RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 ZBTB49Q6ZSB9 765 aa11.16□□□□□ -0.62
SHMT2-221ENST00000555773 OAFQ86UD1 273 aa11.16□□□□□ -0.62
SHMT2-221ENST00000555773 DOLPP1Q86YN1 238 aa11.16□□□□□ -0.62
SHMT2-221ENST00000555773 ZNF843Q8N446 348 aa11.16□□□□□ -0.62
SHMT2-221ENST00000555773 ATG16L2Q8NAA4 619 aa11.16□□□□□ -0.62
SHMT2-221ENST00000555773 GALNT11Q8NCW6 608 aa11.16□□□□□ -0.62
SHMT2-221ENST00000555773 WNT2BQ93097 391 aa11.16□□□□□ -0.62
SHMT2-221ENST00000555773 RELTQ969Z4 430 aa11.16□□□□□ -0.62
SHMT2-221ENST00000555773 EME1Q96AY2 570 aa11.16□□□□□ -0.62
SHMT2-221ENST00000555773 FAM46AQ96IP4 442 aaKnown RBP11.16□□□□□ -0.62
SHMT2-221ENST00000555773 GPA33Q99795 319 aa11.16□□□□□ -0.62
SHMT2-221ENST00000555773 RBM4BQ9BQ04 359 aaKnown RBP11.16□□□□□ -0.62
SHMT2-221ENST00000555773 RBM4Q9BWF3 364 aaKnown RBP11.16□□□□□ -0.62
SHMT2-221ENST00000555773 SRXN1Q9BYN0 137 aa11.16□□□□□ -0.62
SHMT2-221ENST00000555773 PRRG4Q9BZD6 226 aa11.16□□□□□ -0.62
SHMT2-221ENST00000555773 UCK2Q9BZX2 261 aa11.16□□□□□ -0.62
SHMT2-221ENST00000555773 TP63Q9H3D4 680 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-221ENST00000555773 CHST11Q9NPF2 352 aa11.16□□□□□ -0.62
SHMT2-221ENST00000555773 C8orf4Q9NR00 106 aa11.16□□□□□ -0.62
SHMT2-221ENST00000555773 RASD1Q9Y272 281 aa11.16□□□□□ -0.62
SHMT2-221ENST00000555773 MAGED1Q9Y5V3 778 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-221ENST00000555773 POLEQ07864 2286 aa11.16□□□□□ -0.62
SHMT2-221ENST00000555773 SLC22A20A6NK97 555 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 SAC3D1A6NKF1 404 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 AQP7P3A6NL99 342 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 CLCA1A8K7I4 914 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 LRRN3E7EW58 273 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 M0R082 166 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 PLPP3O14495 311 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 CDC42EP2O14613 210 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 CASQ2O14958 399 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-221ENST00000555773 AKR7A3O95154 331 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 RCBTB2O95199 551 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 OR6A2O95222 327 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 ATP6V1G2O95670 118 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 TSPAN19P0C672 248 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 FCGR2AP12318 317 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 POU2F1P14859 743 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 ACVR2AP27037 513 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 GPR4P46093 362 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 TLE1Q04724 770 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 PDK3Q15120 406 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 PON3Q15166 354 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 RNPS1Q15287 305 aaKnown RBP11.15□□□□□ -0.62
SHMT2-221ENST00000555773 TRIP10Q15642 601 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 C3AR1Q16581 482 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 ACSF3Q4G176 576 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-221ENST00000555773 OTUD3Q5T2D3 398 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-221ENST00000555773 RPL13AP3Q6NVV1 102 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 RASSF6Q6ZTQ3 369 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 FCRLAQ7L513 359 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 NANOGNBQ7Z5D8 188 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 CD163Q86VB7 1156 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 HS3ST5Q8IZT8 346 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 LRRC17Q8N6Y2 441 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 TMEM99Q8N816 258 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 ZNF417Q8TAU3 575 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 GTPBP3Q969Y2 492 aaKnown RBP11.15□□□□□ -0.62
SHMT2-221ENST00000555773 DNAJA3Q96EY1 480 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 ZNF845Q96IR2 970 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-221ENST00000555773 TNFRSF13CQ96RJ3 184 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 TRIB1Q96RU8 372 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 ZNF587Q96SQ5 575 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-221ENST00000555773 CIB1Q99828 191 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 SF3B5Q9BWJ5 86 aaKnown RBP11.15□□□□□ -0.62
SHMT2-221ENST00000555773 NDEL1Q9GZM8 345 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 RASSF4Q9H2L5 321 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 GP6Q9HCN6 339 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 FANCFQ9NPI8 374 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 GLRX2Q9NS18 164 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 USE1Q9NZ43 259 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 KIF17Q9P2E2 1029 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 NKX1-2Q9UD57 310 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-221ENST00000555773 HIF3AQ9Y2N7 669 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 FREM3P0C091 2139 aa11.15□□□□□ -0.62
SHMT2-221ENST00000555773 FAM208BQ5VWN6 2430 aa11.15□□□□□ -0.63
SHMT2-221ENST00000555773 NCKAP5O14513 1909 aa11.14□□□□□ -0.63
SHMT2-221ENST00000555773 MS4A18H0YCH9 400 aa11.14□□□□□ -0.63
SHMT2-221ENST00000555773 BLOC1S5-TXNDC5H3BN57 136 aa11.14□□□□□ -0.63
SHMT2-221ENST00000555773 PDLIM1O00151 329 aa11.14□□□□□ -0.63
SHMT2-221ENST00000555773 SMAD9O15198 467 aaKnown RBP11.14□□□□□ -0.63
SHMT2-221ENST00000555773 ZNHIT1O43257 154 aa11.14□□□□□ -0.63
SHMT2-221ENST00000555773 CYTIPO60759 359 aa11.14□□□□□ -0.63
SHMT2-221ENST00000555773 DAPP51397 102 aa11.14□□□□□ -0.63
SHMT2-221ENST00000555773 P2RY4P51582 365 aa11.14□□□□□ -0.63
SHMT2-221ENST00000555773 RPS4XP62701 263 aaKnown RBP11.14□□□□□ -0.63
SHMT2-221ENST00000555773 PPP2R2BQ00005 443 aa11.14□□□□□ -0.63
SHMT2-221ENST00000555773 PUDPQ08623 228 aa11.14□□□□□ -0.63
SHMT2-221ENST00000555773 MS4A18Q3C1V0 323 aa11.14□□□□□ -0.63
SHMT2-221ENST00000555773 C1orf185Q5T7R7 199 aa11.14□□□□□ -0.63
SHMT2-221ENST00000555773 KDM4DQ6B0I6 523 aa11.14□□□□□ -0.63
SHMT2-221ENST00000555773 OR2A2Q6IF42 318 aa11.14□□□□□ -0.63
SHMT2-221ENST00000555773 PPP4R4Q6NUP7 873 aa11.14□□□□□ -0.63
SHMT2-221ENST00000555773 P4HA3Q7Z4N8 544 aa11.14□□□□□ -0.63
SHMT2-221ENST00000555773 PXKQ7Z7A4 578 aa11.14□□□□□ -0.63
SHMT2-221ENST00000555773 CBR4Q8N4T8 237 aa11.14□□□□□ -0.63
SHMT2-221ENST00000555773 PACRGLQ8N7B6 248 aa11.14□□□□□ -0.63
SHMT2-221ENST00000555773 CLDN22Q8N7P3 220 aa11.14□□□□□ -0.63
SHMT2-221ENST00000555773 OR51A7Q8NH64 312 aa11.14□□□□□ -0.63
SHMT2-221ENST00000555773 FNDC9Q8TBE3 224 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms