SLIRP-209ENST00000557342 AKAP8O43823 692 aaKnown RBP11.03□□□□□ -0.64
SLIRP-209ENST00000557342 LYPD3O95274 346 aa11.03□□□□□ -0.64
SLIRP-209ENST00000557342 ZNF682O95780 498 aa11.03□□□□□ -0.64
SLIRP-209ENST00000557342 SERPINA1P01009 418 aa11.03□□□□□ -0.64
SLIRP-209ENST00000557342 IGHV3-9P01782 118 aa11.03□□□□□ -0.64
SLIRP-209ENST00000557342 THY1P04216 161 aa11.03□□□□□ -0.64
SLIRP-209ENST00000557342 IFNW1P05000 195 aa11.03□□□□□ -0.64
SLIRP-209ENST00000557342 HSD17B1P14061 328 aa11.03□□□□□ -0.64
SLIRP-209ENST00000557342 CBLP22681 906 aa11.03□□□□□ -0.64
SLIRP-209ENST00000557342 EDNRAP25101 427 aa11.03□□□□□ -0.64
SLIRP-209ENST00000557342 NTF4P34130 210 aa11.03□□□□□ -0.64
SLIRP-209ENST00000557342 IL1RL1Q01638 556 aa11.03□□□□□ -0.64
SLIRP-209ENST00000557342 ST3GAL3Q11203 375 aa11.03□□□□□ -0.64
SLIRP-209ENST00000557342 FAPQ12884 760 aa11.03□□□□□ -0.64
SLIRP-209ENST00000557342 C1DQ13901 141 aaKnown RBP11.03□□□□□ -0.64
SLIRP-209ENST00000557342 SPATS1Q496A3 300 aa11.03□□□□□ -0.64
SLIRP-209ENST00000557342 SAMD4BQ5PRF9 694 aaKnown RBP11.03□□□□□ -0.64
SLIRP-209ENST00000557342 GLYATQ6IB77 296 aa11.03□□□□□ -0.64
SLIRP-209ENST00000557342 FKBP9P1Q75LS8 142 aa11.03□□□□□ -0.64
SLIRP-209ENST00000557342 P2RY8Q86VZ1 359 aa11.03□□□□□ -0.64
SLIRP-209ENST00000557342 LSRQ86X29 649 aaPredicted RBP11.03□□□□□ -0.64
SLIRP-209ENST00000557342 CDC20BQ86Y33 519 aa11.03□□□□□ -0.64
SLIRP-209ENST00000557342 FITM2Q8N6M3 262 aa11.03□□□□□ -0.64
SLIRP-209ENST00000557342 ZIC4Q8N9L1 334 aa11.03□□□□□ -0.64
SLIRP-209ENST00000557342 NSL1Q96IY1 281 aa11.03□□□□□ -0.64
SLIRP-209ENST00000557342 PRRC1Q96M27 445 aa11.03□□□□□ -0.64
SLIRP-209ENST00000557342 HS6ST2Q96MM7 605 aa11.03□□□□□ -0.64
SLIRP-209ENST00000557342 ZNF385AQ96PM9 386 aaKnown RBP11.03□□□□□ -0.64
SLIRP-209ENST00000557342 ZNF426Q9BUY5 554 aa11.03□□□□□ -0.64
SLIRP-209ENST00000557342 SLCO5A1Q9H2Y9 848 aa11.03□□□□□ -0.64
SLIRP-209ENST00000557342 NGBQ9NPG2 151 aa11.03□□□□□ -0.64
SLIRP-209ENST00000557342 TAS2R16Q9NYV7 291 aa11.03□□□□□ -0.64
SLIRP-209ENST00000557342 EGFL7Q9UHF1 273 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms