RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 CD300AQ9UGN4 299 aa4.13□□□□□ -1.75
FOXN3-206ENST00000554005 PSME2Q9UL46 239 aa4.13□□□□□ -1.75
FOXN3-206ENST00000554005 MGAT4AQ9UM21 535 aa4.13□□□□□ -1.75
FOXN3-206ENST00000554005 AP3M1Q9Y2T2 418 aa4.13□□□□□ -1.75
FOXN3-206ENST00000554005 FBXO7Q9Y3I1 522 aa4.13□□□□□ -1.75
FOXN3-206ENST00000554005 TSC2P49815 1807 aa4.13□□□□□ -1.75
FOXN3-206ENST00000554005 ATG2AQ2TAZ0 1938 aa4.13□□□□□ -1.75
FOXN3-206ENST00000554005 CDH23Q9H251 3354 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 CTAGE15A4D2H0 777 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 KRT87PA6NCN2 255 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 RPL37AP8A6NKH3 93 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 CENPBD1B2RD01 187 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 CLDN5O00501 218 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 ADAM12O43184 909 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 CRTAPO75718 401 aaPredicted RBP4.12□□□□□ -1.75
FOXN3-206ENST00000554005 ATP5HO75947 161 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 SNAPINO95295 136 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 SEMA4FO95754 770 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 HOXD4P09016 255 aaPredicted RBP4.12□□□□□ -1.75
FOXN3-206ENST00000554005 TFPTP0C1Z6 253 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 OR4Q2P0C623 313 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 UBTFL6P0CB48 400 aaPredicted RBP4.12□□□□□ -1.75
FOXN3-206ENST00000554005 ADORA2BP29275 332 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 SHC1P29353 583 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 TMED10P49755 219 aaKnown RBP4.12□□□□□ -1.75
FOXN3-206ENST00000554005 RAB14P61106 215 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 RPL10AP62906 217 aaKnown RBP4.12□□□□□ -1.75
FOXN3-206ENST00000554005 CDKL1Q00532 357 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 RELAQ04206 551 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 ZNF33BQ06732 778 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 PLD1Q13393 1074 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 GPM6BQ13491 265 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 CCNJQ5T5M9 372 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 C1orf185Q5T7R7 199 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 DDI2Q5TDH0 399 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 LIN9Q5TKA1 542 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 WDR25Q64LD2 544 aaPredicted RBP4.12□□□□□ -1.75
FOXN3-206ENST00000554005 HIST2H2AA3Q6FI13 130 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 STEAP1BQ6NZ63 245 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 PMF1Q6P1K2 205 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 CLEC20AQ6ZU45 233 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 ARCQ7LC44 396 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 CTAGE6Q86UF2 777 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 LRRC6Q86X45 466 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 LINC00518Q8N0U6 118 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 ANKFN1Q8N957 763 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 MRPL43Q8N983 215 aaKnown RBP4.12□□□□□ -1.75
FOXN3-206ENST00000554005 CCNYQ8ND76 341 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 UBA3Q8TBC4 463 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 RDH11Q8TC12 318 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 ADAMTS16Q8TE57 1224 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 ASZ1Q8WWH4 475 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 SLC13A3Q8WWT9 602 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 RASL10AQ92737 203 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 RAD51AP1Q96B01 352 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 C16orf58Q96GQ5 468 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 VPS35Q96QK1 796 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 CPXM1Q96SM3 734 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 CTRCQ99895 268 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 C11orf70Q9BRQ4 267 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 MED10Q9BTT4 135 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 TBCDQ9BTW9 1192 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 MRPL47Q9HD33 250 aaKnown RBP4.12□□□□□ -1.75
FOXN3-206ENST00000554005 PARVAQ9NVD7 372 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 ACTR3BQ9P1U1 418 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 UVRAGQ9P2Y5 699 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 ERVK-18Q9QC07 812 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 ENOPH1Q9UHY7 261 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 CYTH4Q9UIA0 394 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 ANGPTL2Q9UKU9 493 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 DNPEPQ9ULA0 475 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 COMMD3-BMI1R4GMX3 469 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 TRIOBPQ9H2D6 2365 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 SZT2Q5T011 3432 aa4.12□□□□□ -1.75
FOXN3-206ENST00000554005 A0A0U1RRA0 63 aa4.11□□□□□ -1.75
FOXN3-206ENST00000554005 A0A1B0GTQ1 180 aa4.11□□□□□ -1.75
FOXN3-206ENST00000554005 TEX48A0A1B0GUV7 120 aa4.11□□□□□ -1.75
FOXN3-206ENST00000554005 FAM92AA1XBS5 289 aa4.11□□□□□ -1.75
FOXN3-206ENST00000554005 NCF1BA6NI72 391 aaPredicted RBP4.11□□□□□ -1.75
FOXN3-206ENST00000554005 SIGLEC16A6NMB1 481 aa4.11□□□□□ -1.75
FOXN3-206ENST00000554005 USP27XA6NNY8 438 aa4.11□□□□□ -1.75
FOXN3-206ENST00000554005 NCF1CA8MVU1 366 aaPredicted RBP4.11□□□□□ -1.75
FOXN3-206ENST00000554005 HSBP1L1C9JCN9 74 aa4.11□□□□□ -1.75
FOXN3-206ENST00000554005 F8VP50 259 aa4.11□□□□□ -1.75
FOXN3-206ENST00000554005 SH2D1BO14796 132 aa4.11□□□□□ -1.75
FOXN3-206ENST00000554005 BET1O15155 118 aa4.11□□□□□ -1.75
FOXN3-206ENST00000554005 CBR3O75828 277 aa4.11□□□□□ -1.75
FOXN3-206ENST00000554005 SYNGR4O95473 234 aa4.11□□□□□ -1.75
FOXN3-206ENST00000554005 ALPPP05187 535 aa4.11□□□□□ -1.75
FOXN3-206ENST00000554005 RPS17P08708 135 aaKnown RBP4.11□□□□□ -1.75
FOXN3-206ENST00000554005 HIST1H2AGP0C0S8 130 aaPredicted RBP4.11□□□□□ -1.75
FOXN3-206ENST00000554005 ALPPL2P10696 532 aa4.11□□□□□ -1.75
FOXN3-206ENST00000554005 CYP2F1P24903 491 aa4.11□□□□□ -1.75
FOXN3-206ENST00000554005 HOXA9P31269 272 aa4.11□□□□□ -1.75
FOXN3-206ENST00000554005 CCR1P32246 355 aa4.11□□□□□ -1.75
FOXN3-206ENST00000554005 KRT6CP48668 564 aa4.11□□□□□ -1.75
FOXN3-206ENST00000554005 ARPP19P56211 112 aa4.11□□□□□ -1.75
FOXN3-206ENST00000554005 DAOAP59103 153 aa4.11□□□□□ -1.75
FOXN3-206ENST00000554005 RPS4XP62701 263 aaKnown RBP4.11□□□□□ -1.75
FOXN3-206ENST00000554005 ADIGQ0VDE8 80 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms