RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 RIMS3Q9UJD0 308 aa12.51□□□□□ -0.41
SPTLC2-202ENST00000554365 RHCEP18577 417 aa12.5□□□□□ -0.41
SPTLC2-202ENST00000554365 HK1P19367 917 aa12.5□□□□□ -0.41
SPTLC2-202ENST00000554365 PTH2RP49190 550 aa12.5□□□□□ -0.41
SPTLC2-202ENST00000554365 PCYT1AP49585 367 aa12.5□□□□□ -0.41
SPTLC2-202ENST00000554365 SUMO3P55854 103 aaPredicted RBP12.5□□□□□ -0.41
SPTLC2-202ENST00000554365 PIN1Q13526 163 aaPredicted RBP12.5□□□□□ -0.41
SPTLC2-202ENST00000554365 TOMM34Q15785 309 aaPredicted RBP12.5□□□□□ -0.41
SPTLC2-202ENST00000554365 ATP6AP1Q15904 470 aa12.5□□□□□ -0.41
SPTLC2-202ENST00000554365 ENTPD8Q5MY95 495 aa12.5□□□□□ -0.41
SPTLC2-202ENST00000554365 LSMEM1Q8N8F7 131 aa12.5□□□□□ -0.41
SPTLC2-202ENST00000554365 ZNF610Q8N9Z0 462 aa12.5□□□□□ -0.41
SPTLC2-202ENST00000554365 OR5M1Q8NGP8 315 aa12.5□□□□□ -0.41
SPTLC2-202ENST00000554365 PRRC1Q96M27 445 aa12.5□□□□□ -0.41
SPTLC2-202ENST00000554365 FUZQ9BT04 418 aa12.5□□□□□ -0.41
SPTLC2-202ENST00000554365 KLHL4Q9C0H6 718 aa12.5□□□□□ -0.41
SPTLC2-202ENST00000554365 DSN1Q9H410 356 aa12.5□□□□□ -0.41
SPTLC2-202ENST00000554365 NTN4Q9HB63 628 aa12.5□□□□□ -0.41
SPTLC2-202ENST00000554365 SDHAF3Q9NRP4 125 aa12.5□□□□□ -0.41
SPTLC2-202ENST00000554365 MAN2C1Q9NTJ4 1040 aa12.5□□□□□ -0.41
SPTLC2-202ENST00000554365 JMJD1CQ15652 2540 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 CPSF4LA6NMK7 179 aaKnown RBP12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 H3BML4 177 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 ETV2O00321 342 aaPredicted RBP12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 GMFGO60234 142 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 CNOT4O95628 575 aaKnown RBP12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 ATP6V1G2O95670 118 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 CGAP01215 116 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 ANPEPP15144 967 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 ITGA2P17301 1181 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 RYKP34925 604 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 SLC6A8P48029 635 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 LIMS1P48059 325 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 SUCLG1P53597 346 aaKnown RBP12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 CLDN15P56746 228 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 OR1Q1Q15612 314 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 EXOC3L2Q2M3D2 409 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 OR2T5Q6IEZ7 315 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 PPP4R4Q6NUP7 873 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 PLEKHM3Q6ZWE6 761 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 TMEM179BQ7Z7N9 219 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 AMIGO2Q86SJ2 522 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 RANBP3LQ86VV4 465 aaPredicted RBP12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 OFCC1Q8IZS5 231 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 PQLC1Q8N2U9 271 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 TMCO5AQ8N6Q1 288 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 PIK3C3Q8NEB9 887 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 OR4C15Q8NGM1 316 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 OR2T29Q8NH02 315 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 FNDC9Q8TBE3 224 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 ZNF347Q96SE7 839 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 NPAS1Q99742 590 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 GSX2Q9BZM3 304 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 DCLRE1BQ9H816 532 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 YY1AP1Q9H869 796 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 RNF122Q9H9V4 155 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 RNPEPL1Q9HAU8 725 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 CTPS2Q9NRF8 586 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 ACER3Q9NUN7 267 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 STX18Q9P2W9 335 aaKnown RBP12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 RHCGQ9UBD6 479 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 PROCRQ9UNN8 238 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 ZNF337Q9Y3M9 751 aa12.49□□□□□ -0.41
SPTLC2-202ENST00000554365 A0A0B4J2E0 115 aa12.48□□□□□ -0.41
SPTLC2-202ENST00000554365 A0A1B0GWA3 101 aa12.48□□□□□ -0.41
SPTLC2-202ENST00000554365 A0A1B0GX12 115 aa12.48□□□□□ -0.41
SPTLC2-202ENST00000554365 CLOCKO15516 846 aa12.48□□□□□ -0.41
SPTLC2-202ENST00000554365 OR5F1O95221 314 aa12.48□□□□□ -0.41
SPTLC2-202ENST00000554365 NTN1O95631 604 aa12.48□□□□□ -0.41
SPTLC2-202ENST00000554365 CST1P01037 141 aa12.48□□□□□ -0.41
SPTLC2-202ENST00000554365 LINGO3P0C6S8 592 aa12.48□□□□□ -0.41
SPTLC2-202ENST00000554365 CD8BP10966 210 aa12.48□□□□□ -0.41
SPTLC2-202ENST00000554365 FCGR1AP12314 374 aa12.48□□□□□ -0.41
SPTLC2-202ENST00000554365 FASP25445 335 aa12.48□□□□□ -0.41
SPTLC2-202ENST00000554365 IDH2P48735 452 aaKnown RBP12.48□□□□□ -0.41
SPTLC2-202ENST00000554365 CCR4P51679 360 aa12.48□□□□□ -0.41
SPTLC2-202ENST00000554365 CLDN20P56880 219 aa12.48□□□□□ -0.41
SPTLC2-202ENST00000554365 CBFBQ13951 182 aa12.48□□□□□ -0.41
SPTLC2-202ENST00000554365 GANABQ14697 944 aaKnown RBP12.48□□□□□ -0.41
SPTLC2-202ENST00000554365 PON3Q15166 354 aa12.48□□□□□ -0.41
SPTLC2-202ENST00000554365 QPRTQ15274 297 aa12.48□□□□□ -0.41
SPTLC2-202ENST00000554365 ZNF613Q6PF04 617 aa12.48□□□□□ -0.41
SPTLC2-202ENST00000554365 WDR88Q6ZMY6 472 aa12.48□□□□□ -0.41
SPTLC2-202ENST00000554365 C22orf34Q6ZV56 151 aa12.48□□□□□ -0.41
SPTLC2-202ENST00000554365 ADAMTS16Q8TE57 1224 aa12.48□□□□□ -0.41
SPTLC2-202ENST00000554365 C3orf49Q96BT1 292 aa12.48□□□□□ -0.41
SPTLC2-202ENST00000554365 C1GALT1C1Q96EU7 318 aa12.48□□□□□ -0.41
SPTLC2-202ENST00000554365 PRSS27Q9BQR3 290 aa12.48□□□□□ -0.41
SPTLC2-202ENST00000554365 REPIN1Q9BWE0 567 aaKnown RBP12.48□□□□□ -0.41
SPTLC2-202ENST00000554365 TRIM2Q9C040 744 aa12.48□□□□□ -0.41
SPTLC2-202ENST00000554365 POLR2J2Q9GZM3 115 aaKnown RBP12.48□□□□□ -0.41
SPTLC2-202ENST00000554365 POLR2J3Q9H1A7 115 aaKnown RBP12.48□□□□□ -0.41
SPTLC2-202ENST00000554365 NMNAT1Q9HAN9 279 aaPredicted RBP12.48□□□□□ -0.41
SPTLC2-202ENST00000554365 HHATLQ9HCP6 504 aa12.48□□□□□ -0.41
SPTLC2-202ENST00000554365 DNAJB9Q9UBS3 223 aa12.48□□□□□ -0.41
SPTLC2-202ENST00000554365 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.47□□□□□ -0.41
SPTLC2-202ENST00000554365 OR2M5A3KFT3 312 aa12.47□□□□□ -0.41
SPTLC2-202ENST00000554365 TRAPPC13A5PLN9 417 aa12.47□□□□□ -0.41
SPTLC2-202ENST00000554365 DEAF1O75398 565 aaPredicted RBP12.47□□□□□ -0.41
SPTLC2-202ENST00000554365 PGCP20142 388 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms