RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 ARPC2O15144 300 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 TPST1O60507 370 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 SS18L1O75177 396 aaPredicted RBP6.85□□□□□ -1.31
ABCD4-220ENST00000553998 DNAJC8O75937 253 aaPredicted RBP6.85□□□□□ -1.31
ABCD4-220ENST00000553998 NTN1O95631 604 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 OPN1SWP03999 348 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 FESP07332 822 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 FCGR2AP12318 317 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 TCN1P20061 433 aaPredicted RBP6.85□□□□□ -1.31
ABCD4-220ENST00000553998 ME2P23368 584 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 FKBP2P26885 142 aaKnown RBP6.85□□□□□ -1.31
ABCD4-220ENST00000553998 RYKP34925 604 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 CDKN1AP38936 164 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 ACAA2P42765 397 aaKnown RBP6.85□□□□□ -1.31
ABCD4-220ENST00000553998 SLC1A3P43003 542 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 RNF144AP50876 292 aaPredicted RBP6.85□□□□□ -1.31
ABCD4-220ENST00000553998 TPD52P55327 224 aaPredicted RBP6.85□□□□□ -1.31
ABCD4-220ENST00000553998 RGS8P57771 180 aaPredicted RBP6.85□□□□□ -1.31
ABCD4-220ENST00000553998 SESN3P58005 492 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 DSCR9P59020 149 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 RAC1P63000 192 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 SELENOWP63302 87 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 RUNX1T1Q06455 604 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 TRAP1Q12931 704 aaKnown RBP6.85□□□□□ -1.31
ABCD4-220ENST00000553998 FOXF1Q12946 379 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 TRIM25Q14258 630 aaKnown RBP6.85□□□□□ -1.31
ABCD4-220ENST00000553998 PON3Q15166 354 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 NRF1Q16656 503 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 DUSP7Q16829 419 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 TMEM249Q2WGJ8 235 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 PGGHGQ32M88 737 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 ZNF672Q499Z4 452 aaPredicted RBP6.85□□□□□ -1.31
ABCD4-220ENST00000553998 LRRC23Q53EV4 343 aaPredicted RBP6.85□□□□□ -1.31
ABCD4-220ENST00000553998 MTX3Q5HYI7 312 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 RAET1LQ5VY80 246 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 WBP2NLQ6ICG8 309 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 PGM2L1Q6PCE3 622 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 BEND4Q6ZU67 534 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 CBLL1Q75N03 491 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 DTX2Q86UW9 622 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 RANBP3LQ86VV4 465 aaPredicted RBP6.85□□□□□ -1.31
ABCD4-220ENST00000553998 RNF148Q8N7C7 305 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 LSMEM1Q8N8F7 131 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 ZNF563Q8TA94 476 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 ASB9Q96DX5 294 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 GMPPAQ96IJ6 420 aaPredicted RBP6.85□□□□□ -1.31
ABCD4-220ENST00000553998 NSMCE2Q96MF7 247 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 ARHGDIGQ99819 225 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 THTPAQ9BU02 230 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 TRAF4Q9BUZ4 470 aaPredicted RBP6.85□□□□□ -1.31
ABCD4-220ENST00000553998 HDHD5Q9BXW7 423 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 RSPO3Q9BXY4 272 aaPredicted RBP6.85□□□□□ -1.31
ABCD4-220ENST00000553998 TRIM2Q9C040 744 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 POLR2J2Q9GZM3 115 aaKnown RBP6.85□□□□□ -1.31
ABCD4-220ENST00000553998 ACTR6Q9GZN1 396 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 PCDHAC1Q9H158 963 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 POLR2J3Q9H1A7 115 aaKnown RBP6.85□□□□□ -1.31
ABCD4-220ENST00000553998 LRMDAQ9H2I8 198 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 ESRP2Q9H6T0 727 aaKnown RBP6.85□□□□□ -1.31
ABCD4-220ENST00000553998 C12orf10Q9HB07 376 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 DCAF13Q9NV06 445 aaKnown RBP6.85□□□□□ -1.31
ABCD4-220ENST00000553998 ACTR3BQ9P1U1 418 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 GMPR2Q9P2T1 348 aaKnown RBP6.85□□□□□ -1.31
ABCD4-220ENST00000553998 EGFL7Q9UHF1 273 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 SAMD4AQ9UPU9 718 aaKnown RBP6.85□□□□□ -1.31
ABCD4-220ENST00000553998 VDAC3Q9Y277 283 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 RNF115Q9Y4L5 304 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 SPIN1Q9Y657 262 aaPredicted RBP6.85□□□□□ -1.31
ABCD4-220ENST00000553998 AP4B1Q9Y6B7 739 aa6.85□□□□□ -1.31
ABCD4-220ENST00000553998 FREM1Q5H8C1 2179 aa6.84□□□□□ -1.31
ABCD4-220ENST00000553998 IGHV4-30-2A0A087WSY4 118 aa6.84□□□□□ -1.31
ABCD4-220ENST00000553998 GJE1A6NN92 205 aa6.84□□□□□ -1.31
ABCD4-220ENST00000553998 TMEM229AB2RXF0 380 aa6.84□□□□□ -1.31
ABCD4-220ENST00000553998 AP3D1O14617 1153 aa6.84□□□□□ -1.31
ABCD4-220ENST00000553998 GSC2O15499 205 aa6.84□□□□□ -1.31
ABCD4-220ENST00000553998 GMFGO60234 142 aa6.84□□□□□ -1.31
ABCD4-220ENST00000553998 NDUFS7O75251 213 aa6.84□□□□□ -1.31
ABCD4-220ENST00000553998 AQP8O94778 261 aa6.84□□□□□ -1.31
ABCD4-220ENST00000553998 STAMBPO95630 424 aa6.84□□□□□ -1.31
ABCD4-220ENST00000553998 SERPINA1P01009 418 aa6.84□□□□□ -1.31
ABCD4-220ENST00000553998 GKN3PP0CG01 181 aa6.84□□□□□ -1.31
ABCD4-220ENST00000553998 NCK1P16333 377 aa6.84□□□□□ -1.31
ABCD4-220ENST00000553998 HOXB6P17509 224 aaKnown RBP6.84□□□□□ -1.31
ABCD4-220ENST00000553998 PSMA4P25789 261 aaKnown RBP6.84□□□□□ -1.31
ABCD4-220ENST00000553998 APOBEC1P41238 236 aaKnown RBP6.84□□□□□ -1.31
ABCD4-220ENST00000553998 IDH2P48735 452 aaKnown RBP6.84□□□□□ -1.31
ABCD4-220ENST00000553998 CLK1P49759 484 aaKnown RBP6.84□□□□□ -1.31
ABCD4-220ENST00000553998 POLR2HP52434 150 aaKnown RBP6.84□□□□□ -1.31
ABCD4-220ENST00000553998 CLDN20P56880 219 aa6.84□□□□□ -1.31
ABCD4-220ENST00000553998 RPS3AP61247 264 aaKnown RBP6.84□□□□□ -1.31
ABCD4-220ENST00000553998 NCALDP61601 193 aa6.84□□□□□ -1.31
ABCD4-220ENST00000553998 MERTKQ12866 999 aa6.84□□□□□ -1.31
ABCD4-220ENST00000553998 SELENBP1Q13228 472 aa6.84□□□□□ -1.31
ABCD4-220ENST00000553998 TOMM34Q15785 309 aaPredicted RBP6.84□□□□□ -1.31
ABCD4-220ENST00000553998 EXOC3L2Q2M3D2 409 aa6.84□□□□□ -1.31
ABCD4-220ENST00000553998 GLIPR1L2Q4G1C9 344 aa6.84□□□□□ -1.31
ABCD4-220ENST00000553998 IFI44LQ53G44 452 aa6.84□□□□□ -1.31
ABCD4-220ENST00000553998 SWT1Q5T5J6 900 aaKnown RBP6.84□□□□□ -1.31
ABCD4-220ENST00000553998 LCN8Q6JVE9 175 aa6.84□□□□□ -1.31
ABCD4-220ENST00000553998 C3orf33Q6P1S2 294 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms