RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 LRRN3Q9H3W5 708 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 SLC25A19Q9HC21 320 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 ACOT13Q9NPJ3 140 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 NECTIN3Q9NQS3 549 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 PNO1Q9NRX1 252 aaKnown RBP4.07□□□□□ -1.76
SRP54-212ENST00000556992 MED17Q9NVC6 651 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 PAK1IP1Q9NWT1 392 aaPredicted RBP4.07□□□□□ -1.76
SRP54-212ENST00000556992 CHCHD3Q9NX63 227 aaKnown RBP4.07□□□□□ -1.76
SRP54-212ENST00000556992 IL20Q9NYY1 176 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 TVP23BQ9NYZ1 205 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 RPS6KB2Q9UBS0 482 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 COPS7AQ9UBW8 275 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 AASSQ9UDR5 926 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 RARRES3Q9UL19 164 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 SLC7A7Q9UM01 511 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 ERVK-19Q9WJR5 959 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 ERGIC3Q9Y282 383 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 SLC35A3Q9Y2D2 325 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 MED31Q9Y3C7 131 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 CLDN16Q9Y5I7 305 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 MAU2Q9Y6X3 613 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 ZNF318Q5VUA4 2279 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 CEP295Q9C0D2 2601 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 SCN8AQ9UQD0 1980 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 IGHV5-10-1A0A0J9YXX1 117 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 C2orf92A0A1B0GVN3 265 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 OR2W5A6NFC9 320 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 TMEM221A6NGB7 291 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 FRG2CA6NGY1 282 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 CLDN24A6NM45 220 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 EFCAB9A8MZ26 197 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 H3BMQ9 156 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 M0R296 226 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 PEX12O00623 359 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 TO15178 435 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 SLC22A1O15245 554 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 FRS3O43559 492 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 HCN1O60741 890 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 BCAS1O75363 584 aaPredicted RBP4.06□□□□□ -1.76
SRP54-212ENST00000556992 PTP4A3O75365 173 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 INMTO95050 263 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 FADS2O95864 444 aaKnown RBP4.06□□□□□ -1.76
SRP54-212ENST00000556992 DDAH2O95865 285 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 BCL10O95999 233 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 CSTAP01040 98 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 PDGFBP01127 241 aaPredicted RBP4.06□□□□□ -1.76
SRP54-212ENST00000556992 IGKV1D-16P01601 117 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 MT-ND2P03891 347 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 IGKV3-11P04433 115 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 HEXBP07686 556 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 NGFRP08138 427 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 CYC1P08574 325 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 STSP08842 583 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 GKN3PP0CG01 181 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 PNMTP11086 282 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 MYF5P13349 255 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 PRG2P13727 222 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 TBXA2RP21731 343 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 PSMB9P28065 219 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 ACAA2P42765 397 aaKnown RBP4.06□□□□□ -1.76
SRP54-212ENST00000556992 MAP2K4P45985 399 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 SLC15A1P46059 708 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 RFX3P48380 749 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 GPR143P51810 404 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 CTBP2P56545 445 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 TUBA1BP68363 451 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 RHAGQ02094 409 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.06□□□□□ -1.76
SRP54-212ENST00000556992 RAB40BQ12829 278 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 TCF15Q12870 199 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 SRSF5Q13243 272 aaKnown RBP4.06□□□□□ -1.76
SRP54-212ENST00000556992 TMED1Q13445 227 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 FGFBP1Q14512 234 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 IRF3Q14653 427 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 ETFDHQ16134 617 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 NKAIN1Q4KMZ8 207 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 PDZK1Q5T2W1 519 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 MRPL2Q5T653 305 aaKnown RBP4.06□□□□□ -1.76
SRP54-212ENST00000556992 ARHGAP40Q5TG30 622 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 C1orf189Q5VU69 101 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 FCRLBQ6BAA4 426 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 ACSM5Q6NUN0 579 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 GUSBP11Q6P575 273 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 LINC00299Q6ZSB3 139 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 SEM1Q6ZVN7 128 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 TUBA1AQ71U36 451 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 SLC29A4Q7RTT9 530 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 CROCCP3Q8IVE0 287 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 NKAIN4Q8IVV8 208 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 NRMQ8IXM6 262 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 METTL27Q8N6F8 245 aaPredicted RBP4.06□□□□□ -1.76
SRP54-212ENST00000556992 TCEANCQ8N8B7 351 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 C17orf47Q8NEP4 570 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 PROKR2Q8NFJ6 384 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 OR2T33Q8NG76 320 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 OR4N2Q8NGD1 307 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 OR4C3Q8NH37 302 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 WDR36Q8NI36 951 aaKnown RBP4.06□□□□□ -1.76
SRP54-212ENST00000556992 TMEM163Q8TC26 289 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 SLC2A12Q8TD20 617 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms