RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 CASP12Q6UXS9 341 aa20.22■□□□□ 0.83
TDP1-216ENST00000556867 LINC00114Q6XXX2 140 aa20.22■□□□□ 0.83
TDP1-216ENST00000556867 TSPYL5Q86VY4 417 aaPredicted RBP20.22■□□□□ 0.83
TDP1-216ENST00000556867 P3H2Q8IVL5 708 aa20.22■□□□□ 0.83
TDP1-216ENST00000556867 KISS1RQ969F8 398 aaPredicted RBP20.22■□□□□ 0.83
TDP1-216ENST00000556867 PARPBPQ9NWS1 579 aa20.22■□□□□ 0.83
TDP1-216ENST00000556867 MYO9AB2RTY4 2548 aa20.21■□□□□ 0.83
TDP1-216ENST00000556867 DEFB108AA8MXU0 73 aa20.21■□□□□ 0.83
TDP1-216ENST00000556867 SIAH2O43255 324 aa20.21■□□□□ 0.83
TDP1-216ENST00000556867 FAM107AO95990 144 aa20.21■□□□□ 0.83
TDP1-216ENST00000556867 THY1P04216 161 aa20.21■□□□□ 0.83
TDP1-216ENST00000556867 THBDP07204 575 aa20.21■□□□□ 0.83
TDP1-216ENST00000556867 IL32P24001 234 aa20.21■□□□□ 0.83
TDP1-216ENST00000556867 MFSD13AQ14CX5 517 aa20.21■□□□□ 0.83
TDP1-216ENST00000556867 POU4F3Q15319 338 aa20.21■□□□□ 0.83
TDP1-216ENST00000556867 FBXW10Q5XX13 1052 aa20.21■□□□□ 0.83
TDP1-216ENST00000556867 GPAT4Q86UL3 456 aa20.21■□□□□ 0.83
TDP1-216ENST00000556867 CDH24Q86UP0 819 aa20.21■□□□□ 0.83
TDP1-216ENST00000556867 CDC20BQ86Y33 519 aa20.21■□□□□ 0.83
TDP1-216ENST00000556867 ZIC4Q8N9L1 334 aa20.21■□□□□ 0.83
TDP1-216ENST00000556867 S100PBPQ96BU1 408 aa20.21■□□□□ 0.83
TDP1-216ENST00000556867 ZC3HAV1LQ96H79 300 aaKnown RBP20.21■□□□□ 0.83
TDP1-216ENST00000556867 USB1Q9BQ65 265 aaKnown RBP20.21■□□□□ 0.83
TDP1-216ENST00000556867 SPAG4Q9NPE6 437 aa20.21■□□□□ 0.83
TDP1-216ENST00000556867 MALT1Q9UDY8 824 aa20.21■□□□□ 0.83
TDP1-216ENST00000556867 CXCR6O00574 342 aa20.2■□□□□ 0.82
TDP1-216ENST00000556867 SHOX2O60902 331 aaPredicted RBP20.2■□□□□ 0.82
TDP1-216ENST00000556867 TNFRSF1BP20333 461 aa20.2■□□□□ 0.82
TDP1-216ENST00000556867 TSC22D1Q15714 1073 aa20.2■□□□□ 0.82
TDP1-216ENST00000556867 WDR88Q6ZMY6 472 aa20.2■□□□□ 0.82
TDP1-216ENST00000556867 ADPRHL1Q8NDY3 354 aa20.2■□□□□ 0.82
TDP1-216ENST00000556867 MPP4Q96JB8 637 aa20.2■□□□□ 0.82
TDP1-216ENST00000556867 ZNF385AQ96PM9 386 aaKnown RBP20.2■□□□□ 0.82
TDP1-216ENST00000556867 POLR2J2Q9GZM3 115 aaKnown RBP20.2■□□□□ 0.82
TDP1-216ENST00000556867 POLR2J3Q9H1A7 115 aaKnown RBP20.2■□□□□ 0.82
TDP1-216ENST00000556867 C6orf203Q9P0P8 240 aaPredicted RBP20.2■□□□□ 0.82
TDP1-216ENST00000556867 TAGLN3Q9UI15 199 aa20.2■□□□□ 0.82
TDP1-216ENST00000556867 B3GALT5Q9Y2C3 310 aa20.2■□□□□ 0.82
TDP1-216ENST00000556867 M0R082 166 aa20.19■□□□□ 0.82
TDP1-216ENST00000556867 IGHV3-9P01782 118 aa20.19■□□□□ 0.82
TDP1-216ENST00000556867 BGLAPP02818 100 aa20.19■□□□□ 0.82
TDP1-216ENST00000556867 IGHV1-2P23083 117 aa20.19■□□□□ 0.82
TDP1-216ENST00000556867 GRPRP30550 384 aa20.19■□□□□ 0.82
TDP1-216ENST00000556867 SELENOWP63302 87 aa20.19■□□□□ 0.82
TDP1-216ENST00000556867 GKAP1Q5VSY0 366 aaPredicted RBP20.19■□□□□ 0.82
TDP1-216ENST00000556867 CREB3L2Q70SY1 520 aa20.19■□□□□ 0.82
TDP1-216ENST00000556867 BHLHA15Q7RTS1 189 aaPredicted RBP20.19■□□□□ 0.82
TDP1-216ENST00000556867 UBE2J2Q8N2K1 259 aa20.19■□□□□ 0.82
TDP1-216ENST00000556867 ZNF417Q8TAU3 575 aa20.19■□□□□ 0.82
TDP1-216ENST00000556867 LZICQ8WZA0 190 aa20.19■□□□□ 0.82
TDP1-216ENST00000556867 SLC41A3Q96GZ6 507 aa20.19■□□□□ 0.82
TDP1-216ENST00000556867 ZNF587Q96SQ5 575 aaPredicted RBP20.19■□□□□ 0.82
TDP1-216ENST00000556867 KCTD14Q9BQ13 255 aaPredicted RBP20.19■□□□□ 0.82
TDP1-216ENST00000556867 ZNF426Q9BUY5 554 aa20.19■□□□□ 0.82
TDP1-216ENST00000556867 ARL8BQ9NVJ2 186 aa20.19■□□□□ 0.82
TDP1-216ENST00000556867 SEC14L4Q9UDX3 406 aa20.19■□□□□ 0.82
TDP1-216ENST00000556867 SLC7A7Q9UM01 511 aa20.19■□□□□ 0.82
TDP1-216ENST00000556867 CORINQ9Y5Q5 1042 aa20.19■□□□□ 0.82
TDP1-216ENST00000556867 GSTA4O15217 222 aa20.18■□□□□ 0.82
TDP1-216ENST00000556867 LYZL6O75951 148 aa20.18■□□□□ 0.82
TDP1-216ENST00000556867 PTNP21246 168 aa20.18■□□□□ 0.82
TDP1-216ENST00000556867 DEF8Q6ZN54 512 aa20.18■□□□□ 0.82
TDP1-216ENST00000556867 H1FNTQ75WM6 255 aaPredicted RBP20.18■□□□□ 0.82
TDP1-216ENST00000556867 EPHX4Q8IUS5 362 aa20.18■□□□□ 0.82
TDP1-216ENST00000556867 SCAIQ8N9R8 606 aa20.18■□□□□ 0.82
TDP1-216ENST00000556867 NRGNQ92686 78 aa20.18■□□□□ 0.82
TDP1-216ENST00000556867 TPD52L3Q96J77 140 aa20.18■□□□□ 0.82
TDP1-216ENST00000556867 ASB6Q9NWX5 421 aa20.18■□□□□ 0.82
TDP1-216ENST00000556867 B3GAT1Q9P2W7 334 aa20.18■□□□□ 0.82
TDP1-216ENST00000556867 OR5F1O95221 314 aa20.17■□□□□ 0.82
TDP1-216ENST00000556867 OR1E2P47887 323 aa20.17■□□□□ 0.82
TDP1-216ENST00000556867 LTBQ06643 244 aa20.17■□□□□ 0.82
TDP1-216ENST00000556867 AAED1Q7RTV5 226 aa20.17■□□□□ 0.82
TDP1-216ENST00000556867 ZNF433Q8N7K0 673 aaPredicted RBP20.17■□□□□ 0.82
TDP1-216ENST00000556867 OXGR1Q96P68 337 aa20.17■□□□□ 0.82
TDP1-216ENST00000556867 MOGAT1Q96PD6 335 aa20.17■□□□□ 0.82
TDP1-216ENST00000556867 PRSS27Q9BQR3 290 aa20.17■□□□□ 0.82
TDP1-216ENST00000556867 ASPNQ9BXN1 380 aa20.17■□□□□ 0.82
TDP1-216ENST00000556867 SLC19A3Q9BZV2 496 aa20.17■□□□□ 0.82
TDP1-216ENST00000556867 SLC7A10Q9NS82 523 aa20.17■□□□□ 0.82
TDP1-216ENST00000556867 LOC102725191A0A1B0GVB3 256 aa20.16■□□□□ 0.82
TDP1-216ENST00000556867 A0A1W2PPR1 153 aa20.16■□□□□ 0.82
TDP1-216ENST00000556867 PDLIM1O00151 329 aa20.16■□□□□ 0.82
TDP1-216ENST00000556867 KLF4O43474 513 aa20.16■□□□□ 0.82
TDP1-216ENST00000556867 MT-ATP6P00846 226 aa20.16■□□□□ 0.82
TDP1-216ENST00000556867 GGT1P19440 569 aa20.16■□□□□ 0.82
TDP1-216ENST00000556867 CBLP22681 906 aa20.16■□□□□ 0.82
TDP1-216ENST00000556867 LOXP28300 417 aaPredicted RBP20.16■□□□□ 0.82
TDP1-216ENST00000556867 TAS2R41P59536 307 aa20.16■□□□□ 0.82
TDP1-216ENST00000556867 FAPQ12884 760 aa20.16■□□□□ 0.82
TDP1-216ENST00000556867 TAB1Q15750 504 aa20.16■□□□□ 0.82
TDP1-216ENST00000556867 BEX5Q5H9J7 111 aa20.16■□□□□ 0.82
TDP1-216ENST00000556867 TSPO2Q5TGU0 170 aa20.16■□□□□ 0.82
TDP1-216ENST00000556867 TTC33Q6PID6 262 aaPredicted RBP20.16■□□□□ 0.82
TDP1-216ENST00000556867 CBLL1Q75N03 491 aa20.16■□□□□ 0.82
TDP1-216ENST00000556867 WFDC8Q8IUA0 241 aa20.16■□□□□ 0.82
TDP1-216ENST00000556867 PGAM4Q8N0Y7 254 aa20.16■□□□□ 0.82
TDP1-216ENST00000556867 KDM8Q8N371 416 aa20.16■□□□□ 0.82
TDP1-216ENST00000556867 HSD17B8Q92506 261 aa20.16■□□□□ 0.82
TDP1-216ENST00000556867 PIK3IP1Q96FE7 263 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms