RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 ZNF355PQ9NSJ1 428 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 AGPAT5Q9NUQ2 364 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 CLCF1Q9UBD9 225 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 MGAT4BQ9UQ53 548 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 CUX2O14529 1486 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 SPAG9O60271 1321 aaKnown RBP0.95□□□□□ -2.26
SRP54-207ENST00000555535 UBE4BO95155 1302 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 IGHV1OR21-1A0A087WYE8 117 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 A0A1B0GUS0 222 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 HIP1O00291 1037 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 RASGRF2O14827 1237 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 LANCL1O43813 399 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 B3GAT3O94766 335 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 LRATO95237 230 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 IGF1P05019 195 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 CD99P14209 185 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 HMGB2P26583 209 aaKnown RBP0.95□□□□□ -2.26
SRP54-207ENST00000555535 KIF5BP33176 963 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 SLC26A3P40879 764 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 CAMLGP49069 296 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 ARRB1P49407 418 aaPredicted RBP0.95□□□□□ -2.26
SRP54-207ENST00000555535 HSF2Q03933 536 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 PJVKQ0ZLH3 352 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 KIAA0087Q14695 138 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 SLC5A12Q1EHB4 618 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 TP53I3Q53FA7 332 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 ZNF684Q5T5D7 378 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 GALNT17Q6IS24 598 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 CENPUQ71F23 418 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 C16orf62Q7Z3J2 963 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 ANKRD37Q7Z713 158 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 CBWD2Q8IUF1 395 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 CCDC65Q8IXS2 484 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 SLC38A6Q8IZM9 456 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 KIR3DL3Q8N743 410 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 BCORP1Q8N888 145 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 CCDC54Q8NEL0 328 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 DQX1Q8TE96 717 aaKnown RBP0.95□□□□□ -2.26
SRP54-207ENST00000555535 ST8SIA1Q92185 356 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 PINX1Q96BK5 328 aaKnown RBP0.95□□□□□ -2.26
SRP54-207ENST00000555535 LRRC58Q96CX6 371 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 OR2A5Q96R48 311 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 CCNL2Q96S94 520 aaPredicted RBP0.95□□□□□ -2.26
SRP54-207ENST00000555535 SLC6A7Q99884 636 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 SLC30A2Q9BRI3 323 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 SPXQ9BT56 116 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 DEFB127Q9H1M4 99 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 RNF167Q9H6Y7 350 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 DBNDD1Q9H9R9 158 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 ZFP14Q9HCL3 533 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 POLD4Q9HCU8 107 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 PALMDQ9NP74 551 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 AATFQ9NY61 560 aaKnown RBP eCLIP0.95□□□□□ -2.26
SRP54-207ENST00000555535 ZNF230Q9UIE0 474 aaPredicted RBP0.95□□□□□ -2.26
SRP54-207ENST00000555535 ZNF391Q9UJN7 358 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 KNSTRNQ9Y448 316 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 ATP10DQ9P241 1426 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 DOCK8Q8NF50 2099 aa0.95□□□□□ -2.26
SRP54-207ENST00000555535 MN1Q10571 1320 aaPredicted RBP0.94□□□□□ -2.26
SRP54-207ENST00000555535 RNF103-CHMP3A0A140T963 221 aa0.94□□□□□ -2.26
SRP54-207ENST00000555535 A0A1B0GVX0 72 aa0.94□□□□□ -2.26
SRP54-207ENST00000555535 CIB4A0PJX0 185 aa0.94□□□□□ -2.26
SRP54-207ENST00000555535 RBMY1BA6NDE4 496 aaKnown RBP0.94□□□□□ -2.26
SRP54-207ENST00000555535 RBMY1EA6NEQ0 496 aaKnown RBP0.94□□□□□ -2.26
SRP54-207ENST00000555535 G3V4G9 280 aa0.94□□□□□ -2.26
SRP54-207ENST00000555535 VAMP5O95183 116 aa0.94□□□□□ -2.26
SRP54-207ENST00000555535 TRIM16O95361 564 aa0.94□□□□□ -2.26
SRP54-207ENST00000555535 OPN1LWP04000 364 aa0.94□□□□□ -2.26
SRP54-207ENST00000555535 RBMY1DP0C7P1 496 aaKnown RBP0.94□□□□□ -2.26
SRP54-207ENST00000555535 RBMY1A1P0DJD3 496 aaKnown RBP0.94□□□□□ -2.26
SRP54-207ENST00000555535 ABOP16442 354 aa0.94□□□□□ -2.26
SRP54-207ENST00000555535 STMN1P16949 149 aa0.94□□□□□ -2.26
SRP54-207ENST00000555535 TCN2P20062 427 aa0.94□□□□□ -2.26
SRP54-207ENST00000555535 CNR1P21554 472 aa0.94□□□□□ -2.26
SRP54-207ENST00000555535 MAPK3P27361 379 aaPredicted RBP0.94□□□□□ -2.26
SRP54-207ENST00000555535 ADRA1AP35348 466 aa0.94□□□□□ -2.26
SRP54-207ENST00000555535 HPCAL1P37235 193 aa0.94□□□□□ -2.26
SRP54-207ENST00000555535 LEPP41159 167 aa0.94□□□□□ -2.26
SRP54-207ENST00000555535 GSSP48637 474 aa0.94□□□□□ -2.26
SRP54-207ENST00000555535 GAMTQ14353 236 aa0.94□□□□□ -2.26
SRP54-207ENST00000555535 MXD4Q14582 209 aaPredicted RBP0.94□□□□□ -2.26
SRP54-207ENST00000555535 GGTA1PQ4G0N0 100 aa0.94□□□□□ -2.26
SRP54-207ENST00000555535 BCL7AQ4VC05 210 aa0.94□□□□□ -2.26
SRP54-207ENST00000555535 Q6ZN92 141 aa0.94□□□□□ -2.26
SRP54-207ENST00000555535 RBM43Q6ZSC3 357 aaKnown RBP0.94□□□□□ -2.26
SRP54-207ENST00000555535 CATSPER4Q7RTX7 472 aa0.94□□□□□ -2.26
SRP54-207ENST00000555535 TPRA1Q86W33 373 aa0.94□□□□□ -2.26
SRP54-207ENST00000555535 THOC6Q86W42 341 aaKnown RBP0.94□□□□□ -2.26
SRP54-207ENST00000555535 SLC26A11Q86WA9 606 aa0.94□□□□□ -2.26
SRP54-207ENST00000555535 ZNF679Q8IYX0 411 aa0.94□□□□□ -2.26
SRP54-207ENST00000555535 LRRC43Q8N309 656 aa0.94□□□□□ -2.26
SRP54-207ENST00000555535 STXBP6Q8NFX7 210 aa0.94□□□□□ -2.26
SRP54-207ENST00000555535 CCDC47Q96A33 483 aaKnown RBP0.94□□□□□ -2.26
SRP54-207ENST00000555535 TM4SF19Q96DZ7 209 aa0.94□□□□□ -2.26
SRP54-207ENST00000555535 C12orf66Q96MD2 445 aa0.94□□□□□ -2.26
SRP54-207ENST00000555535 SECISBP2Q96T21 854 aaKnown RBP0.94□□□□□ -2.26
SRP54-207ENST00000555535 EDEM2Q9BV94 578 aa0.94□□□□□ -2.26
SRP54-207ENST00000555535 ACTR6Q9GZN1 396 aa0.94□□□□□ -2.26
SRP54-207ENST00000555535 RSPH9Q9H1X1 276 aaPredicted RBP0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 235 ms