RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 LSM11P83369 360 aaKnown RBP eCLIP14.7□□□□□ -0.06
SPTLC2-203ENST00000554901 OTUD3Q5T2D3 398 aaPredicted RBP14.7□□□□□ -0.06
SPTLC2-203ENST00000554901 ABLIM2Q6H8Q1 611 aa14.7□□□□□ -0.06
SPTLC2-203ENST00000554901 ZNF770Q6IQ21 691 aaPredicted RBP14.7□□□□□ -0.06
SPTLC2-203ENST00000554901 FCRLAQ7L513 359 aa14.7□□□□□ -0.06
SPTLC2-203ENST00000554901 HIST3H2AQ7L7L0 130 aa14.7□□□□□ -0.06
SPTLC2-203ENST00000554901 ZER1Q7Z7L7 766 aa14.7□□□□□ -0.06
SPTLC2-203ENST00000554901 HIPK1Q86Z02 1210 aa14.7□□□□□ -0.06
SPTLC2-203ENST00000554901 PQLC1Q8N2U9 271 aa14.7□□□□□ -0.06
SPTLC2-203ENST00000554901 OR5J2Q8NH18 312 aa14.7□□□□□ -0.06
SPTLC2-203ENST00000554901 OR5K1Q8NHB7 308 aa14.7□□□□□ -0.06
SPTLC2-203ENST00000554901 FNDC9Q8TBE3 224 aa14.7□□□□□ -0.06
SPTLC2-203ENST00000554901 HIST1H2ACQ93077 130 aa14.7□□□□□ -0.06
SPTLC2-203ENST00000554901 TACO1Q9BSH4 297 aaKnown RBP14.7□□□□□ -0.06
SPTLC2-203ENST00000554901 SF3B5Q9BWJ5 86 aaKnown RBP14.7□□□□□ -0.06
SPTLC2-203ENST00000554901 OSBPL10Q9BXB5 764 aa14.7□□□□□ -0.06
SPTLC2-203ENST00000554901 DCLRE1BQ9H816 532 aa14.7□□□□□ -0.06
SPTLC2-203ENST00000554901 RNF122Q9H9V4 155 aa14.7□□□□□ -0.06
SPTLC2-203ENST00000554901 CHST11Q9NPF2 352 aa14.7□□□□□ -0.06
SPTLC2-203ENST00000554901 FANCFQ9NPI8 374 aa14.7□□□□□ -0.06
SPTLC2-203ENST00000554901 C6orf203Q9P0P8 240 aaPredicted RBP14.7□□□□□ -0.06
SPTLC2-203ENST00000554901 KLHL9Q9P2J3 617 aa14.7□□□□□ -0.06
SPTLC2-203ENST00000554901 RALYQ9UKM9 306 aaKnown RBP14.7□□□□□ -0.06
SPTLC2-203ENST00000554901 MGAT4BQ9UQ53 548 aa14.7□□□□□ -0.06
SPTLC2-203ENST00000554901 RASD1Q9Y272 281 aa14.7□□□□□ -0.06
SPTLC2-203ENST00000554901 EFCAB9A8MZ26 197 aa14.69□□□□□ -0.06
SPTLC2-203ENST00000554901 M0R082 166 aa14.69□□□□□ -0.06
SPTLC2-203ENST00000554901 KLF4O43474 513 aa14.69□□□□□ -0.06
SPTLC2-203ENST00000554901 AKR7A3O95154 331 aa14.69□□□□□ -0.06
SPTLC2-203ENST00000554901 SAGP10523 405 aaPredicted RBP14.69□□□□□ -0.06
SPTLC2-203ENST00000554901 TAF11Q15544 211 aa14.69□□□□□ -0.06
SPTLC2-203ENST00000554901 HMBOX1Q6NT76 420 aa14.69□□□□□ -0.06
SPTLC2-203ENST00000554901 RPTNQ6XPR3 784 aa14.69□□□□□ -0.06
SPTLC2-203ENST00000554901 P4HA3Q7Z4N8 544 aa14.69□□□□□ -0.06
SPTLC2-203ENST00000554901 AMIGO2Q86SJ2 522 aa14.69□□□□□ -0.06
SPTLC2-203ENST00000554901 ZDHHC13Q8IUH4 622 aa14.69□□□□□ -0.06
SPTLC2-203ENST00000554901 OR10G2Q8NGC3 310 aa14.69□□□□□ -0.06
SPTLC2-203ENST00000554901 ZNF417Q8TAU3 575 aa14.69□□□□□ -0.06
SPTLC2-203ENST00000554901 GNPDA2Q8TDQ7 276 aa14.69□□□□□ -0.06
SPTLC2-203ENST00000554901 DNAJC9Q8WXX5 260 aa14.69□□□□□ -0.06
SPTLC2-203ENST00000554901 ZNF587Q96SQ5 575 aaPredicted RBP14.69□□□□□ -0.06
SPTLC2-203ENST00000554901 PKP2Q99959 881 aa14.69□□□□□ -0.06
SPTLC2-203ENST00000554901 TTYH2Q9BSA4 534 aa14.69□□□□□ -0.06
SPTLC2-203ENST00000554901 DGCR6LQ9BY27 220 aa14.69□□□□□ -0.06
SPTLC2-203ENST00000554901 MEMO1Q9Y316 297 aa14.69□□□□□ -0.06
SPTLC2-203ENST00000554901 LRRN3E7EW58 273 aa14.68□□□□□ -0.06
SPTLC2-203ENST00000554901 G3V2T6 193 aa14.68□□□□□ -0.06
SPTLC2-203ENST00000554901 RCBTB2O95199 551 aa14.68□□□□□ -0.06
SPTLC2-203ENST00000554901 TGM6O95932 706 aa14.68□□□□□ -0.06
SPTLC2-203ENST00000554901 ADAP00813 363 aa14.68□□□□□ -0.06
SPTLC2-203ENST00000554901 CRHP06850 196 aa14.68□□□□□ -0.06
SPTLC2-203ENST00000554901 TSPAN19P0C672 248 aa14.68□□□□□ -0.06
SPTLC2-203ENST00000554901 ANXA8P13928 327 aa14.68□□□□□ -0.06
SPTLC2-203ENST00000554901 MAKP20794 623 aa14.68□□□□□ -0.06
SPTLC2-203ENST00000554901 GNLYP22749 145 aa14.68□□□□□ -0.06
SPTLC2-203ENST00000554901 GSSP48637 474 aa14.68□□□□□ -0.06
SPTLC2-203ENST00000554901 P2RY4P51582 365 aa14.68□□□□□ -0.06
SPTLC2-203ENST00000554901 SLC16A1P53985 500 aa14.68□□□□□ -0.06
SPTLC2-203ENST00000554901 IST1P53990 364 aa14.68□□□□□ -0.06
SPTLC2-203ENST00000554901 RPS4XP62701 263 aaKnown RBP14.68□□□□□ -0.06
SPTLC2-203ENST00000554901 ZP4Q12836 540 aa14.68□□□□□ -0.06
SPTLC2-203ENST00000554901 PPP1R8Q12972 351 aaKnown RBP14.68□□□□□ -0.06
SPTLC2-203ENST00000554901 TSPAN31Q12999 210 aa14.68□□□□□ -0.06
SPTLC2-203ENST00000554901 PMS2P3Q13401 168 aa14.68□□□□□ -0.06
SPTLC2-203ENST00000554901 POU4F3Q15319 338 aa14.68□□□□□ -0.06
SPTLC2-203ENST00000554901 RIPPLY2Q5TAB7 128 aa14.68□□□□□ -0.06
SPTLC2-203ENST00000554901 EEF1A1P5Q5VTE0 462 aa14.68□□□□□ -0.06
SPTLC2-203ENST00000554901 TMEM225Q6GV28 225 aa14.68□□□□□ -0.06
SPTLC2-203ENST00000554901 PGBD2Q6P3X8 592 aa14.68□□□□□ -0.06
SPTLC2-203ENST00000554901 MTFR2Q6P444 385 aa14.68□□□□□ -0.06
SPTLC2-203ENST00000554901 NANOGNBQ7Z5D8 188 aa14.68□□□□□ -0.06
SPTLC2-203ENST00000554901 OAFQ86UD1 273 aa14.68□□□□□ -0.06
SPTLC2-203ENST00000554901 TMEM99Q8N816 258 aa14.68□□□□□ -0.06
SPTLC2-203ENST00000554901 DNAJA3Q96EY1 480 aa14.68□□□□□ -0.06
SPTLC2-203ENST00000554901 FAM46AQ96IP4 442 aaKnown RBP14.68□□□□□ -0.06
SPTLC2-203ENST00000554901 DMRTA2Q96SC8 542 aa14.68□□□□□ -0.06
SPTLC2-203ENST00000554901 PDP1Q9P0J1 537 aaPredicted RBP14.68□□□□□ -0.06
SPTLC2-203ENST00000554901 HIF3AQ9Y2N7 669 aa14.68□□□□□ -0.06
SPTLC2-203ENST00000554901 ESPL1Q14674 2120 aa14.68□□□□□ -0.06
SPTLC2-203ENST00000554901 IGKV3D-15A0A087WSY6 115 aa14.67□□□□□ -0.06
SPTLC2-203ENST00000554901 A0A1W2PNV4 684 aa14.67□□□□□ -0.06
SPTLC2-203ENST00000554901 PLPP3O14495 311 aa14.67□□□□□ -0.06
SPTLC2-203ENST00000554901 GPR171O14626 319 aa14.67□□□□□ -0.06
SPTLC2-203ENST00000554901 AQP8O94778 261 aa14.67□□□□□ -0.06
SPTLC2-203ENST00000554901 OR6A2O95222 327 aa14.67□□□□□ -0.06
SPTLC2-203ENST00000554901 IL2RAP01589 272 aa14.67□□□□□ -0.06
SPTLC2-203ENST00000554901 GLI4P10075 376 aa14.67□□□□□ -0.06
SPTLC2-203ENST00000554901 ZNF23P17027 643 aa14.67□□□□□ -0.06
SPTLC2-203ENST00000554901 GSTM3P21266 225 aa14.67□□□□□ -0.06
SPTLC2-203ENST00000554901 CBLP22681 906 aa14.67□□□□□ -0.06
SPTLC2-203ENST00000554901 CEACAM8P31997 349 aaPredicted RBP14.67□□□□□ -0.06
SPTLC2-203ENST00000554901 GPR4P46093 362 aa14.67□□□□□ -0.06
SPTLC2-203ENST00000554901 PRPS1P60891 318 aa14.67□□□□□ -0.06
SPTLC2-203ENST00000554901 PUDPQ08623 228 aa14.67□□□□□ -0.06
SPTLC2-203ENST00000554901 COX10Q12887 443 aa14.67□□□□□ -0.06
SPTLC2-203ENST00000554901 PPP4R4Q6NUP7 873 aa14.67□□□□□ -0.06
SPTLC2-203ENST00000554901 CD300LDQ6UXZ3 194 aa14.67□□□□□ -0.06
SPTLC2-203ENST00000554901 TMEM179BQ7Z7N9 219 aa14.67□□□□□ -0.06
SPTLC2-203ENST00000554901 MCEMP1Q8IX19 187 aa14.67□□□□□ -0.06
SPTLC2-203ENST00000554901 LRRC17Q8N6Y2 441 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms