RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 UPB1Q9UBR1 384 aa9.46□□□□□ -0.9
TDP1-212ENST00000555565 DCTN4Q9UJW0 460 aa9.46□□□□□ -0.9
TDP1-212ENST00000555565 PRDM4Q9UKN5 801 aa9.46□□□□□ -0.9
TDP1-212ENST00000555565 PCDHB14Q9Y5E9 798 aa9.46□□□□□ -0.9
TDP1-212ENST00000555565 A0A0G2JPF8 293 aa9.45□□□□□ -0.9
TDP1-212ENST00000555565 A8MVM7 634 aa9.45□□□□□ -0.9
TDP1-212ENST00000555565 HNRNPCL2B2RXH8 293 aa9.45□□□□□ -0.9
TDP1-212ENST00000555565 HNRNPCL3B7ZW38 293 aa9.45□□□□□ -0.9
TDP1-212ENST00000555565 M0R1B8 84 aa9.45□□□□□ -0.9
TDP1-212ENST00000555565 HNRNPCL1O60812 293 aaKnown RBP9.45□□□□□ -0.9
TDP1-212ENST00000555565 NPIPB7O75200 414 aa9.45□□□□□ -0.9
TDP1-212ENST00000555565 NUDT7P0C024 238 aa9.45□□□□□ -0.9
TDP1-212ENST00000555565 HNRNPCL4P0DMR1 293 aa9.45□□□□□ -0.9
TDP1-212ENST00000555565 SLC25A16P16260 332 aa9.45□□□□□ -0.9
TDP1-212ENST00000555565 HOXB9P17482 250 aaPredicted RBP9.45□□□□□ -0.9
TDP1-212ENST00000555565 P2RY4P51582 365 aa9.45□□□□□ -0.9
TDP1-212ENST00000555565 NUDT6P53370 316 aa9.45□□□□□ -0.9
TDP1-212ENST00000555565 COPZ1P61923 177 aa9.45□□□□□ -0.9
TDP1-212ENST00000555565 LARS2Q15031 903 aaKnown RBP9.45□□□□□ -0.9
TDP1-212ENST00000555565 RGNQ15493 299 aa9.45□□□□□ -0.9
TDP1-212ENST00000555565 ZSWIM7Q19AV6 140 aa9.45□□□□□ -0.9
TDP1-212ENST00000555565 LIPNQ5VXI9 398 aa9.45□□□□□ -0.9
TDP1-212ENST00000555565 SLC2A7Q6PXP3 512 aa9.45□□□□□ -0.9
TDP1-212ENST00000555565 CLEC2AQ6UVW9 174 aa9.45□□□□□ -0.9
TDP1-212ENST00000555565 EPGNQ6UW88 154 aa9.45□□□□□ -0.9
TDP1-212ENST00000555565 SERPINA11Q86U17 422 aa9.45□□□□□ -0.9
TDP1-212ENST00000555565 MIER2Q8N344 545 aa9.45□□□□□ -0.9
TDP1-212ENST00000555565 C17orf78Q8N4C9 275 aa9.45□□□□□ -0.9
TDP1-212ENST00000555565 C1orf162Q8NEQ5 155 aaPredicted RBP9.45□□□□□ -0.9
TDP1-212ENST00000555565 C10orf105Q8TEF2 133 aa9.45□□□□□ -0.9
TDP1-212ENST00000555565 HTRA1Q92743 480 aa9.45□□□□□ -0.9
TDP1-212ENST00000555565 MAL2Q969L2 176 aa9.45□□□□□ -0.9
TDP1-212ENST00000555565 C3orf49Q96BT1 292 aa9.45□□□□□ -0.9
TDP1-212ENST00000555565 DHRS9Q9BPW9 319 aa9.45□□□□□ -0.9
TDP1-212ENST00000555565 SF3B5Q9BWJ5 86 aaKnown RBP9.45□□□□□ -0.9
TDP1-212ENST00000555565 SPATA9Q9BWV2 254 aa9.45□□□□□ -0.9
TDP1-212ENST00000555565 RSPO3Q9BXY4 272 aaPredicted RBP9.45□□□□□ -0.9
TDP1-212ENST00000555565 THUMPD1Q9NXG2 353 aaKnown RBP9.45□□□□□ -0.9
TDP1-212ENST00000555565 POU2F3Q9UKI9 436 aa9.45□□□□□ -0.9
TDP1-212ENST00000555565 ZNF232Q9UNY5 417 aa9.45□□□□□ -0.9
TDP1-212ENST00000555565 USH1CQ9Y6N9 552 aa9.45□□□□□ -0.9
TDP1-212ENST00000555565 TMEM229AB2RXF0 380 aa9.44□□□□□ -0.9
TDP1-212ENST00000555565 CLIC1O00299 241 aa9.44□□□□□ -0.9
TDP1-212ENST00000555565 FRS3O43559 492 aa9.44□□□□□ -0.9
TDP1-212ENST00000555565 BMP2P12643 396 aa9.44□□□□□ -0.9
TDP1-212ENST00000555565 USF1P22415 310 aaPredicted RBP9.44□□□□□ -0.9
TDP1-212ENST00000555565 MPGP29372 298 aa9.44□□□□□ -0.9
TDP1-212ENST00000555565 MRPL19P49406 292 aaKnown RBP9.44□□□□□ -0.9
TDP1-212ENST00000555565 LSM11P83369 360 aaKnown RBP eCLIP9.44□□□□□ -0.9
TDP1-212ENST00000555565 HOXC5Q00444 222 aa9.44□□□□□ -0.9
TDP1-212ENST00000555565 TGFBR3Q03167 851 aa9.44□□□□□ -0.9
TDP1-212ENST00000555565 C1orf140Q5VVS0 124 aa9.44□□□□□ -0.9
TDP1-212ENST00000555565 TMEM225Q6GV28 225 aa9.44□□□□□ -0.9
TDP1-212ENST00000555565 AAED1Q7RTV5 226 aa9.44□□□□□ -0.9
TDP1-212ENST00000555565 GPAT4Q86UL3 456 aa9.44□□□□□ -0.9
TDP1-212ENST00000555565 FUNDC1Q8IVP5 155 aa9.44□□□□□ -0.9
TDP1-212ENST00000555565 DEPDC4Q8N2C3 294 aa9.44□□□□□ -0.9
TDP1-212ENST00000555565 MUC15Q8N387 334 aa9.44□□□□□ -0.9
TDP1-212ENST00000555565 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.44□□□□□ -0.9
TDP1-212ENST00000555565 POMGNT2Q8NAT1 580 aa9.44□□□□□ -0.9
TDP1-212ENST00000555565 PROX1Q92786 737 aa9.44□□□□□ -0.9
TDP1-212ENST00000555565 MSI2Q96DH6 328 aaKnown RBP9.44□□□□□ -0.9
TDP1-212ENST00000555565 TAPBPLQ9BX59 468 aa9.44□□□□□ -0.9
TDP1-212ENST00000555565 CACNG6Q9BXT2 260 aa9.44□□□□□ -0.9
TDP1-212ENST00000555565 PIF1Q9H611 641 aa9.44□□□□□ -0.9
TDP1-212ENST00000555565 BCL2L10Q9HD36 194 aa9.44□□□□□ -0.9
TDP1-212ENST00000555565 A4GALTQ9NPC4 353 aa9.44□□□□□ -0.9
TDP1-212ENST00000555565 CBLN4Q9NTU7 201 aa9.44□□□□□ -0.9
TDP1-212ENST00000555565 ADPRHL2Q9NX46 363 aa9.44□□□□□ -0.9
TDP1-212ENST00000555565 SLC25A37Q9NYZ2 338 aa9.44□□□□□ -0.9
TDP1-212ENST00000555565 AMDHD2Q9Y303 409 aa9.44□□□□□ -0.9
TDP1-212ENST00000555565 IFT52Q9Y366 437 aa9.44□□□□□ -0.9
TDP1-212ENST00000555565 DYSFO75923 2080 aa9.44□□□□□ -0.9
TDP1-212ENST00000555565 TMEM247A6NEH6 219 aa9.43□□□□□ -0.9
TDP1-212ENST00000555565 VWC2LB2RUY7 222 aa9.43□□□□□ -0.9
TDP1-212ENST00000555565 FTCDNL1E5RQL4 147 aa9.43□□□□□ -0.9
TDP1-212ENST00000555565 ERLIN1O75477 346 aa9.43□□□□□ -0.9
TDP1-212ENST00000555565 VAMP5O95183 116 aa9.43□□□□□ -0.9
TDP1-212ENST00000555565 CDH2P19022 906 aaPredicted RBP9.43□□□□□ -0.9
TDP1-212ENST00000555565 NCF2P19878 526 aaPredicted RBP9.43□□□□□ -0.9
TDP1-212ENST00000555565 SELENOPP49908 381 aa9.43□□□□□ -0.9
TDP1-212ENST00000555565 FABP6P51161 128 aa9.43□□□□□ -0.9
TDP1-212ENST00000555565 EGR4Q05215 589 aa9.43□□□□□ -0.9
TDP1-212ENST00000555565 LGALS3BPQ08380 585 aa9.43□□□□□ -0.9
TDP1-212ENST00000555565 SQLEQ14534 574 aa9.43□□□□□ -0.9
TDP1-212ENST00000555565 HIKESHIQ53FT3 197 aa9.43□□□□□ -0.9
TDP1-212ENST00000555565 ZNF311Q5JNZ3 666 aa9.43□□□□□ -0.9
TDP1-212ENST00000555565 C1QTNF12Q5T7M4 302 aa9.43□□□□□ -0.9
TDP1-212ENST00000555565 PRAMEF8Q5VWM4 474 aa9.43□□□□□ -0.9
TDP1-212ENST00000555565 PRAMEF7Q5VXH5 474 aa9.43□□□□□ -0.9
TDP1-212ENST00000555565 FAM166AQ6J272 317 aa9.43□□□□□ -0.9
TDP1-212ENST00000555565 ZNF544Q6NX49 715 aa9.43□□□□□ -0.9
TDP1-212ENST00000555565 CREB3L2Q70SY1 520 aa9.43□□□□□ -0.9
TDP1-212ENST00000555565 MSRB3Q8IXL7 192 aa9.43□□□□□ -0.9
TDP1-212ENST00000555565 FBXL14Q8N1E6 418 aa9.43□□□□□ -0.9
TDP1-212ENST00000555565 C10orf111Q8N326 155 aa9.43□□□□□ -0.9
TDP1-212ENST00000555565 STK35Q8TDR2 534 aa9.43□□□□□ -0.9
TDP1-212ENST00000555565 FAM168AQ92567 244 aa9.43□□□□□ -0.9
TDP1-212ENST00000555565 BOD1Q96IK1 185 aa9.43□□□□□ -0.9
TDP1-212ENST00000555565 ADAD1Q96M93 576 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms