RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 TM9SF4Q92544 642 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 KLHL15Q96M94 604 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 RACGAP1Q9H0H5 632 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 MCCC2Q9HCC0 563 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 POLE3Q9NRF9 147 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 COMMD3Q9UBI1 195 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 PRODH2Q9UF12 536 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 SIGLEC7Q9Y286 467 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 CACNA1CQ13936 2221 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 C4orf47A7E2U8 309 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 FAM157BP0CG42 384 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 RORAP35398 523 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 CRTC2Q53ET0 693 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-212ENST00000554467 AADACL4Q5VUY2 407 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 TMEM71Q6P5X7 295 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 ZNF613Q6PF04 617 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 OR4C6Q8NH72 309 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 GPR137Q96N19 417 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 ZNF768Q9H5H4 540 aaKnown RBP10.68□□□□□ -0.7
SHMT2-212ENST00000554467 KRCC1Q9NPI7 259 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-212ENST00000554467 DIMT1Q9UNQ2 313 aaKnown RBP10.68□□□□□ -0.7
SHMT2-212ENST00000554467 ADAM18Q9Y3Q7 739 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 IGHV5-10-1A0A0J9YXX1 117 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 C2orf72A6NCS6 295 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 GTPBP1O00178 669 aaKnown RBP10.68□□□□□ -0.7
SHMT2-212ENST00000554467 BHLHE40O14503 412 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 LALBAP00709 142 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 PYDC2Q56P42 97 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 TCEAL6Q6IPX3 200 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 TMEM81Q6P7N7 255 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 COX15Q7KZN9 410 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 KANSL1Q7Z3B3 1105 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 MRGPREQ86SM8 312 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 STT3BQ8TCJ2 826 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 TCEAL3Q969E4 200 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 UPRTQ96BW1 309 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 CCDC74BQ96LY2 380 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 TRIM2Q9C040 744 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 CHRNA10Q9GZZ6 450 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 PPIL3Q9H2H8 161 aaKnown RBP10.68□□□□□ -0.7
SHMT2-212ENST00000554467 GALNT9Q9HCQ5 603 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 RPS10-NUDT3A0A1W2PQS6 291 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 TCRBV16S1A1N1A0A5B0 115 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 KDM4EB2RXH2 506 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-212ENST00000554467 PPM1BO75688 479 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 IGKV3-11P04433 115 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 LIMS3P0CW19 117 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 LIMS4P0CW20 117 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 INSL4Q14641 139 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 KLHL26Q53HC5 615 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 CCDC157Q569K6 752 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 OR5M10Q6IEU7 315 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 LCN10Q6JVE6 187 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 ARSKQ6UWY0 536 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 QSOX2Q6ZRP7 698 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 MARCH3Q86UD3 253 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 C10orf53Q8N6V4 93 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 OR1F2PQ96R84 312 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 SECISBP2Q96T21 854 aaKnown RBP10.68□□□□□ -0.7
SHMT2-212ENST00000554467 FN3KQ9H479 309 aa10.68□□□□□ -0.7
SHMT2-212ENST00000554467 H2AFY2Q9P0M6 372 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-212ENST00000554467 BLACEA4D250 179 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 LINC01387J3KSC0 135 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 FMO6PO60774 539 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 SCG5P05408 212 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 TDGF1P13385 188 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 RGS19P49795 217 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 RORCP51449 518 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 FOXK2Q01167 660 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 ELAVL1Q15717 326 aaKnown RBP10.67□□□□□ -0.7
SHMT2-212ENST00000554467 XKRXQ6PP77 449 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 LINC00518Q8N0U6 118 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 BMPERQ8N8U9 685 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 DNAJA4Q8WW22 397 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-212ENST00000554467 ADIPOR1Q96A54 375 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 C8orf44Q96CB5 159 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 LCORQ96JN0 433 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-212ENST00000554467 TMED9Q9BVK6 235 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 C1QTNF6Q9BXI9 259 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 OCIAD1Q9NX40 245 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 MMACHCQ9Y4U1 282 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 SCDO00767 359 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 SCRG1O75711 98 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 SDC2P34741 201 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 PPICP45877 212 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 CRMP1Q14194 572 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 EBPQ15125 230 aaKnown RBP10.67□□□□□ -0.7
SHMT2-212ENST00000554467 TOMM34Q15785 309 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-212ENST00000554467 HLA-DQA1Q5Y7H0 255 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 ULK3Q6PHR2 472 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 CDH24Q86UP0 819 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 C1orf210Q8IVY1 113 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 TIGD4Q8IY51 512 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 PROKR2Q8NFJ6 384 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 OR52H1Q8NGJ2 320 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 OR4K13Q8NH42 304 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 BRIX1Q8TDN6 353 aaKnown RBP10.67□□□□□ -0.7
SHMT2-212ENST00000554467 WDFY2Q96P53 400 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 TEX12Q9BXU0 123 aa10.67□□□□□ -0.7
SHMT2-212ENST00000554467 C14orf105Q9NVL8 296 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms