RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 GHRLQ9UBU3 117 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 CLEC4EQ9ULY5 219 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 DHRS7Q9Y394 339 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 PKD1L1Q8TDX9 2849 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 ZANQ9Y493 2812 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 CSMD3Q7Z407 3707 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 IGHV3OR16-12A0A075B7B8 117 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 FAM230AA0A1W2PPH8 454 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 TTC26A0AVF1 554 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 ZNF840PA6NDX5 716 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 ANKRD30BLA7E2S9 258 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 C11orf98E9PRG8 122 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 H3BTX0 84 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.17□□□□□ -2.22
PRPF39-208ENST00000554785 CLDN5O00501 218 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 PDXKO00764 312 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 SLC16A4O15374 487 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 COCHO43405 550 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 SRPX2O60687 465 aaPredicted RBP1.17□□□□□ -2.22
PRPF39-208ENST00000554785 B3GALNT1O75752 331 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 KBTBD11O94819 623 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 TOXO94900 526 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 NDUFA7O95182 113 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 IL1BP01584 269 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 PIGRP01833 764 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 IGHV4-34P06331 123 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 RRASP10301 218 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 TSPAN8P19075 237 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 FUT1P19526 365 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 AXLP30530 894 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 HMGCLP35914 325 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 PSMD8P48556 350 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 ACOT2P49753 483 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 ZNF33BQ06732 778 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 DPYSQ14117 519 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 EIF2B1Q14232 305 aaKnown RBP1.17□□□□□ -2.22
PRPF39-208ENST00000554785 ALX1Q15699 326 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 LTB4RQ15722 352 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 PPP1R3AQ16821 1122 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 MICAQ29983 383 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 C15orf32Q32M92 178 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 MS4A13Q5J8X5 152 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 BEND6Q5SZJ8 279 aaPredicted RBP1.17□□□□□ -2.22
PRPF39-208ENST00000554785 UNC5DQ6UXZ4 953 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 SCARA5Q6ZMJ2 495 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 ZNF600Q6ZNG1 722 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 OTUD6AQ7L8S5 288 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 PRSS48Q7RTY5 328 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 NET1Q7Z628 596 aaPredicted RBP1.17□□□□□ -2.22
PRPF39-208ENST00000554785 ADCK1Q86TW2 530 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 CDC20BQ86Y33 519 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 BCORP1Q8N888 145 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 Q8N9G6 341 aaPredicted RBP1.17□□□□□ -2.22
PRPF39-208ENST00000554785 OR52B4Q8NGK2 314 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 ZNF671Q8TAW3 534 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 AGAP11Q8TF27 550 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 DDI1Q8WTU0 396 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 MYLPFQ96A32 169 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 C19orf60Q96EN9 201 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 DNAJA3Q96EY1 480 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 ZBED6CLQ96FA7 236 aaPredicted RBP1.17□□□□□ -2.22
PRPF39-208ENST00000554785 C1orf147Q96MC9 270 aaPredicted RBP1.17□□□□□ -2.22
PRPF39-208ENST00000554785 MCCC1Q96RQ3 725 aaPredicted RBP1.17□□□□□ -2.22
PRPF39-208ENST00000554785 OMDQ99983 421 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 APOL2Q9BQE5 337 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 CARD6Q9BX69 1037 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 LHX5Q9H2C1 402 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 RWDD1Q9H446 243 aaPredicted RBP1.17□□□□□ -2.22
PRPF39-208ENST00000554785 YAE1D1Q9NRH1 226 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 CUTCQ9NTM9 273 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 DCAF13Q9NV06 445 aaKnown RBP1.17□□□□□ -2.22
PRPF39-208ENST00000554785 FBXL12Q9NXK8 326 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 CLEC5AQ9NY25 188 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 KLRF1Q9NZS2 232 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 SENP1Q9P0U3 644 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 ARMCX1Q9P291 453 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 RNF115Q9Y4L5 304 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 HCFC1P51610 2035 aa1.17□□□□□ -2.22
PRPF39-208ENST00000554785 MXRA5Q9NR99 2828 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 HIVEP2P31629 2446 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 TRAV9-2A0A087WT02 112 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 ARHGEF35A5YM69 484 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 PP2D1A8MPX8 630 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 H0YL77 283 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 IMPA2O14732 288 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 ALOX15BO15296 676 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 CLDN3O15551 220 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 BCL2L11O43521 198 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 ZNF354AO60765 605 aaPredicted RBP1.16□□□□□ -2.22
PRPF39-208ENST00000554785 ZNF253O75346 499 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 VPS26AO75436 327 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 TOM1L1O75674 476 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 SLITRK3O94933 977 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 AKR7A3O95154 331 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 IGHV3-9P01782 118 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 WNT2P09544 360 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 GSTT2P0CG29 244 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 GSTT2BP0CG30 244 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 LIPCP11150 499 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 CCL4P13236 92 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms