RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 KCNN3Q9UGI6 736 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 PRDM4Q9UKN5 801 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 BAG5Q9UL15 447 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 SLC9A8Q9Y2E8 581 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 TESMINQ9Y4I5 508 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 ITPR2Q14571 2701 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 ABCA12Q86UK0 2595 aa10.93□□□□□ -0.66
SYNE2-214ENST00000554928 NOTCH2Q04721 2471 aa10.93□□□□□ -0.66
SYNE2-214ENST00000554928 MPDZO75970 2070 aa10.93□□□□□ -0.66
SYNE2-214ENST00000554928 A0A1W2PPR1 153 aa10.93□□□□□ -0.66
SYNE2-214ENST00000554928 SH3D21A4FU49 640 aa10.93□□□□□ -0.66
SYNE2-214ENST00000554928 TRAPPC13A5PLN9 417 aa10.93□□□□□ -0.66
SYNE2-214ENST00000554928 EIF1BO60739 113 aaKnown RBP10.93□□□□□ -0.66
SYNE2-214ENST00000554928 ADAP00813 363 aa10.93□□□□□ -0.66
SYNE2-214ENST00000554928 THBDP07204 575 aa10.93□□□□□ -0.66
SYNE2-214ENST00000554928 UGT2B15P54855 530 aa10.93□□□□□ -0.66
SYNE2-214ENST00000554928 POU4F3Q15319 338 aa10.93□□□□□ -0.66
SYNE2-214ENST00000554928 FXNQ16595 210 aa10.93□□□□□ -0.66
SYNE2-214ENST00000554928 GLYATQ6IB77 296 aa10.93□□□□□ -0.66
SYNE2-214ENST00000554928 GPAT4Q86UL3 456 aa10.93□□□□□ -0.66
SYNE2-214ENST00000554928 KIF18BQ86Y91 864 aa10.93□□□□□ -0.66
SYNE2-214ENST00000554928 EPHX4Q8IUS5 362 aa10.93□□□□□ -0.66
SYNE2-214ENST00000554928 PFN4Q8NHR9 129 aa10.93□□□□□ -0.66
SYNE2-214ENST00000554928 TMEM255BQ8WV15 326 aa10.93□□□□□ -0.66
SYNE2-214ENST00000554928 RASSF5Q8WWW0 418 aa10.93□□□□□ -0.66
SYNE2-214ENST00000554928 NRGNQ92686 78 aa10.93□□□□□ -0.66
SYNE2-214ENST00000554928 FAM162AQ96A26 154 aa10.93□□□□□ -0.66
SYNE2-214ENST00000554928 C14orf79Q96F83 325 aa10.93□□□□□ -0.66
SYNE2-214ENST00000554928 ZC3HAV1LQ96H79 300 aaKnown RBP10.93□□□□□ -0.66
SYNE2-214ENST00000554928 NAA11Q9BSU3 229 aaPredicted RBP10.93□□□□□ -0.66
SYNE2-214ENST00000554928 ZNF426Q9BUY5 554 aa10.93□□□□□ -0.66
SYNE2-214ENST00000554928 EVA1AQ9H8M9 152 aa10.93□□□□□ -0.66
SYNE2-214ENST00000554928 MEPEQ9NQ76 525 aaPredicted RBP10.93□□□□□ -0.66
SYNE2-214ENST00000554928 ELOVL5Q9NYP7 299 aa10.93□□□□□ -0.66
SYNE2-214ENST00000554928 RHCGQ9UBD6 479 aa10.93□□□□□ -0.66
SYNE2-214ENST00000554928 RIMS3Q9UJD0 308 aa10.93□□□□□ -0.66
SYNE2-214ENST00000554928 A4GNTQ9UNA3 340 aa10.93□□□□□ -0.66
SYNE2-214ENST00000554928 NOSIPQ9Y314 301 aaKnown RBP10.93□□□□□ -0.66
SYNE2-214ENST00000554928 V9GYQ6 96 aa10.93□□□□□ -0.66
SYNE2-214ENST00000554928 ANKHD1Q8IWZ3 2542 aaKnown RBP10.93□□□□□ -0.66
SYNE2-214ENST00000554928 FREM1Q5H8C1 2179 aa10.93□□□□□ -0.66
SYNE2-214ENST00000554928 MS4A18H0YCH9 400 aa10.92□□□□□ -0.66
SYNE2-214ENST00000554928 C16orf97H3BN30 126 aa10.92□□□□□ -0.66
SYNE2-214ENST00000554928 FFAR1O14842 300 aa10.92□□□□□ -0.66
SYNE2-214ENST00000554928 PIP5K1CO60331 668 aa10.92□□□□□ -0.66
SYNE2-214ENST00000554928 UBOX5O94941 541 aa10.92□□□□□ -0.66
SYNE2-214ENST00000554928 IFNA14P01570 189 aa10.92□□□□□ -0.66
SYNE2-214ENST00000554928 EPXP11678 715 aa10.92□□□□□ -0.66
SYNE2-214ENST00000554928 HLA-DOBP13765 273 aa10.92□□□□□ -0.66
SYNE2-214ENST00000554928 HSD17B1P14061 328 aa10.92□□□□□ -0.66
SYNE2-214ENST00000554928 IGHV1-2P23083 117 aa10.92□□□□□ -0.66
SYNE2-214ENST00000554928 TAS2R41P59536 307 aa10.92□□□□□ -0.66
SYNE2-214ENST00000554928 MXRA7P84157 204 aa10.92□□□□□ -0.66
SYNE2-214ENST00000554928 MS4A18Q3C1V0 323 aa10.92□□□□□ -0.66
SYNE2-214ENST00000554928 SWT1Q5T5J6 900 aaKnown RBP10.92□□□□□ -0.66
SYNE2-214ENST00000554928 FAM69AQ5T7M9 428 aa10.92□□□□□ -0.66
SYNE2-214ENST00000554928 CASP12Q6UXS9 341 aa10.92□□□□□ -0.66
SYNE2-214ENST00000554928 MEX3DQ86XN8 651 aaKnown RBP10.92□□□□□ -0.66
SYNE2-214ENST00000554928 LRRC17Q8N6Y2 441 aa10.92□□□□□ -0.66
SYNE2-214ENST00000554928 FAM222BQ8WU58 562 aa10.92□□□□□ -0.66
SYNE2-214ENST00000554928 LRRC46Q96FV0 321 aa10.92□□□□□ -0.66
SYNE2-214ENST00000554928 TMEM43Q9BTV4 400 aa10.92□□□□□ -0.66
SYNE2-214ENST00000554928 MAN2C1Q9NTJ4 1040 aa10.92□□□□□ -0.66
SYNE2-214ENST00000554928 SELENONQ9NZV5 590 aa10.92□□□□□ -0.66
SYNE2-214ENST00000554928 C6orf203Q9P0P8 240 aaPredicted RBP10.92□□□□□ -0.66
SYNE2-214ENST00000554928 APCP25054 2843 aa10.92□□□□□ -0.66
SYNE2-214ENST00000554928 CSMD1Q96PZ7 3565 aa10.92□□□□□ -0.66
SYNE2-214ENST00000554928 CSMD2Q7Z408 3487 aa10.92□□□□□ -0.66
SYNE2-214ENST00000554928 FAM221AA4D161 298 aa10.91□□□□□ -0.66
SYNE2-214ENST00000554928 A6NNC1 897 aa10.91□□□□□ -0.66
SYNE2-214ENST00000554928 ARPC2O15144 300 aa10.91□□□□□ -0.66
SYNE2-214ENST00000554928 CTAG2O75638 210 aa10.91□□□□□ -0.66
SYNE2-214ENST00000554928 LYZL6O75951 148 aa10.91□□□□□ -0.66
SYNE2-214ENST00000554928 PDE5AO76074 875 aa10.91□□□□□ -0.66
SYNE2-214ENST00000554928 PRSS23O95084 383 aa10.91□□□□□ -0.66
SYNE2-214ENST00000554928 OR5F1O95221 314 aa10.91□□□□□ -0.66
SYNE2-214ENST00000554928 CH25HO95992 272 aa10.91□□□□□ -0.66
SYNE2-214ENST00000554928 FUT1P19526 365 aa10.91□□□□□ -0.66
SYNE2-214ENST00000554928 ATP6V1B2P21281 511 aa10.91□□□□□ -0.66
SYNE2-214ENST00000554928 SSTR2P30874 369 aa10.91□□□□□ -0.66
SYNE2-214ENST00000554928 SELENOPP49908 381 aa10.91□□□□□ -0.66
SYNE2-214ENST00000554928 IFI44LQ53G44 452 aa10.91□□□□□ -0.66
SYNE2-214ENST00000554928 TSPO2Q5TGU0 170 aa10.91□□□□□ -0.66
SYNE2-214ENST00000554928 TMEM225Q6GV28 225 aa10.91□□□□□ -0.66
SYNE2-214ENST00000554928 C16orf89Q6UX73 402 aa10.91□□□□□ -0.66
SYNE2-214ENST00000554928 NHLRC1Q6VVB1 395 aa10.91□□□□□ -0.66
SYNE2-214ENST00000554928 BEND4Q6ZU67 534 aa10.91□□□□□ -0.66
SYNE2-214ENST00000554928 CREB3L2Q70SY1 520 aa10.91□□□□□ -0.66
SYNE2-214ENST00000554928 SLC46A3Q7Z3Q1 461 aa10.91□□□□□ -0.66
SYNE2-214ENST00000554928 ZNF100Q8IYN0 542 aa10.91□□□□□ -0.66
SYNE2-214ENST00000554928 C10orf53Q8N6V4 93 aa10.91□□□□□ -0.66
SYNE2-214ENST00000554928 S100PBPQ96BU1 408 aa10.91□□□□□ -0.66
SYNE2-214ENST00000554928 CLPTM1LQ96KA5 538 aa10.91□□□□□ -0.66
SYNE2-214ENST00000554928 LURAP1Q96LR2 239 aa10.91□□□□□ -0.66
SYNE2-214ENST00000554928 TACO1Q9BSH4 297 aaKnown RBP10.91□□□□□ -0.66
SYNE2-214ENST00000554928 ACTR6Q9GZN1 396 aa10.91□□□□□ -0.66
SYNE2-214ENST00000554928 MCCC2Q9HCC0 563 aa10.91□□□□□ -0.66
SYNE2-214ENST00000554928 SLC7A10Q9NS82 523 aa10.91□□□□□ -0.66
SYNE2-214ENST00000554928 C20orf141Q9NUB4 165 aa10.91□□□□□ -0.66
SYNE2-214ENST00000554928 DCAF13Q9NV06 445 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms