RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 FAM26EQ8N5C1 309 aa15.56■□□□□ 0.08
TUBB3-211ENST00000556536 TMEM99Q8N816 258 aa15.56■□□□□ 0.08
TUBB3-211ENST00000556536 OR5K1Q8NHB7 308 aa15.56■□□□□ 0.08
TUBB3-211ENST00000556536 ZNF417Q8TAU3 575 aa15.56■□□□□ 0.08
TUBB3-211ENST00000556536 GIPC3Q8TF64 312 aa15.56■□□□□ 0.08
TUBB3-211ENST00000556536 ZNF587Q96SQ5 575 aaPredicted RBP15.56■□□□□ 0.08
TUBB3-211ENST00000556536 TP63Q9H3D4 680 aaPredicted RBP15.56■□□□□ 0.08
TUBB3-211ENST00000556536 FKRPQ9H9S5 495 aa15.56■□□□□ 0.08
TUBB3-211ENST00000556536 NANSQ9NR45 359 aa15.56■□□□□ 0.08
TUBB3-211ENST00000556536 PAQR5Q9NXK6 330 aaPredicted RBP15.56■□□□□ 0.08
TUBB3-211ENST00000556536 PDP1Q9P0J1 537 aaPredicted RBP15.56■□□□□ 0.08
TUBB3-211ENST00000556536 ZNF229Q9UJW7 825 aa15.56■□□□□ 0.08
TUBB3-211ENST00000556536 ZNF175Q9Y473 711 aa15.56■□□□□ 0.08
TUBB3-211ENST00000556536 TRGV8A0A0C4DH27 118 aa15.55■□□□□ 0.08
TUBB3-211ENST00000556536 HTR3EA5X5Y0 456 aa15.55■□□□□ 0.08
TUBB3-211ENST00000556536 SLC22A20A6NK97 555 aa15.55■□□□□ 0.08
TUBB3-211ENST00000556536 SAC3D1A6NKF1 404 aa15.55■□□□□ 0.08
TUBB3-211ENST00000556536 EFCAB9A8MZ26 197 aa15.55■□□□□ 0.08
TUBB3-211ENST00000556536 DNPH1O43598 174 aa15.55■□□□□ 0.08
TUBB3-211ENST00000556536 ASAH2BP0C7U1 165 aa15.55■□□□□ 0.08
TUBB3-211ENST00000556536 ANPEPP15144 967 aa15.55■□□□□ 0.08
TUBB3-211ENST00000556536 NSUN5P2Q63ZY6 315 aa15.55■□□□□ 0.08
TUBB3-211ENST00000556536 C1orf94Q6P1W5 598 aa15.55■□□□□ 0.08
TUBB3-211ENST00000556536 MAMDC2Q7Z304 686 aaPredicted RBP15.55■□□□□ 0.08
TUBB3-211ENST00000556536 CDK20Q8IZL9 346 aa15.55■□□□□ 0.08
TUBB3-211ENST00000556536 LINC00471Q8N535 108 aa15.55■□□□□ 0.08
TUBB3-211ENST00000556536 AQP11Q8NBQ7 271 aa15.55■□□□□ 0.08
TUBB3-211ENST00000556536 ICA1LQ8NDH6 482 aa15.55■□□□□ 0.08
TUBB3-211ENST00000556536 LIPHQ8WWY8 451 aa15.55■□□□□ 0.08
TUBB3-211ENST00000556536 NRBF2Q96F24 287 aa15.55■□□□□ 0.08
TUBB3-211ENST00000556536 PSMG3-AS1Q96PY0 264 aa15.55■□□□□ 0.08
TUBB3-211ENST00000556536 ASPNQ9BXN1 380 aa15.55■□□□□ 0.08
TUBB3-211ENST00000556536 CALHM2Q9HA72 323 aa15.55■□□□□ 0.08
TUBB3-211ENST00000556536 MCTS1Q9ULC4 181 aaKnown RBP15.55■□□□□ 0.08
TUBB3-211ENST00000556536 OAZ3Q9UMX2 235 aa15.55■□□□□ 0.08
TUBB3-211ENST00000556536 TMEM5Q9Y2B1 443 aa15.55■□□□□ 0.08
TUBB3-211ENST00000556536 DNAJC13O75165 2243 aa15.54■□□□□ 0.08
TUBB3-211ENST00000556536 NBPF19A0A087WUL8 3843 aa15.54■□□□□ 0.08
TUBB3-211ENST00000556536 CD8B2A6NJW9 211 aa15.54■□□□□ 0.08
TUBB3-211ENST00000556536 AQP7P3A6NL99 342 aa15.54■□□□□ 0.08
TUBB3-211ENST00000556536 EIF1BO60739 113 aaKnown RBP15.54■□□□□ 0.08
TUBB3-211ENST00000556536 SAGP10523 405 aaPredicted RBP15.54■□□□□ 0.08
TUBB3-211ENST00000556536 POU2F1P14859 743 aa15.54■□□□□ 0.08
TUBB3-211ENST00000556536 ZNF23P17027 643 aa15.54■□□□□ 0.08
TUBB3-211ENST00000556536 GTF2E2P29084 291 aaKnown RBP15.54■□□□□ 0.08
TUBB3-211ENST00000556536 PTGER4P35408 488 aa15.54■□□□□ 0.08
TUBB3-211ENST00000556536 IFNGR2P38484 337 aa15.54■□□□□ 0.08
TUBB3-211ENST00000556536 CA7P43166 264 aa15.54■□□□□ 0.08
TUBB3-211ENST00000556536 GSSP48637 474 aa15.54■□□□□ 0.08
TUBB3-211ENST00000556536 PMS2P3Q13401 168 aa15.54■□□□□ 0.08
TUBB3-211ENST00000556536 FHL1Q13642 323 aa15.54■□□□□ 0.08
TUBB3-211ENST00000556536 MFSD13AQ14CX5 517 aa15.54■□□□□ 0.08
TUBB3-211ENST00000556536 EIF2S3LQ2VIR3 472 aaKnown RBP15.54■□□□□ 0.08
TUBB3-211ENST00000556536 OTUD3Q5T2D3 398 aaPredicted RBP15.54■□□□□ 0.08
TUBB3-211ENST00000556536 PAQR6Q6TCH4 344 aa15.54■□□□□ 0.08
TUBB3-211ENST00000556536 NCCRP1Q6ZVX7 275 aaPredicted RBP15.54■□□□□ 0.08
TUBB3-211ENST00000556536 H1FNTQ75WM6 255 aaPredicted RBP15.54■□□□□ 0.08
TUBB3-211ENST00000556536 FCRLAQ7L513 359 aa15.54■□□□□ 0.08
TUBB3-211ENST00000556536 C9orf106Q8NAJ2 232 aa15.54■□□□□ 0.08
TUBB3-211ENST00000556536 OR13C2Q8NGS9 318 aa15.54■□□□□ 0.08
TUBB3-211ENST00000556536 OR5J2Q8NH18 312 aa15.54■□□□□ 0.08
TUBB3-211ENST00000556536 GNPDA2Q8TDQ7 276 aa15.54■□□□□ 0.08
TUBB3-211ENST00000556536 GTPBP3Q969Y2 492 aaKnown RBP15.54■□□□□ 0.08
TUBB3-211ENST00000556536 ZHX1-C8orf76Q96EF9 292 aa15.54■□□□□ 0.08
TUBB3-211ENST00000556536 FEVQ99581 238 aa15.54■□□□□ 0.08
TUBB3-211ENST00000556536 PSD2Q9BQI7 771 aa15.54■□□□□ 0.08
TUBB3-211ENST00000556536 NAA11Q9BSU3 229 aaPredicted RBP15.54■□□□□ 0.08
TUBB3-211ENST00000556536 PRRG4Q9BZD6 226 aa15.54■□□□□ 0.08
TUBB3-211ENST00000556536 CHST11Q9NPF2 352 aa15.54■□□□□ 0.08
TUBB3-211ENST00000556536 KRCC1Q9NPI7 259 aaPredicted RBP15.54■□□□□ 0.08
TUBB3-211ENST00000556536 MRPL39Q9NYK5 338 aaKnown RBP15.54■□□□□ 0.08
TUBB3-211ENST00000556536 C6orf203Q9P0P8 240 aaPredicted RBP15.54■□□□□ 0.08
TUBB3-211ENST00000556536 KLHL13Q9P2N7 655 aa15.54■□□□□ 0.08
TUBB3-211ENST00000556536 NKX1-2Q9UD57 310 aaPredicted RBP15.54■□□□□ 0.08
TUBB3-211ENST00000556536 CORINQ9Y5Q5 1042 aa15.54■□□□□ 0.08
TUBB3-211ENST00000556536 USP9YO00507 2555 aaPredicted RBP15.54■□□□□ 0.08
TUBB3-211ENST00000556536 ARRDC5A6NEK1 342 aa15.53■□□□□ 0.08
TUBB3-211ENST00000556536 G3V2T6 193 aa15.53■□□□□ 0.08
TUBB3-211ENST00000556536 PDLIM1O00151 329 aa15.53■□□□□ 0.08
TUBB3-211ENST00000556536 PLPP3O14495 311 aa15.53■□□□□ 0.08
TUBB3-211ENST00000556536 CYTIPO60759 359 aa15.53■□□□□ 0.08
TUBB3-211ENST00000556536 HPRP00739 348 aa15.53■□□□□ 0.08
TUBB3-211ENST00000556536 STSP08842 583 aa15.53■□□□□ 0.08
TUBB3-211ENST00000556536 HOXD4P09016 255 aaPredicted RBP15.53■□□□□ 0.08
TUBB3-211ENST00000556536 GLI4P10075 376 aa15.53■□□□□ 0.08
TUBB3-211ENST00000556536 FPR3P25089 353 aa15.53■□□□□ 0.08
TUBB3-211ENST00000556536 ARHGDIAP52565 204 aa15.53■□□□□ 0.08
TUBB3-211ENST00000556536 NUP107P57740 925 aa15.53■□□□□ 0.08
TUBB3-211ENST00000556536 SF3B4Q15427 424 aaKnown RBP eCLIP15.53■□□□□ 0.087e-7■■■■□ 24
TUBB3-211ENST00000556536 ABLIM2Q6H8Q1 611 aa15.53■□□□□ 0.08
TUBB3-211ENST00000556536 B3GNT6Q6ZMB0 384 aa15.53■□□□□ 0.08
TUBB3-211ENST00000556536 P4HA3Q7Z4N8 544 aa15.53■□□□□ 0.08
TUBB3-211ENST00000556536 STK32CQ86UX6 486 aa15.53■□□□□ 0.08
TUBB3-211ENST00000556536 ATCAYQ86WG3 371 aa15.53■□□□□ 0.08
TUBB3-211ENST00000556536 HIPK1Q86Z02 1210 aa15.53■□□□□ 0.08
TUBB3-211ENST00000556536 EPHX4Q8IUS5 362 aa15.53■□□□□ 0.08
TUBB3-211ENST00000556536 KDM8Q8N371 416 aa15.53■□□□□ 0.08
TUBB3-211ENST00000556536 MARVELD2Q8N4S9 558 aa15.53■□□□□ 0.08
TUBB3-211ENST00000556536 SCAIQ8N9R8 606 aa15.53■□□□□ 0.08
TUBB3-211ENST00000556536 OR51A7Q8NH64 312 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms