RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 RASSF2P50749 326 aa15.55■□□□□ 0.08
SHMT2-225ENST00000556798 P2RY4P51582 365 aa15.55■□□□□ 0.08
SHMT2-225ENST00000556798 MTX3Q5HYI7 312 aa15.55■□□□□ 0.08
SHMT2-225ENST00000556798 EEF1A1P5Q5VTE0 462 aa15.55■□□□□ 0.08
SHMT2-225ENST00000556798 GPAT4Q86UL3 456 aa15.55■□□□□ 0.08
SHMT2-225ENST00000556798 CYP4Z1Q86W10 505 aa15.55■□□□□ 0.08
SHMT2-225ENST00000556798 TMEM239Q8WW34 195 aa15.55■□□□□ 0.08
SHMT2-225ENST00000556798 PIGMQ9H3S5 423 aa15.55■□□□□ 0.08
SHMT2-225ENST00000556798 MEPEQ9NQ76 525 aaPredicted RBP15.55■□□□□ 0.08
SHMT2-225ENST00000556798 ADGRG4Q8IZF6 3080 aa15.54■□□□□ 0.08
SHMT2-225ENST00000556798 IGKV3D-15A0A087WSY6 115 aa15.54■□□□□ 0.08
SHMT2-225ENST00000556798 ENO4A6NNW6 628 aa15.54■□□□□ 0.08
SHMT2-225ENST00000556798 FZD7O75084 574 aa15.54■□□□□ 0.08
SHMT2-225ENST00000556798 STAMBPO95630 424 aa15.54■□□□□ 0.08
SHMT2-225ENST00000556798 CH25HO95992 272 aa15.54■□□□□ 0.08
SHMT2-225ENST00000556798 MT-ND1P03886 318 aa15.54■□□□□ 0.08
SHMT2-225ENST00000556798 EDNRAP25101 427 aa15.54■□□□□ 0.08
SHMT2-225ENST00000556798 UQCRC1P31930 480 aa15.54■□□□□ 0.08
SHMT2-225ENST00000556798 RBM34P42696 430 aaKnown RBP15.54■□□□□ 0.08
SHMT2-225ENST00000556798 LSM11P83369 360 aaKnown RBP eCLIP15.54■□□□□ 0.08
SHMT2-225ENST00000556798 SNTB1Q13884 538 aaKnown RBP15.54■□□□□ 0.08
SHMT2-225ENST00000556798 CCDC121Q6ZUS5 278 aa15.54■□□□□ 0.08
SHMT2-225ENST00000556798 KDM8Q8N371 416 aa15.54■□□□□ 0.08
SHMT2-225ENST00000556798 ZNF610Q8N9Z0 462 aa15.54■□□□□ 0.08
SHMT2-225ENST00000556798 LRGUKQ96M69 825 aa15.54■□□□□ 0.08
SHMT2-225ENST00000556798 RBM24Q9BX46 236 aaKnown RBP15.54■□□□□ 0.08
SHMT2-225ENST00000556798 LRMDAQ9H2I8 198 aa15.54■□□□□ 0.08
SHMT2-225ENST00000556798 GP6Q9HCN6 339 aa15.54■□□□□ 0.08
SHMT2-225ENST00000556798 CHST11Q9NPF2 352 aa15.54■□□□□ 0.08
SHMT2-225ENST00000556798 C20orf141Q9NUB4 165 aa15.54■□□□□ 0.08
SHMT2-225ENST00000556798 EMC3Q9P0I2 261 aa15.54■□□□□ 0.08
SHMT2-225ENST00000556798 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.54■□□□□ 0.08
SHMT2-225ENST00000556798 FAM32AQ9Y421 112 aaKnown RBP15.54■□□□□ 0.08
SHMT2-225ENST00000556798 ZNF724A8MTY0 619 aa15.53■□□□□ 0.08
SHMT2-225ENST00000556798 A8MXE2 369 aa15.53■□□□□ 0.08
SHMT2-225ENST00000556798 EBAG9O00559 213 aa15.53■□□□□ 0.08
SHMT2-225ENST00000556798 MSTNO14793 375 aa15.53■□□□□ 0.08
SHMT2-225ENST00000556798 FABP3P05413 133 aa15.53■□□□□ 0.08
SHMT2-225ENST00000556798 CD8BP10966 210 aa15.53■□□□□ 0.08
SHMT2-225ENST00000556798 RHCEP18577 417 aa15.53■□□□□ 0.08
SHMT2-225ENST00000556798 SLC16A1P53985 500 aa15.53■□□□□ 0.08
SHMT2-225ENST00000556798 TRAP1Q12931 704 aaKnown RBP15.53■□□□□ 0.08
SHMT2-225ENST00000556798 SLC17A1Q14916 467 aa15.53■□□□□ 0.08
SHMT2-225ENST00000556798 TRAM2Q15035 370 aa15.53■□□□□ 0.08
SHMT2-225ENST00000556798 PDK3Q15120 406 aa15.53■□□□□ 0.08
SHMT2-225ENST00000556798 ZNF74Q16587 644 aa15.53■□□□□ 0.08
SHMT2-225ENST00000556798 EXOC3L2Q2M3D2 409 aa15.53■□□□□ 0.08
SHMT2-225ENST00000556798 IQCCQ4KMZ1 466 aa15.53■□□□□ 0.08
SHMT2-225ENST00000556798 TMEM225Q6GV28 225 aa15.53■□□□□ 0.08
SHMT2-225ENST00000556798 ZNF474Q6S9Z5 364 aaPredicted RBP15.53■□□□□ 0.08
SHMT2-225ENST00000556798 GALNT5Q7Z7M9 940 aa15.53■□□□□ 0.08
SHMT2-225ENST00000556798 MEX3DQ86XN8 651 aaKnown RBP15.53■□□□□ 0.08
SHMT2-225ENST00000556798 LRRC17Q8N6Y2 441 aa15.53■□□□□ 0.08
SHMT2-225ENST00000556798 PIK3C3Q8NEB9 887 aa15.53■□□□□ 0.08
SHMT2-225ENST00000556798 OR9K2Q8NGE7 335 aa15.53■□□□□ 0.08
SHMT2-225ENST00000556798 OR6S1Q8NH40 331 aa15.53■□□□□ 0.08
SHMT2-225ENST00000556798 RNASE6Q93091 150 aaKnown RBP15.53■□□□□ 0.08
SHMT2-225ENST00000556798 TACO1Q9BSH4 297 aaKnown RBP15.53■□□□□ 0.08
SHMT2-225ENST00000556798 ASPNQ9BXN1 380 aa15.53■□□□□ 0.08
SHMT2-225ENST00000556798 SLC19A3Q9BZV2 496 aa15.53■□□□□ 0.08
SHMT2-225ENST00000556798 NMNAT1Q9HAN9 279 aaPredicted RBP15.53■□□□□ 0.08
SHMT2-225ENST00000556798 GALNT8Q9NY28 637 aa15.53■□□□□ 0.08
SHMT2-225ENST00000556798 SLC7A8Q9UHI5 535 aa15.53■□□□□ 0.08
SHMT2-225ENST00000556798 POMPQ9Y244 141 aa15.53■□□□□ 0.08
SHMT2-225ENST00000556798 MED31Q9Y3C7 131 aa15.53■□□□□ 0.08
SHMT2-225ENST00000556798 TESMINQ9Y4I5 508 aa15.53■□□□□ 0.08
SHMT2-225ENST00000556798 PKDREJQ9NTG1 2253 aa15.53■□□□□ 0.08
SHMT2-225ENST00000556798 H1F0P07305 194 aaKnown RBP15.52■□□□□ 0.08
SHMT2-225ENST00000556798 NQO1P15559 274 aaKnown RBP15.52■□□□□ 0.08
SHMT2-225ENST00000556798 NTF4P34130 210 aa15.52■□□□□ 0.08
SHMT2-225ENST00000556798 ERFP50548 548 aa15.52■□□□□ 0.08
SHMT2-225ENST00000556798 IL1RL1Q01638 556 aa15.52■□□□□ 0.08
SHMT2-225ENST00000556798 FLOT2Q14254 428 aa15.52■□□□□ 0.08
SHMT2-225ENST00000556798 MFSD13AQ14CX5 517 aa15.52■□□□□ 0.08
SHMT2-225ENST00000556798 FBXL19-AS1Q494R0 122 aa15.52■□□□□ 0.08
SHMT2-225ENST00000556798 FGD3Q5JSP0 725 aa15.52■□□□□ 0.08
SHMT2-225ENST00000556798 TFAP2EQ6VUC0 442 aa15.52■□□□□ 0.08
SHMT2-225ENST00000556798 H1FNTQ75WM6 255 aaPredicted RBP15.52■□□□□ 0.08
SHMT2-225ENST00000556798 SLC46A3Q7Z3Q1 461 aa15.52■□□□□ 0.08
SHMT2-225ENST00000556798 ZDHHC21Q8IVQ6 265 aa15.52■□□□□ 0.08
SHMT2-225ENST00000556798 HS6ST2Q96MM7 605 aa15.52■□□□□ 0.08
SHMT2-225ENST00000556798 ZNF385AQ96PM9 386 aaKnown RBP15.52■□□□□ 0.08
SHMT2-225ENST00000556798 PIP5K1AQ99755 562 aa15.52■□□□□ 0.08
SHMT2-225ENST00000556798 TRIM15Q9C019 465 aa15.52■□□□□ 0.08
SHMT2-225ENST00000556798 IL1RAPQ9NPH3 570 aa15.52■□□□□ 0.08
SHMT2-225ENST00000556798 PLSCR4Q9NRQ2 329 aa15.52■□□□□ 0.08
SHMT2-225ENST00000556798 B3GAT1Q9P2W7 334 aa15.52■□□□□ 0.08
SHMT2-225ENST00000556798 RASD1Q9Y272 281 aa15.52■□□□□ 0.08
SHMT2-225ENST00000556798 NOSIPQ9Y314 301 aaKnown RBP15.52■□□□□ 0.08
SHMT2-225ENST00000556798 CORINQ9Y5Q5 1042 aa15.52■□□□□ 0.08
SHMT2-225ENST00000556798 FLVCR1Q9Y5Y0 555 aa15.52■□□□□ 0.08
SHMT2-225ENST00000556798 GPR171O14626 319 aa15.51■□□□□ 0.07
SHMT2-225ENST00000556798 HPRP00739 348 aa15.51■□□□□ 0.07
SHMT2-225ENST00000556798 MT-ATP6P00846 226 aa15.51■□□□□ 0.07
SHMT2-225ENST00000556798 UMPSP11172 480 aa15.51■□□□□ 0.07
SHMT2-225ENST00000556798 ITGA2P17301 1181 aa15.51■□□□□ 0.07
SHMT2-225ENST00000556798 SPIBQ01892 262 aa15.51■□□□□ 0.07
SHMT2-225ENST00000556798 PMS2P3Q13401 168 aa15.51■□□□□ 0.07
SHMT2-225ENST00000556798 SP5Q6BEB4 398 aaPredicted RBP15.51■□□□□ 0.07
SHMT2-225ENST00000556798 TBPL2Q6SJ96 375 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms