RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 VANGL1Q8TAA9 524 aaPredicted RBP18.07■□□□□ 0.48
VTI1B-205ENST00000555543 RNF217Q8TC41 542 aa18.07■□□□□ 0.48
VTI1B-205ENST00000555543 SLC47A1Q96FL8 570 aa18.07■□□□□ 0.48
VTI1B-205ENST00000555543 ZNF583Q96ND8 569 aa18.07■□□□□ 0.48
VTI1B-205ENST00000555543 MCHR1Q99705 422 aa18.07■□□□□ 0.48
VTI1B-205ENST00000555543 SH3GL1Q99961 368 aa18.07■□□□□ 0.48
VTI1B-205ENST00000555543 ECSITQ9BQ95 431 aa18.07■□□□□ 0.48
VTI1B-205ENST00000555543 TMEM204Q9BSN7 226 aa18.07■□□□□ 0.48
VTI1B-205ENST00000555543 EVA1AQ9H8M9 152 aa18.07■□□□□ 0.48
VTI1B-205ENST00000555543 TMEM27Q9HBJ8 222 aa18.07■□□□□ 0.48
VTI1B-205ENST00000555543 ASB6Q9NWX5 421 aa18.07■□□□□ 0.48
VTI1B-205ENST00000555543 A0A087WUJ7 227 aa18.06■□□□□ 0.48
VTI1B-205ENST00000555543 FMO6PO60774 539 aa18.06■□□□□ 0.48
VTI1B-205ENST00000555543 C8BP07358 591 aa18.06■□□□□ 0.48
VTI1B-205ENST00000555543 GGT1P19440 569 aa18.06■□□□□ 0.48
VTI1B-205ENST00000555543 FAM69AQ5T7M9 428 aa18.06■□□□□ 0.48
VTI1B-205ENST00000555543 TMEM225Q6GV28 225 aa18.06■□□□□ 0.48
VTI1B-205ENST00000555543 SPATA21Q7Z572 469 aa18.06■□□□□ 0.48
VTI1B-205ENST00000555543 TREML1Q86YW5 311 aa18.06■□□□□ 0.48
VTI1B-205ENST00000555543 EPHX4Q8IUS5 362 aa18.06■□□□□ 0.48
VTI1B-205ENST00000555543 KDM8Q8N371 416 aa18.06■□□□□ 0.48
VTI1B-205ENST00000555543 ELAC2Q9BQ52 826 aaKnown RBP18.06■□□□□ 0.48
VTI1B-205ENST00000555543 PARPBPQ9NWS1 579 aa18.06■□□□□ 0.48
VTI1B-205ENST00000555543 GID8Q9NWU2 228 aa18.06■□□□□ 0.48
VTI1B-205ENST00000555543 GMPR2Q9P2T1 348 aaKnown RBP18.06■□□□□ 0.48
VTI1B-205ENST00000555543 TRAV36DV7A0A075B6V5 113 aa18.05■□□□□ 0.48
VTI1B-205ENST00000555543 OR5H1A6NKK0 313 aa18.05■□□□□ 0.48
VTI1B-205ENST00000555543 CCT8L1PA6NM43 557 aa18.05■□□□□ 0.48
VTI1B-205ENST00000555543 CPSF4LA6NMK7 179 aaKnown RBP18.05■□□□□ 0.48
VTI1B-205ENST00000555543 M0R082 166 aa18.05■□□□□ 0.48
VTI1B-205ENST00000555543 THY1P04216 161 aa18.05■□□□□ 0.48
VTI1B-205ENST00000555543 COX4I1P13073 169 aa18.05■□□□□ 0.48
VTI1B-205ENST00000555543 CBLP22681 906 aa18.05■□□□□ 0.48
VTI1B-205ENST00000555543 LGALS3BPQ08380 585 aa18.05■□□□□ 0.48
VTI1B-205ENST00000555543 PPA1Q15181 289 aa18.05■□□□□ 0.48
VTI1B-205ENST00000555543 ACKR1Q16570 336 aa18.05■□□□□ 0.48
VTI1B-205ENST00000555543 TIMM23BQ5SRD1 257 aa18.05■□□□□ 0.48
VTI1B-205ENST00000555543 C9orf135Q5VTT2 229 aa18.05■□□□□ 0.48
VTI1B-205ENST00000555543 C5orf46Q6UWT4 87 aa18.05■□□□□ 0.48
VTI1B-205ENST00000555543 CREB3L2Q70SY1 520 aa18.05■□□□□ 0.48
VTI1B-205ENST00000555543 AAED1Q7RTV5 226 aa18.05■□□□□ 0.48
VTI1B-205ENST00000555543 RP9Q8TA86 221 aaKnown RBP18.05■□□□□ 0.48
VTI1B-205ENST00000555543 ZNF417Q8TAU3 575 aa18.05■□□□□ 0.48
VTI1B-205ENST00000555543 ZNF587Q96SQ5 575 aaPredicted RBP18.05■□□□□ 0.48
VTI1B-205ENST00000555543 USB1Q9BQ65 265 aaKnown RBP18.05■□□□□ 0.48
VTI1B-205ENST00000555543 FAM107BQ9H098 131 aa18.05■□□□□ 0.48
VTI1B-205ENST00000555543 TAS2R16Q9NYV7 291 aa18.05■□□□□ 0.48
VTI1B-205ENST00000555543 NPAP1Q9NZP6 1156 aa18.05■□□□□ 0.48
VTI1B-205ENST00000555543 SELENONQ9NZV5 590 aa18.05■□□□□ 0.48
VTI1B-205ENST00000555543 B3GAT1Q9P2W7 334 aa18.05■□□□□ 0.48
VTI1B-205ENST00000555543 RASD1Q9Y272 281 aa18.05■□□□□ 0.48
VTI1B-205ENST00000555543 CIB4A0PJX0 185 aa18.04■□□□□ 0.48
VTI1B-205ENST00000555543 FAM220BPB1ANY3 271 aa18.04■□□□□ 0.48
VTI1B-205ENST00000555543 OR2T1O43869 369 aa18.04■□□□□ 0.48
VTI1B-205ENST00000555543 VAMP5O95183 116 aa18.04■□□□□ 0.48
VTI1B-205ENST00000555543 LYPD3O95274 346 aa18.04■□□□□ 0.48
VTI1B-205ENST00000555543 GTF2E2P29084 291 aaKnown RBP18.04■□□□□ 0.48
VTI1B-205ENST00000555543 GRPRP30550 384 aa18.04■□□□□ 0.48
VTI1B-205ENST00000555543 SELENOPP49908 381 aa18.04■□□□□ 0.48
VTI1B-205ENST00000555543 GYS2P54840 703 aa18.04■□□□□ 0.48
VTI1B-205ENST00000555543 LTBQ06643 244 aa18.04■□□□□ 0.48
VTI1B-205ENST00000555543 ENTPD8Q5MY95 495 aa18.04■□□□□ 0.48
VTI1B-205ENST00000555543 NCMAPQ5T1S8 102 aa18.04■□□□□ 0.48
VTI1B-205ENST00000555543 SWT1Q5T5J6 900 aaKnown RBP18.04■□□□□ 0.48
VTI1B-205ENST00000555543 WDR88Q6ZMY6 472 aa18.04■□□□□ 0.48
VTI1B-205ENST00000555543 SLC26A7Q8TE54 656 aa18.04■□□□□ 0.48
VTI1B-205ENST00000555543 SLCO5A1Q9H2Y9 848 aa18.04■□□□□ 0.48
VTI1B-205ENST00000555543 CMTM6Q9NX76 183 aa18.04■□□□□ 0.48
VTI1B-205ENST00000555543 UPB1Q9UBR1 384 aa18.04■□□□□ 0.48
VTI1B-205ENST00000555543 A0A1W2PR80 420 aa18.03■□□□□ 0.48
VTI1B-205ENST00000555543 LRRN3E7EW58 273 aa18.03■□□□□ 0.48
VTI1B-205ENST00000555543 CCDC22O60826 627 aa18.03■□□□□ 0.48
VTI1B-205ENST00000555543 BGLAPP02818 100 aa18.03■□□□□ 0.48
VTI1B-205ENST00000555543 TNFRSF1BP20333 461 aa18.03■□□□□ 0.48
VTI1B-205ENST00000555543 DRD4P21917 467 aa18.03■□□□□ 0.48
VTI1B-205ENST00000555543 BSPH1Q075Z2 132 aa18.03■□□□□ 0.48
VTI1B-205ENST00000555543 VEZF1Q14119 521 aa18.03■□□□□ 0.48
VTI1B-205ENST00000555543 GABRA6Q16445 453 aa18.03■□□□□ 0.48
VTI1B-205ENST00000555543 ERICH5Q6P6B1 374 aa18.03■□□□□ 0.48
VTI1B-205ENST00000555543 ZNF613Q6PF04 617 aa18.03■□□□□ 0.48
VTI1B-205ENST00000555543 LINC00114Q6XXX2 140 aa18.03■□□□□ 0.48
VTI1B-205ENST00000555543 OR52N5Q8NH56 324 aa18.03■□□□□ 0.48
VTI1B-205ENST00000555543 LILRB1Q8NHL6 650 aaPredicted RBP18.03■□□□□ 0.48
VTI1B-205ENST00000555543 ADAMTS16Q8TE57 1224 aa18.03■□□□□ 0.48
VTI1B-205ENST00000555543 MOGAT1Q96PD6 335 aa18.03■□□□□ 0.48
VTI1B-205ENST00000555543 AMBRA1Q9C0C7 1298 aa18.03■□□□□ 0.48
VTI1B-205ENST00000555543 CADP27708 2225 aa18.02■□□□□ 0.48
VTI1B-205ENST00000555543 DPRXA6NFQ7 191 aa18.02■□□□□ 0.48
VTI1B-205ENST00000555543 AIM2O14862 343 aa18.02■□□□□ 0.48
VTI1B-205ENST00000555543 CHP2O43745 196 aa18.02■□□□□ 0.48
VTI1B-205ENST00000555543 FLNAP21333 2647 aaKnown RBP18.02■□□□□ 0.48
VTI1B-205ENST00000555543 LSP1P33241 339 aa18.02■□□□□ 0.48
VTI1B-205ENST00000555543 NIPAL3Q6P499 406 aa18.02■□□□□ 0.48
VTI1B-205ENST00000555543 C20orf204Q6ZNR8 217 aa18.02■□□□□ 0.48
VTI1B-205ENST00000555543 LINGO2Q7L985 606 aa18.02■□□□□ 0.48
VTI1B-205ENST00000555543 P2RY8Q86VZ1 359 aa18.02■□□□□ 0.48
VTI1B-205ENST00000555543 OR2T12Q8NG77 320 aa18.02■□□□□ 0.48
VTI1B-205ENST00000555543 NEUROG1Q92886 237 aa18.02■□□□□ 0.48
VTI1B-205ENST00000555543 MUCL1Q96DR8 90 aa18.02■□□□□ 0.48
VTI1B-205ENST00000555543 SLC41A3Q96GZ6 507 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms