RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 APC2O95996 2303 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 A0A1W2PPV4 95 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 CLEC18AA5D8T8 446 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 TBC1D3BA6NDS4 549 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 NKX6-3A6NJ46 265 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 BLOC1S5-TXNDC5H3BN57 136 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 M0R143 59 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 SLC33A1O00400 549 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-227ENST00000554491 TLX3O43711 291 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-227ENST00000554491 SSX4O60224 188 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 SRPX2O60687 465 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-227ENST00000554491 B4GALT2O60909 372 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 WBP4O75554 376 aaKnown RBP4.03□□□□□ -1.76
ATXN3-227ENST00000554491 ATG12O94817 140 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 METTL18O95568 372 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 IFNA21P01568 189 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 ICAM1P05362 532 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 NPSP0C0P6 89 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 TSPAN19P0C672 248 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 SMIM10L2AP0DMW4 78 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 SMIM10L2BP0DMW5 78 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 PLA2G2AP14555 144 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 TPH1P17752 444 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 BCKDHBP21953 392 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 DGKAP23743 735 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 IL12BP29460 328 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 PSMB10P40306 273 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 PMELP40967 661 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 MAGEA3P43357 314 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 CSNK1EP49674 416 aaKnown RBP4.03□□□□□ -1.76
ATXN3-227ENST00000554491 COMPP49747 757 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-227ENST00000554491 NOVA1P51513 510 aaKnown RBP4.03□□□□□ -1.76
ATXN3-227ENST00000554491 CDH11P55287 796 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 NME5P56597 212 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 VSX2P58304 361 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-227ENST00000554491 DNAJB13P59910 316 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 RPS20P60866 119 aaKnown RBP4.03□□□□□ -1.76
ATXN3-227ENST00000554491 CDC42P60953 191 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 SNRPFP62306 86 aaKnown RBP4.03□□□□□ -1.76
ATXN3-227ENST00000554491 HOXA4Q00056 320 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-227ENST00000554491 MYL7Q01449 175 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 EMX2Q04743 252 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 ZNF543Q08ER8 600 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 PTK6Q13882 451 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 GK3PQ14409 553 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 RPS6KA1Q15418 735 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 MEP1BQ16820 701 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 LY6KQ17RY6 165 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 NHSL2Q5HYW2 709 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 SPANXN2Q5MJ10 180 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 SPOUT1Q5T280 376 aaKnown RBP4.03□□□□□ -1.76
ATXN3-227ENST00000554491 CARD17Q5XLA6 110 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 TBC1D3GQ6DHY5 549 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 DENND1BQ6P3S1 775 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 HAGHLQ6PII5 290 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-227ENST00000554491 C19orf48Q6RUI8 117 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 TMEM270Q6UE05 265 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 CLEC18BQ6UXF7 455 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 CLEC9AQ6UXN8 241 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 HSDL2Q6YN16 418 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 FAM183BPQ6ZVS7 135 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 DPPA4Q7L190 304 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 PLPPR4Q7Z2D5 763 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 GRINAQ7Z429 371 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 WDR53Q7Z5U6 358 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-227ENST00000554491 PXKQ7Z7A4 578 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 TMEM135Q86UB9 458 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 NAA40Q86UY6 237 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 CACUL1Q86Y37 369 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 DENND1CQ8IV53 801 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 CFAP206Q8IYR0 622 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 C12orf76Q8N812 135 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-227ENST00000554491 ZNF557Q8N988 423 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-227ENST00000554491 COLGALT1Q8NBJ5 622 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 CLEC18CQ8NCF0 446 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 RDM1Q8NG50 284 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 PPTC7Q8NI37 304 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 RNASE8Q8TDE3 154 aaKnown RBP4.03□□□□□ -1.76
ATXN3-227ENST00000554491 CSGALNACT1Q8TDX6 532 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 CXorf40AQ8TE69 158 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 FAM222BQ8WU58 562 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 CYGBQ8WWM9 190 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 CACNG8Q8WXS5 425 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 BIRC7Q96CA5 298 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 TM4SF18Q96CE8 201 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 DNAJC19Q96DA6 116 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 FBXO17Q96EF6 278 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 CMTM7Q96FZ5 175 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 SCMH1Q96GD3 660 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 RITA1Q96K30 269 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 LRR1Q96L50 414 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 SAMD8Q96LT4 415 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 PRRC1Q96M27 445 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 SLC46A1Q96NT5 459 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 CNN2Q99439 309 aaKnown RBP4.03□□□□□ -1.76
ATXN3-227ENST00000554491 SEMA3CQ99985 751 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 CMSS1Q9BQ75 279 aaKnown RBP4.03□□□□□ -1.76
ATXN3-227ENST00000554491 FAM110AQ9BQ89 295 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 ZNF426Q9BUY5 554 aa4.03□□□□□ -1.76
ATXN3-227ENST00000554491 GPR88Q9GZN0 384 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms