RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 AKAP10O43572 662 aa7.83□□□□□ -1.16
GTF2A1-204ENST00000556268 EIF4E2O60573 245 aaKnown RBP7.83□□□□□ -1.16
GTF2A1-204ENST00000556268 URI1O94763 535 aaPredicted RBP7.83□□□□□ -1.16
GTF2A1-204ENST00000556268 AMY1AP04745 511 aa7.83□□□□□ -1.16
GTF2A1-204ENST00000556268 FGF4P08620 206 aa7.83□□□□□ -1.16
GTF2A1-204ENST00000556268 SDC1P18827 310 aa7.83□□□□□ -1.16
GTF2A1-204ENST00000556268 PTNP21246 168 aa7.83□□□□□ -1.16
GTF2A1-204ENST00000556268 COL10A1Q03692 680 aa7.83□□□□□ -1.16
GTF2A1-204ENST00000556268 CKAP4Q07065 602 aaKnown RBP7.83□□□□□ -1.16
GTF2A1-204ENST00000556268 SELENBP1Q13228 472 aa7.83□□□□□ -1.16
GTF2A1-204ENST00000556268 RAB35Q15286 201 aa7.83□□□□□ -1.16
GTF2A1-204ENST00000556268 KRTAP15-1Q3LI76 137 aa7.83□□□□□ -1.16
GTF2A1-204ENST00000556268 UGT3A2Q3SY77 523 aa7.83□□□□□ -1.16
GTF2A1-204ENST00000556268 FBXW9Q5XUX1 488 aa7.83□□□□□ -1.16
GTF2A1-204ENST00000556268 CDC73Q6P1J9 531 aa7.83□□□□□ -1.16
GTF2A1-204ENST00000556268 ZNF529Q6P280 563 aa7.83□□□□□ -1.16
GTF2A1-204ENST00000556268 CLEC2AQ6UVW9 174 aa7.83□□□□□ -1.16
GTF2A1-204ENST00000556268 TMPPEQ6ZT21 453 aa7.83□□□□□ -1.16
GTF2A1-204ENST00000556268 TRMT10CQ7L0Y3 403 aaKnown RBP7.83□□□□□ -1.16
GTF2A1-204ENST00000556268 GALNT5Q7Z7M9 940 aa7.83□□□□□ -1.16
GTF2A1-204ENST00000556268 MUC15Q8N387 334 aa7.83□□□□□ -1.16
GTF2A1-204ENST00000556268 COX18Q8N8Q8 333 aa7.83□□□□□ -1.16
GTF2A1-204ENST00000556268 NOA1Q8NC60 698 aaKnown RBP7.83□□□□□ -1.16
GTF2A1-204ENST00000556268 OR2T11Q8NH01 316 aa7.83□□□□□ -1.16
GTF2A1-204ENST00000556268 C10orf105Q8TEF2 133 aa7.83□□□□□ -1.16
GTF2A1-204ENST00000556268 CDS1Q92903 461 aa7.83□□□□□ -1.16
GTF2A1-204ENST00000556268 ACTRT3Q9BYD9 372 aa7.83□□□□□ -1.16
GTF2A1-204ENST00000556268 TUBB1Q9H4B7 451 aa7.83□□□□□ -1.16
GTF2A1-204ENST00000556268 SERHL2Q9H4I8 314 aa7.83□□□□□ -1.16
GTF2A1-204ENST00000556268 ANKZF1Q9H8Y5 726 aa7.83□□□□□ -1.16
GTF2A1-204ENST00000556268 MKS1Q9NXB0 559 aa7.83□□□□□ -1.16
GTF2A1-204ENST00000556268 DTNAQ9Y4J8 743 aa7.83□□□□□ -1.16
GTF2A1-204ENST00000556268 PTGDR2Q9Y5Y4 395 aa7.83□□□□□ -1.16
GTF2A1-204ENST00000556268 KCNE3Q9Y6H6 103 aa7.83□□□□□ -1.16
GTF2A1-204ENST00000556268 IGHV3-15A0A0B4J1V0 119 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 A0A1W2PPM1 405 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 H3BNH8 94 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 PDLIM1O00151 329 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 GTPBP1O00178 669 aaKnown RBP7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 LSM1O15116 133 aaKnown RBP7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 LMX1BO60663 402 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 PLIN3O60664 434 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 H6PDO95479 791 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 GUSBP08236 651 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 IGHV4-31P0DP07 118 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 MYL2P10916 166 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 BCKDHAP12694 445 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 ASMTP46597 345 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 CCT3P49368 545 aaKnown RBP7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 EFNA4P52798 201 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 NUDT6P53370 316 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 CDH11P55287 796 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 H3F3AP84243 136 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 LASP1Q14847 261 aaKnown RBP7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 QPRTQ15274 297 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 STK11Q15831 433 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 ZNF141Q15928 474 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 GABRA6Q16445 453 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 C1QTNF12Q5T7M4 302 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 MALRD1Q5VYJ5 2156 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 CLEC6AQ6EIG7 209 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 ZNF544Q6NX49 715 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 TMEM108Q6UXF1 575 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 R3HCC1LQ7Z5L2 792 aaKnown RBP7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 C17orf53Q8N3J3 647 aaPredicted RBP7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 WDR31Q8NA23 367 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 ZNF527Q8NB42 609 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 BEND2Q8NDZ0 799 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 ATP6V1C2Q8NEY4 427 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 TOR1AIP2Q8NFQ8 470 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 FBXO30Q8TB52 745 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 OR5P2Q8WZ92 322 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 JADE3Q92613 823 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 COQ8BQ96D53 544 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 OTUB1Q96FW1 271 aaPredicted RBP7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 BOD1Q96IK1 185 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 TSSK3Q96PN8 268 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 ZNF300Q96RE9 604 aaPredicted RBP7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 SDF2Q99470 211 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 INPP5KQ9BT40 448 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 TXLNGYQ9BZA5 131 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 NMUR2Q9GZQ4 415 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 LAT2Q9GZY6 243 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 MANSC1Q9H8J5 431 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 ACER3Q9NUN7 267 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 KCNE5Q9UJ90 142 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 TMED5Q9Y3A6 229 aa7.82□□□□□ -1.16
GTF2A1-204ENST00000556268 NPIPA5A0A0B4J1W7 369 aa7.81□□□□□ -1.16
GTF2A1-204ENST00000556268 ZNF716A6NP11 495 aa7.81□□□□□ -1.16
GTF2A1-204ENST00000556268 NPIPA7E9PJI5 369 aa7.81□□□□□ -1.16
GTF2A1-204ENST00000556268 AZIN1O14977 448 aa7.81□□□□□ -1.16
GTF2A1-204ENST00000556268 ZNF264O43296 627 aa7.81□□□□□ -1.16
GTF2A1-204ENST00000556268 RIPK2O43353 540 aa7.81□□□□□ -1.16
GTF2A1-204ENST00000556268 CRCPO75575 148 aa7.81□□□□□ -1.16
GTF2A1-204ENST00000556268 DHRS4L1P0CG22 281 aa7.81□□□□□ -1.16
GTF2A1-204ENST00000556268 NPIPA8P0DM63 369 aa7.81□□□□□ -1.16
GTF2A1-204ENST00000556268 LAMP1P11279 417 aa7.81□□□□□ -1.16
GTF2A1-204ENST00000556268 CPA3P15088 417 aa7.81□□□□□ -1.16
GTF2A1-204ENST00000556268 ATP6V1C1P21283 382 aa7.81□□□□□ -1.16
GTF2A1-204ENST00000556268 USF1P22415 310 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms