RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 FAM53BQ14153 422 aa10.12□□□□□ -0.79
SHMT2-216ENST00000554975 DUSP5Q16690 384 aa10.12□□□□□ -0.79
SHMT2-216ENST00000554975 ZNF750Q32MQ0 723 aa10.12□□□□□ -0.79
SHMT2-216ENST00000554975 NXNL2Q5VZ03 156 aa10.12□□□□□ -0.79
SHMT2-216ENST00000554975 PRSS41Q7RTY9 318 aa10.12□□□□□ -0.79
SHMT2-216ENST00000554975 ZBTB46Q86UZ6 589 aa10.12□□□□□ -0.79
SHMT2-216ENST00000554975 LAPTM4BQ86VI4 370 aa10.12□□□□□ -0.79
SHMT2-216ENST00000554975 CMIPQ8IY22 773 aa10.12□□□□□ -0.79
SHMT2-216ENST00000554975 ZNF595Q8IYB9 648 aa10.12□□□□□ -0.79
SHMT2-216ENST00000554975 CA13Q8N1Q1 262 aa10.12□□□□□ -0.79
SHMT2-216ENST00000554975 VWA5B2Q8N398 1253 aa10.12□□□□□ -0.79
SHMT2-216ENST00000554975 IQCF1Q8N6M8 205 aa10.12□□□□□ -0.79
SHMT2-216ENST00000554975 POGLUT1Q8NBL1 392 aa10.12□□□□□ -0.79
SHMT2-216ENST00000554975 SLC16A11Q8NCK7 471 aa10.12□□□□□ -0.79
SHMT2-216ENST00000554975 OR52I1Q8NGK6 324 aa10.12□□□□□ -0.79
SHMT2-216ENST00000554975 OR52N1Q8NH53 320 aa10.12□□□□□ -0.79
SHMT2-216ENST00000554975 SETD6Q8TBK2 473 aa10.12□□□□□ -0.79
SHMT2-216ENST00000554975 FANK1Q8TC84 345 aa10.12□□□□□ -0.79
SHMT2-216ENST00000554975 HOXB13Q92826 284 aaPredicted RBP10.12□□□□□ -0.79
SHMT2-216ENST00000554975 UCN3Q969E3 161 aa10.12□□□□□ -0.79
SHMT2-216ENST00000554975 TMCO6Q96DC7 493 aa10.12□□□□□ -0.79
SHMT2-216ENST00000554975 SLC35A4Q96G79 324 aa10.12□□□□□ -0.79
SHMT2-216ENST00000554975 OR5M11Q96RB7 305 aa10.12□□□□□ -0.79
SHMT2-216ENST00000554975 SDF2Q99470 211 aa10.12□□□□□ -0.79
SHMT2-216ENST00000554975 SMR3AQ99954 134 aa10.12□□□□□ -0.79
SHMT2-216ENST00000554975 FOXC2Q99958 501 aa10.12□□□□□ -0.79
SHMT2-216ENST00000554975 OR51E2Q9H255 320 aa10.12□□□□□ -0.79
SHMT2-216ENST00000554975 SMURF1Q9HCE7 757 aa10.12□□□□□ -0.79
SHMT2-216ENST00000554975 INPP5EQ9NRR6 644 aa10.12□□□□□ -0.79
SHMT2-216ENST00000554975 MAT2BQ9NZL9 334 aa10.12□□□□□ -0.79
SHMT2-216ENST00000554975 H2AFY2Q9P0M6 372 aaPredicted RBP10.12□□□□□ -0.79
SHMT2-216ENST00000554975 ZNF229Q9UJW7 825 aa10.12□□□□□ -0.79
SHMT2-216ENST00000554975 PMF1-BGLAPU3KQ54 211 aa10.12□□□□□ -0.79
SHMT2-216ENST00000554975 ZNF407Q9C0G0 2248 aa10.12□□□□□ -0.79
SHMT2-216ENST00000554975 TLN2Q9Y4G6 2542 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 STAB1Q9NY15 2570 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 ZNF860A6NHJ4 632 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 KLF4O43474 513 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 RDH16O75452 317 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 NSA2O95478 260 aaKnown RBP10.11□□□□□ -0.79
SHMT2-216ENST00000554975 GAAP10253 952 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 CPEP16870 476 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 BMP7P18075 431 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 PAICSP22234 425 aaKnown RBP10.11□□□□□ -0.79
SHMT2-216ENST00000554975 HTR1FP30939 366 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 RORCP51449 518 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 HSF1Q00613 529 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 ACSM1Q08AH1 577 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 RUNX2Q13950 521 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 SSX1Q16384 188 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 MRPL2Q5T653 305 aaKnown RBP10.11□□□□□ -0.79
SHMT2-216ENST00000554975 ZNF550Q7Z398 422 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 COMTD1Q86VU5 262 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 TMEM200AQ86VY9 491 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 PRIMA1Q86XR5 153 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 GRAMD2AQ8IUY3 354 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 GALNT12Q8IXK2 581 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 ZNF440Q8IYI8 595 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 KLHL36Q8N4N3 616 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 ANKK1Q8NFD2 765 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 METTL21AQ8WXB1 218 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 RNFT2Q96EX2 444 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 FAM46AQ96IP4 442 aaKnown RBP10.11□□□□□ -0.79
SHMT2-216ENST00000554975 GPR137Q96N19 417 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 WDFY2Q96P53 400 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 DMRTA2Q96SC8 542 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 LMF2Q9BU23 707 aaKnown RBP10.11□□□□□ -0.79
SHMT2-216ENST00000554975 MED18Q9BUE0 208 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 CDADC1Q9BWV3 514 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 HES7Q9BYE0 225 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 NDEL1Q9GZM8 345 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 LIME1Q9H400 295 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 TMEM27Q9HBJ8 222 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 HHATLQ9HCP6 504 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 MKL2Q9ULH7 1088 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 MED31Q9Y3C7 131 aa10.11□□□□□ -0.79
SHMT2-216ENST00000554975 IGLV3-12A0A075B6K2 115 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 NSG1A0A0A6YYJ2 146 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 CDHR4A6H8M9 788 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 NKX2-6A6NCS4 301 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 OR5H15A6NDH6 313 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 UNC119BA6NIH7 251 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 KIAA1324LA8MWY0 1029 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-216ENST00000554975 H0YIG0 161 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 CYR61O00622 381 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 CLDN4O14493 209 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 SURF4O15260 269 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 CHP2O43745 196 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 FGF17O60258 216 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 HCN1O60741 890 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 IFNGP01579 166 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 SERPINA7P05543 415 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 GABRA5P31644 462 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 GALNSP34059 522 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 TRHRP34981 398 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-216ENST00000554975 EFNA3P52797 238 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 TAS2R43P59537 309 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 SNRPNP63162 240 aaKnown RBP10.1□□□□□ -0.79
SHMT2-216ENST00000554975 ACTC1P68032 377 aa10.1□□□□□ -0.79
SHMT2-216ENST00000554975 ACTA1P68133 377 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms