RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.45□□□□□ -0.42
CHMP4BP1-201ENST00000556017 B9A039 149 aa12.44□□□□□ -0.42
CHMP4BP1-201ENST00000556017 SDHDO14521 159 aa12.44□□□□□ -0.42
CHMP4BP1-201ENST00000556017 PDE5AO76074 875 aa12.44□□□□□ -0.42
CHMP4BP1-201ENST00000556017 STAMBPO95630 424 aa12.44□□□□□ -0.42
CHMP4BP1-201ENST00000556017 TGFAP01135 160 aa12.44□□□□□ -0.42
CHMP4BP1-201ENST00000556017 DBIP07108 87 aaKnown RBP12.44□□□□□ -0.42
CHMP4BP1-201ENST00000556017 TACSTD2P09758 323 aa12.44□□□□□ -0.42
CHMP4BP1-201ENST00000556017 MYZAPP0CAP1 466 aa12.44□□□□□ -0.42
CHMP4BP1-201ENST00000556017 IL7RP16871 459 aa12.44□□□□□ -0.42
CHMP4BP1-201ENST00000556017 LBPP18428 481 aa12.44□□□□□ -0.42
CHMP4BP1-201ENST00000556017 S100A3P33764 101 aa12.44□□□□□ -0.42
CHMP4BP1-201ENST00000556017 PPOXP50336 477 aa12.44□□□□□ -0.42
CHMP4BP1-201ENST00000556017 RPL14P50914 215 aaKnown RBP12.44□□□□□ -0.42
CHMP4BP1-201ENST00000556017 CLNS1AP54105 237 aaKnown RBP12.44□□□□□ -0.42
CHMP4BP1-201ENST00000556017 NME5P56597 212 aa12.44□□□□□ -0.42
CHMP4BP1-201ENST00000556017 EGR4Q05215 589 aa12.44□□□□□ -0.42
CHMP4BP1-201ENST00000556017 GSTA3Q16772 222 aa12.44□□□□□ -0.42
CHMP4BP1-201ENST00000556017 CR1LQ2VPA4 569 aa12.44□□□□□ -0.42
CHMP4BP1-201ENST00000556017 SPATA19Q7Z5L4 167 aa12.44□□□□□ -0.42
CHMP4BP1-201ENST00000556017 GPAT4Q86UL3 456 aa12.44□□□□□ -0.42
CHMP4BP1-201ENST00000556017 KDM8Q8N371 416 aa12.44□□□□□ -0.42
CHMP4BP1-201ENST00000556017 FAM169BQ8N8A8 192 aa12.44□□□□□ -0.42
CHMP4BP1-201ENST00000556017 VPS37AQ8NEZ2 397 aa12.44□□□□□ -0.42
CHMP4BP1-201ENST00000556017 VRK1Q99986 396 aaPredicted RBP12.44□□□□□ -0.42
CHMP4BP1-201ENST00000556017 TMEM109Q9BVC6 243 aa12.44□□□□□ -0.42
CHMP4BP1-201ENST00000556017 AIG1Q9NVV5 245 aa12.44□□□□□ -0.42
CHMP4BP1-201ENST00000556017 TMEM45AQ9NWC5 275 aa12.44□□□□□ -0.42
CHMP4BP1-201ENST00000556017 B3GAT1Q9P2W7 334 aa12.44□□□□□ -0.42
CHMP4BP1-201ENST00000556017 SEC14L4Q9UDX3 406 aa12.44□□□□□ -0.42
CHMP4BP1-201ENST00000556017 GPR45Q9Y5Y3 372 aa12.44□□□□□ -0.42
CHMP4BP1-201ENST00000556017 FKBP7Q9Y680 259 aa12.44□□□□□ -0.42
CHMP4BP1-201ENST00000556017 DYSFO75923 2080 aa12.44□□□□□ -0.42
CHMP4BP1-201ENST00000556017 A0A096LPE4 126 aa12.43□□□□□ -0.42
CHMP4BP1-201ENST00000556017 A0A1W2PPZ6 126 aa12.43□□□□□ -0.42
CHMP4BP1-201ENST00000556017 BIRC5O15392 142 aa12.43□□□□□ -0.42
CHMP4BP1-201ENST00000556017 PGRP06401 933 aa12.43□□□□□ -0.42
CHMP4BP1-201ENST00000556017 SLC1A6P48664 564 aa12.43□□□□□ -0.42
CHMP4BP1-201ENST00000556017 IDH3GP51553 393 aaPredicted RBP12.43□□□□□ -0.42
CHMP4BP1-201ENST00000556017 SNRPD2P62316 118 aaKnown RBP12.43□□□□□ -0.42
CHMP4BP1-201ENST00000556017 HPCAP84074 193 aa12.43□□□□□ -0.42
CHMP4BP1-201ENST00000556017 C1orf140Q5VVS0 124 aa12.43□□□□□ -0.42
CHMP4BP1-201ENST00000556017 SLC46A3Q7Z3Q1 461 aa12.43□□□□□ -0.42
CHMP4BP1-201ENST00000556017 PANX1Q96RD7 426 aa12.43□□□□□ -0.42
CHMP4BP1-201ENST00000556017 LINC00470Q9BZP3 86 aa12.43□□□□□ -0.42
CHMP4BP1-201ENST00000556017 MYOZ1Q9NP98 299 aaPredicted RBP12.43□□□□□ -0.42
CHMP4BP1-201ENST00000556017 ADPRHL2Q9NX46 363 aa12.43□□□□□ -0.42
CHMP4BP1-201ENST00000556017 A8MVM7 634 aa12.42□□□□□ -0.42
CHMP4BP1-201ENST00000556017 ZNF587BE7ETH6 402 aa12.42□□□□□ -0.42
CHMP4BP1-201ENST00000556017 RPL36A-HNRNPH2H7BZ11 118 aa12.42□□□□□ -0.42
CHMP4BP1-201ENST00000556017 TFPTP0C1Z6 253 aa12.42□□□□□ -0.42
CHMP4BP1-201ENST00000556017 NR2F1P10589 423 aa12.42□□□□□ -0.42
CHMP4BP1-201ENST00000556017 ETFAP13804 333 aa12.42□□□□□ -0.42
CHMP4BP1-201ENST00000556017 CXCR1P25024 350 aa12.42□□□□□ -0.42
CHMP4BP1-201ENST00000556017 THBS4P35443 961 aa12.42□□□□□ -0.42
CHMP4BP1-201ENST00000556017 RIN1Q13671 783 aa12.42□□□□□ -0.42
CHMP4BP1-201ENST00000556017 GTDC1Q4AE62 458 aa12.42□□□□□ -0.42
CHMP4BP1-201ENST00000556017 TNFAIP8L3Q5GJ75 292 aa12.42□□□□□ -0.42
CHMP4BP1-201ENST00000556017 RPS26P11Q5JNZ5 115 aaPredicted RBP12.42□□□□□ -0.42
CHMP4BP1-201ENST00000556017 RNF220Q5VTB9 566 aa12.42□□□□□ -0.42
CHMP4BP1-201ENST00000556017 WBP2NLQ6ICG8 309 aa12.42□□□□□ -0.42
CHMP4BP1-201ENST00000556017 NIPAL3Q6P499 406 aa12.42□□□□□ -0.42
CHMP4BP1-201ENST00000556017 VHLLQ6RSH7 139 aa12.42□□□□□ -0.42
CHMP4BP1-201ENST00000556017 KLHL24Q6TFL4 600 aa12.42□□□□□ -0.42
CHMP4BP1-201ENST00000556017 ZNF621Q6ZSS3 439 aa12.42□□□□□ -0.42
CHMP4BP1-201ENST00000556017 SERPINA11Q86U17 422 aa12.42□□□□□ -0.42
CHMP4BP1-201ENST00000556017 WDFY1Q8IWB7 410 aa12.42□□□□□ -0.42
CHMP4BP1-201ENST00000556017 ZNF440Q8IYI8 595 aa12.42□□□□□ -0.42
CHMP4BP1-201ENST00000556017 NUP37Q8NFH4 326 aa12.42□□□□□ -0.42
CHMP4BP1-201ENST00000556017 OR52P1PQ8NH57 321 aa12.42□□□□□ -0.42
CHMP4BP1-201ENST00000556017 SLC38A5Q8WUX1 472 aa12.42□□□□□ -0.42
CHMP4BP1-201ENST00000556017 VPS33AQ96AX1 596 aa12.42□□□□□ -0.42
CHMP4BP1-201ENST00000556017 ZNF75AQ96N20 296 aa12.42□□□□□ -0.42
CHMP4BP1-201ENST00000556017 ZNF442Q9H7R0 627 aa12.42□□□□□ -0.42
CHMP4BP1-201ENST00000556017 IGHV2OR16-5A0A0B4J2B6 119 aa12.41□□□□□ -0.42
CHMP4BP1-201ENST00000556017 LYNX1G3V0Z9 82 aa12.41□□□□□ -0.42
CHMP4BP1-201ENST00000556017 VAMP5O95183 116 aa12.41□□□□□ -0.42
CHMP4BP1-201ENST00000556017 CRYAAP02489 173 aa12.41□□□□□ -0.42
CHMP4BP1-201ENST00000556017 LYNX1P0DP58 116 aa12.41□□□□□ -0.42
CHMP4BP1-201ENST00000556017 PNMTP11086 282 aa12.41□□□□□ -0.42
CHMP4BP1-201ENST00000556017 CBR1P16152 277 aa12.41□□□□□ -0.42
CHMP4BP1-201ENST00000556017 BGNP21810 368 aa12.41□□□□□ -0.42
CHMP4BP1-201ENST00000556017 TXNL4AP83876 142 aaKnown RBP12.41□□□□□ -0.42
CHMP4BP1-201ENST00000556017 ARF1P84077 181 aaKnown RBP12.41□□□□□ -0.42
CHMP4BP1-201ENST00000556017 ROR2Q01974 943 aaKnown RBP12.41□□□□□ -0.42
CHMP4BP1-201ENST00000556017 IFFO1Q0D2I5 559 aa12.41□□□□□ -0.42
CHMP4BP1-201ENST00000556017 TRIP10Q15642 601 aa12.41□□□□□ -0.42
CHMP4BP1-201ENST00000556017 CARTPTQ16568 116 aa12.41□□□□□ -0.42
CHMP4BP1-201ENST00000556017 PHYHD1Q5SRE7 291 aa12.41□□□□□ -0.42
CHMP4BP1-201ENST00000556017 PRAMEF8Q5VWM4 474 aa12.41□□□□□ -0.42
CHMP4BP1-201ENST00000556017 PRAMEF7Q5VXH5 474 aa12.41□□□□□ -0.42
CHMP4BP1-201ENST00000556017 TMEM225Q6GV28 225 aa12.41□□□□□ -0.42
CHMP4BP1-201ENST00000556017 NHLRC1Q6VVB1 395 aa12.41□□□□□ -0.42
CHMP4BP1-201ENST00000556017 ABHD12BQ7Z5M8 362 aaPredicted RBP12.41□□□□□ -0.42
CHMP4BP1-201ENST00000556017 COMTD1Q86VU5 262 aa12.41□□□□□ -0.42
CHMP4BP1-201ENST00000556017 SVOPLQ8N434 492 aa12.41□□□□□ -0.42
CHMP4BP1-201ENST00000556017 KTI12Q96EK9 354 aaPredicted RBP12.41□□□□□ -0.42
CHMP4BP1-201ENST00000556017 ZNF317Q96PQ6 595 aaPredicted RBP12.41□□□□□ -0.42
CHMP4BP1-201ENST00000556017 OR52E6Q96RD3 313 aa12.41□□□□□ -0.42
CHMP4BP1-201ENST00000556017 NOX3Q9HBY0 568 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms