RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 STX18Q9P2W9 335 aaKnown RBP4.24□□□□□ -1.73
VRK1-203ENST00000555067 FLVCR2Q9UPI3 526 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 ERVW-1Q9UQF0 538 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 RBMX2Q9Y388 322 aaKnown RBP4.24□□□□□ -1.73
VRK1-203ENST00000555067 KPTNQ9Y664 436 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.23□□□□□ -1.73
VRK1-203ENST00000555067 IQCMA0A1B0GVH7 501 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.23□□□□□ -1.73
VRK1-203ENST00000555067 PRSS37A4D1T9 235 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 IGLON5A6NGN9 336 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 PDZK1P1A8MUH7 402 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 HSD17B6O14756 317 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 AIM2O14862 343 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 ZBTB5O15062 677 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 CXCL13O43927 109 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 SRSF10O75494 262 aaKnown RBP4.23□□□□□ -1.73
VRK1-203ENST00000555067 CEACAM4O75871 244 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 C1orf105O95561 183 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 PRPS2P11908 318 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 ABOP16442 354 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 CCNOP22674 350 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 CD82P27701 267 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 SHC1P29353 583 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 OXTRP30559 389 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 IFNA8P32881 189 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 SLC26A2P50443 739 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 ATP5J2P56134 94 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 SIGLEC14Q08ET2 396 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 ZIC1Q15915 447 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 XKR4Q5GH76 650 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 TCTEX1D4Q5JR98 221 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 PVRIGQ6DKI7 326 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 ASCL4Q6XD76 172 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 COPS6Q7L5N1 327 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 CEACAM19Q7Z692 300 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 ERICH1Q86X53 443 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 GPR65Q8IYL9 337 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 ST13P4Q8IZP2 240 aaPredicted RBP4.23□□□□□ -1.73
VRK1-203ENST00000555067 ZNF781Q8N8C0 355 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 FNDC5Q8NAU1 212 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 SUMF1Q8NBK3 374 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 DDI1Q8WTU0 396 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 CA5BP1Q8WTZ4 195 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 TRNT1Q96Q11 434 aaKnown RBP4.23□□□□□ -1.73
VRK1-203ENST00000555067 SLC29A1Q99808 456 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 FRMD8P1Q9BZ68 369 aaPredicted RBP4.23□□□□□ -1.73
VRK1-203ENST00000555067 MFFQ9GZY8 342 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 LIME1Q9H400 295 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 RANBP3Q9H6Z4 567 aaPredicted RBP4.23□□□□□ -1.73
VRK1-203ENST00000555067 ZNF302Q9NR11 478 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 NANSQ9NR45 359 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 GPATCH2LQ9NWQ4 482 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 NTNG1Q9Y2I2 539 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 CSAG2Q9Y5P2 127 aa4.23□□□□□ -1.73
VRK1-203ENST00000555067 NSG1A0A0A6YYJ2 146 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 IGHV3-20A0A0C4DH32 117 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 IQANK1A0A1B0GTG1 560 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 GSTTP1A0A1W2PQM5 241 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 VSTM2BA6NLU5 285 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 LRRIQ3A6PVS8 624 aaPredicted RBP4.22□□□□□ -1.73
VRK1-203ENST00000555067 G3V2L1 256 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 OR10H3O60404 316 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 FRAT2O75474 233 aaPredicted RBP4.22□□□□□ -1.73
VRK1-203ENST00000555067 FCN3O75636 299 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 PIGRP01833 764 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 TPM3P06753 285 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 UBTFL1P0CB47 393 aaPredicted RBP4.22□□□□□ -1.73
VRK1-203ENST00000555067 SDC1P18827 310 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 GATA2P23769 480 aaPredicted RBP4.22□□□□□ -1.73
VRK1-203ENST00000555067 CFHR2P36980 270 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 ETV5P41161 510 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 NSG1P42857 185 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 PSMD4P55036 377 aaKnown RBP4.22□□□□□ -1.73
VRK1-203ENST00000555067 LIM2P55344 173 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 ZNF154Q13106 437 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 DPYSL3Q14195 570 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 FASTKQ14296 549 aaKnown RBP4.22□□□□□ -1.73
VRK1-203ENST00000555067 NECTIN1Q15223 517 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 ACER2Q5QJU3 275 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 FAM219BQ5XKK7 198 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 SPECC1LQ69YQ0 1117 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 FAM199XQ6PEV8 388 aaPredicted RBP4.22□□□□□ -1.73
VRK1-203ENST00000555067 ZNF836Q6ZNA1 936 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 HDDC2Q7Z4H3 204 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 ZNF100Q8IYN0 542 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 CSNK1A1LQ8N752 337 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 SAMD12Q8N8I0 201 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 OR9A4Q8NGU2 314 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 ANGPTL6Q8NI99 470 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 FNDC8Q8TC99 324 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 PIH1D2Q8WWB5 315 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 NAT6Q93015 286 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 ITFG2Q969R8 447 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 CNRIP1Q96F85 164 aaPredicted RBP4.22□□□□□ -1.73
VRK1-203ENST00000555067 ZBED6CLQ96FA7 236 aaPredicted RBP4.22□□□□□ -1.73
VRK1-203ENST00000555067 OPALINQ96PE5 141 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 ACBD6Q9BR61 282 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 RAB1BQ9H0U4 201 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 ELL3Q9HB65 397 aaPredicted RBP4.22□□□□□ -1.73
VRK1-203ENST00000555067 ADAM22Q9P0K1 906 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms