RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 GHRLQ9UBU3 117 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 GPR160Q9UJ42 338 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 A0A1W2PS29 197 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 PRSS38A1L453 326 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 TUBAL3A6NHL2 446 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 C10orf142B7Z368 130 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 ANHXE9PGG2 379 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 HMGN4O00479 90 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 FFAR1O14842 300 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 SLC31A1O15431 190 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 CTNSO60931 367 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 CLEC3AO75596 197 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 TNFRSF6BO95407 300 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 HOXB2P14652 356 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 UQCRC2P22695 453 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 NDUFS1P28331 727 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 SOAT1P35610 550 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 XCR1P46094 333 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 PXNP49023 591 aaPredicted RBP4.7□□□□□ -1.66
TMEM260-210ENST00000556422 RGS6P49758 472 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 PLA2G16P53816 162 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 GP2P55259 537 aaKnown RBP4.7□□□□□ -1.66
TMEM260-210ENST00000556422 CLDN2P57739 230 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 DUSP2Q05923 314 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 TNFRSF9Q07011 255 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 RPE65Q16518 533 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 ZNF630Q2M218 657 aaPredicted RBP4.7□□□□□ -1.66
TMEM260-210ENST00000556422 ACTBL2Q562R1 376 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 TRIQKQ629K1 86 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 TRIM40Q6P9F5 258 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 HAGHLQ6PII5 290 aaPredicted RBP4.7□□□□□ -1.66
TMEM260-210ENST00000556422 CEACAM20Q6UY09 585 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 TMPRSS7Q7RTY8 843 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 P4HA3Q7Z4N8 544 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 NANOGP1Q8N7R0 232 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 GPR32P1Q8NGA4 272 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 OR6X1Q8NH79 312 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 CCL4L1Q8NHW4 92 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 OTULINQ96BN8 352 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 MRGPRX1Q96LB2 322 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 NIPSNAP1Q9BPW8 284 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 ATG101Q9BSB4 218 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 DUSP21Q9H596 190 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 GAREM1Q9H706 876 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 FAM86C1Q9NVL1 165 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 SLC13A4Q9UKG4 626 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 FBXL3Q9UKT7 428 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 RBM7Q9Y580 266 aaKnown RBP4.7□□□□□ -1.66
TMEM260-210ENST00000556422 A0A1B0GV72 72 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 FAM86C2PA6NEL3 165 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 C1orf196B1AJZ1 125 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 F5H0A9 414 aaPredicted RBP4.7□□□□□ -1.66
TMEM260-210ENST00000556422 RAF1P04049 648 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 AK4P27144 223 aaPredicted RBP4.7□□□□□ -1.66
TMEM260-210ENST00000556422 PTGER1P34995 402 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 CHI3L1P36222 383 aaPredicted RBP4.7□□□□□ -1.66
TMEM260-210ENST00000556422 UGT2B10P36537 528 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 LIM2P55344 173 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 EMX1Q04741 257 aaPredicted RBP4.7□□□□□ -1.66
TMEM260-210ENST00000556422 HSPB3Q12988 150 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 SNTB1Q13884 538 aaKnown RBP4.7□□□□□ -1.66
TMEM260-210ENST00000556422 LRRC32Q14392 662 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 HEPACAMQ14CZ8 416 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 MAD2L1BPQ15013 274 aaPredicted RBP4.7□□□□□ -1.66
TMEM260-210ENST00000556422 IFI44LQ53G44 452 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 TNFAIP8L2Q6P589 184 aaPredicted RBP4.7□□□□□ -1.66
TMEM260-210ENST00000556422 CREB3L2Q70SY1 520 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 SLC46A3Q7Z3Q1 461 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 LINC00346Q8IVM7 164 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 ENTHD1Q8IYW4 607 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 FAM89BQ8N5H3 189 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 BPIFB6Q8NFQ5 453 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 FLVCR1-AS1Q8TAF5 88 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 SUN3Q8TAQ9 357 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 SPPL2AQ8TCT8 520 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 FAR1Q8WVX9 515 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 ACOT11Q8WXI4 607 aaPredicted RBP4.7□□□□□ -1.66
TMEM260-210ENST00000556422 CACNG8Q8WXS5 425 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 TM9SF4Q92544 642 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 MS4A6EQ96DS6 147 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 MSLNLQ96KJ4 702 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 HRASLS5Q96KN8 279 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 FEVQ99581 238 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 ITPAQ9BY32 194 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 FBXO8Q9NRD0 319 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 ACER3Q9NUN7 267 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 MED11Q9P086 117 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 CHRNA9Q9UGM1 479 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 ADAM29Q9UKF5 820 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 FBXW2Q9UKT8 454 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 C14orf166Q9Y224 244 aaKnown RBP4.7□□□□□ -1.66
TMEM260-210ENST00000556422 MSRB2Q9Y3D2 182 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 RHBDD3Q9Y3P4 386 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 WDFY4Q6ZS81 3184 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 TBC1D3DA0A087WVF3 549 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 TBC1D3IA0A087WXS9 549 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 TBC1D3EA0A087X179 549 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 TBC1D3KA0A087X1G2 549 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 TRBC2A0A5B9 178 aa4.7□□□□□ -1.66
TMEM260-210ENST00000556422 TBC1D3FA6NER0 549 aaPredicted RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms