RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 RASD1Q9Y272 281 aa13.43□□□□□ -0.26
ACTN1-217ENST00000556203 MAST4O15021 2626 aa13.42□□□□□ -0.26
ACTN1-217ENST00000556203 TRAPPC13A5PLN9 417 aa13.42□□□□□ -0.26
ACTN1-217ENST00000556203 M0R082 166 aa13.42□□□□□ -0.26
ACTN1-217ENST00000556203 CXCR6O00574 342 aa13.42□□□□□ -0.26
ACTN1-217ENST00000556203 GSTA4O15217 222 aa13.42□□□□□ -0.26
ACTN1-217ENST00000556203 SHOX2O60902 331 aaPredicted RBP13.42□□□□□ -0.26
ACTN1-217ENST00000556203 FZD7O75084 574 aa13.42□□□□□ -0.26
ACTN1-217ENST00000556203 LYZL6O75951 148 aa13.42□□□□□ -0.26
ACTN1-217ENST00000556203 VAMP5O95183 116 aa13.42□□□□□ -0.26
ACTN1-217ENST00000556203 LYPD3O95274 346 aa13.42□□□□□ -0.26
ACTN1-217ENST00000556203 GRPRP30550 384 aa13.42□□□□□ -0.26
ACTN1-217ENST00000556203 OR1E2P47887 323 aa13.42□□□□□ -0.26
ACTN1-217ENST00000556203 ALKBH2Q6NS38 261 aa13.42□□□□□ -0.26
ACTN1-217ENST00000556203 LINC00114Q6XXX2 140 aa13.42□□□□□ -0.26
ACTN1-217ENST00000556203 BHLHA15Q7RTS1 189 aaPredicted RBP13.42□□□□□ -0.26
ACTN1-217ENST00000556203 AAED1Q7RTV5 226 aa13.42□□□□□ -0.26
ACTN1-217ENST00000556203 WFDC8Q8IUA0 241 aa13.42□□□□□ -0.26
ACTN1-217ENST00000556203 KDM8Q8N371 416 aa13.42□□□□□ -0.26
ACTN1-217ENST00000556203 C10orf53Q8N6V4 93 aa13.42□□□□□ -0.26
ACTN1-217ENST00000556203 ZIC4Q8N9L1 334 aa13.42□□□□□ -0.26
ACTN1-217ENST00000556203 OR6S1Q8NH40 331 aa13.42□□□□□ -0.26
ACTN1-217ENST00000556203 ZNF417Q8TAU3 575 aa13.42□□□□□ -0.26
ACTN1-217ENST00000556203 PIK3IP1Q96FE7 263 aa13.42□□□□□ -0.26
ACTN1-217ENST00000556203 ZNF587Q96SQ5 575 aaPredicted RBP13.42□□□□□ -0.26
ACTN1-217ENST00000556203 KCTD14Q9BQ13 255 aaPredicted RBP13.42□□□□□ -0.26
ACTN1-217ENST00000556203 SPAG4Q9NPE6 437 aa13.42□□□□□ -0.26
ACTN1-217ENST00000556203 ADA2Q9NZK5 511 aa13.42□□□□□ -0.26
ACTN1-217ENST00000556203 TAGLN3Q9UI15 199 aa13.42□□□□□ -0.26
ACTN1-217ENST00000556203 CENPEQ02224 2701 aa13.41□□□□□ -0.26
ACTN1-217ENST00000556203 ABCA12Q86UK0 2595 aa13.41□□□□□ -0.26
ACTN1-217ENST00000556203 A0A1W2PPR1 153 aa13.41□□□□□ -0.26
ACTN1-217ENST00000556203 FAM107AO95990 144 aa13.41□□□□□ -0.26
ACTN1-217ENST00000556203 BGLAPP02818 100 aa13.41□□□□□ -0.26
ACTN1-217ENST00000556203 COX5AP20674 150 aa13.41□□□□□ -0.26
ACTN1-217ENST00000556203 TAS2R41P59536 307 aa13.41□□□□□ -0.26
ACTN1-217ENST00000556203 SELENOWP63302 87 aa13.41□□□□□ -0.26
ACTN1-217ENST00000556203 LTBQ06643 244 aa13.41□□□□□ -0.26
ACTN1-217ENST00000556203 FAPQ12884 760 aa13.41□□□□□ -0.26
ACTN1-217ENST00000556203 MFSD13AQ14CX5 517 aa13.41□□□□□ -0.26
ACTN1-217ENST00000556203 GKAP1Q5VSY0 366 aaPredicted RBP13.41□□□□□ -0.26
ACTN1-217ENST00000556203 CREB3L2Q70SY1 520 aa13.41□□□□□ -0.26
ACTN1-217ENST00000556203 H1FNTQ75WM6 255 aaPredicted RBP13.41□□□□□ -0.26
ACTN1-217ENST00000556203 EPHX4Q8IUS5 362 aa13.41□□□□□ -0.26
ACTN1-217ENST00000556203 ANKS4BQ8N8V4 417 aa13.41□□□□□ -0.26
ACTN1-217ENST00000556203 LZICQ8WZA0 190 aa13.41□□□□□ -0.26
ACTN1-217ENST00000556203 SLC41A3Q96GZ6 507 aa13.41□□□□□ -0.26
ACTN1-217ENST00000556203 MPP4Q96JB8 637 aa13.41□□□□□ -0.26
ACTN1-217ENST00000556203 MOGAT1Q96PD6 335 aa13.41□□□□□ -0.26
ACTN1-217ENST00000556203 LIME1Q9H400 295 aa13.41□□□□□ -0.26
ACTN1-217ENST00000556203 ARL8BQ9NVJ2 186 aa13.41□□□□□ -0.26
ACTN1-217ENST00000556203 ASB6Q9NWX5 421 aa13.41□□□□□ -0.26
ACTN1-217ENST00000556203 FAM53CQ9NYF3 392 aa13.41□□□□□ -0.26
ACTN1-217ENST00000556203 B3GAT1Q9P2W7 334 aa13.41□□□□□ -0.26
ACTN1-217ENST00000556203 UPB1Q9UBR1 384 aa13.41□□□□□ -0.26
ACTN1-217ENST00000556203 MALT1Q9UDY8 824 aa13.41□□□□□ -0.26
ACTN1-217ENST00000556203 B3GALT5Q9Y2C3 310 aa13.41□□□□□ -0.26
ACTN1-217ENST00000556203 CORINQ9Y5Q5 1042 aa13.41□□□□□ -0.26
ACTN1-217ENST00000556203 ITPR2Q14571 2701 aa13.41□□□□□ -0.26
ACTN1-217ENST00000556203 LRRN3E7EW58 273 aa13.4□□□□□ -0.26
ACTN1-217ENST00000556203 KPNA4O00629 521 aaPredicted RBP13.4□□□□□ -0.26
ACTN1-217ENST00000556203 RAD51DO75771 328 aa13.4□□□□□ -0.26
ACTN1-217ENST00000556203 NCK1P16333 377 aa13.4□□□□□ -0.26
ACTN1-217ENST00000556203 ZNF43P17038 809 aa13.4□□□□□ -0.26
ACTN1-217ENST00000556203 GGT1P19440 569 aa13.4□□□□□ -0.26
ACTN1-217ENST00000556203 DNAJA1P31689 397 aaKnown RBP13.4□□□□□ -0.26
ACTN1-217ENST00000556203 IL1RL1Q01638 556 aa13.4□□□□□ -0.26
ACTN1-217ENST00000556203 PIN1Q13526 163 aaPredicted RBP13.4□□□□□ -0.26
ACTN1-217ENST00000556203 TAB1Q15750 504 aa13.4□□□□□ -0.26
ACTN1-217ENST00000556203 STK11Q15831 433 aa13.4□□□□□ -0.26
ACTN1-217ENST00000556203 BEX5Q5H9J7 111 aa13.4□□□□□ -0.26
ACTN1-217ENST00000556203 TSPO2Q5TGU0 170 aa13.4□□□□□ -0.26
ACTN1-217ENST00000556203 TTC33Q6PID6 262 aaPredicted RBP13.4□□□□□ -0.26
ACTN1-217ENST00000556203 VTCN1Q7Z7D3 282 aa13.4□□□□□ -0.26
ACTN1-217ENST00000556203 ZNF433Q8N7K0 673 aaPredicted RBP13.4□□□□□ -0.26
ACTN1-217ENST00000556203 HSD17B8Q92506 261 aa13.4□□□□□ -0.26
ACTN1-217ENST00000556203 OXGR1Q96P68 337 aa13.4□□□□□ -0.26
ACTN1-217ENST00000556203 HS3ST6Q96QI5 342 aa13.4□□□□□ -0.26
ACTN1-217ENST00000556203 USB1Q9BQ65 265 aaKnown RBP13.4□□□□□ -0.26
ACTN1-217ENST00000556203 ASPNQ9BXN1 380 aa13.4□□□□□ -0.26
ACTN1-217ENST00000556203 PLEKHF2Q9H8W4 249 aa13.4□□□□□ -0.26
ACTN1-217ENST00000556203 SLC7A10Q9NS82 523 aa13.4□□□□□ -0.26
ACTN1-217ENST00000556203 TAS2R16Q9NYV7 291 aa13.4□□□□□ -0.26
ACTN1-217ENST00000556203 ITGB1BP2Q9UKP3 347 aa13.4□□□□□ -0.26
ACTN1-217ENST00000556203 MPDZO75970 2070 aa13.4□□□□□ -0.27
ACTN1-217ENST00000556203 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.39□□□□□ -0.27
ACTN1-217ENST00000556203 CIB4A0PJX0 185 aa13.39□□□□□ -0.27
ACTN1-217ENST00000556203 KLF4O43474 513 aa13.39□□□□□ -0.27
ACTN1-217ENST00000556203 OR5F1O95221 314 aa13.39□□□□□ -0.27
ACTN1-217ENST00000556203 ZNF682O95780 498 aa13.39□□□□□ -0.27
ACTN1-217ENST00000556203 SERPINA1P01009 418 aa13.39□□□□□ -0.27
ACTN1-217ENST00000556203 ITGA5P08648 1049 aa13.39□□□□□ -0.27
ACTN1-217ENST00000556203 NQO1P15559 274 aaKnown RBP13.39□□□□□ -0.27
ACTN1-217ENST00000556203 SELENOPP49908 381 aa13.39□□□□□ -0.27
ACTN1-217ENST00000556203 FOXG1P55316 489 aaPredicted RBP13.39□□□□□ -0.27
ACTN1-217ENST00000556203 CLDN17P56750 224 aa13.39□□□□□ -0.27
ACTN1-217ENST00000556203 FOXD4Q12950 439 aaPredicted RBP13.39□□□□□ -0.27
ACTN1-217ENST00000556203 PMS2P3Q13401 168 aa13.39□□□□□ -0.27
ACTN1-217ENST00000556203 C1DQ13901 141 aaKnown RBP13.39□□□□□ -0.27
ACTN1-217ENST00000556203 C9orf135Q5VTT2 229 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms