RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 FRS3O43559 492 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 OR2T1O43869 369 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 EFNA2O43921 213 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 CYTIPO60759 359 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 MFN2O95140 757 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 OPN1SWP03999 348 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 CD1EP15812 388 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 FPR1P21462 350 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 SHC1P29353 583 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 AGTR1P30556 359 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 ACAA2P42765 397 aaKnown RBP7.43□□□□□ -1.22
PSEN1-209ENST00000553855 KIR2DL2P43627 348 aaPredicted RBP7.43□□□□□ -1.22
PSEN1-209ENST00000553855 IL1RL1Q01638 556 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 TLE4Q04727 773 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 MFSD13AQ14CX5 517 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 OR7A5Q15622 319 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 ADRM1Q16186 407 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 LRRC23Q53EV4 343 aaPredicted RBP7.43□□□□□ -1.22
PSEN1-209ENST00000553855 ALG10BQ5I7T1 473 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 C1orf140Q5VVS0 124 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 FAM91A1Q658Y4 838 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 TMEM225Q6GV28 225 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 HACD2Q6Y1H2 254 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 GALNT5Q7Z7M9 940 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 PTOV1Q86YD1 416 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 TUSC5Q8IXB3 177 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 C10orf53Q8N6V4 93 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 LSMEM1Q8N8F7 131 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 ABHD3Q8WU67 409 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 SLC38A4Q969I6 547 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 C14orf79Q96F83 325 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 Q96M66 194 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 MCHR1Q99705 422 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 MED18Q9BUE0 208 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 KLHL4Q9C0H6 718 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 OR11A1Q9GZK7 315 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 PLSCR4Q9NRQ2 329 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 PARPBPQ9NWS1 579 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 ZNF226Q9NYT6 803 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 JKAMPQ9P055 326 aa7.43□□□□□ -1.22
PSEN1-209ENST00000553855 NOSIPQ9Y314 301 aaKnown RBP7.43□□□□□ -1.22
PSEN1-209ENST00000553855 SPTBN1Q01082 2364 aaKnown RBP7.43□□□□□ -1.22
PSEN1-209ENST00000553855 PHF3Q92576 2039 aaKnown RBP7.43□□□□□ -1.22
PSEN1-209ENST00000553855 A0A1B0GWA3 101 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 SH3D21A4FU49 640 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 ZNF724A8MTY0 619 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 FXYD1O00168 92 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 SMAD9O15198 467 aaKnown RBP7.42□□□□□ -1.22
PSEN1-209ENST00000553855 TPST1O60507 370 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 FMO6PO60774 539 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 MRPL33O75394 65 aaKnown RBP7.42□□□□□ -1.22
PSEN1-209ENST00000553855 VAMP5O95183 116 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 GOSR1O95249 250 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 LGI1O95970 557 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 PRG2P13727 222 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 PPP3CBP16298 524 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 IL32P24001 234 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 PCYT1AP49585 367 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 SLC7A2P52569 658 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 PCBP3P57721 371 aaKnown RBP7.42□□□□□ -1.22
PSEN1-209ENST00000553855 HOXC5Q00444 222 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 LIPEQ05469 1076 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 DMTNQ08495 405 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 CEACAM7Q14002 265 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 PDK3Q15120 406 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 OR1Q1Q15612 314 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 OTUD3Q5T2D3 398 aaPredicted RBP7.42□□□□□ -1.22
PSEN1-209ENST00000553855 SFRP5Q5T4F7 317 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 ZNF613Q6PF04 617 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 PAQR6Q6TCH4 344 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 C16orf89Q6UX73 402 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 CCDC80Q76M96 950 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 ATG4DQ86TL0 474 aaPredicted RBP7.42□□□□□ -1.22
PSEN1-209ENST00000553855 MICU2Q8IYU8 434 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 UBE2J2Q8N2K1 259 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 C10orf111Q8N326 155 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 ZNF610Q8N9Z0 462 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 CCDC197Q8NCU1 140 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 STEAP2Q8NFT2 490 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 VANGL1Q8TAA9 524 aaPredicted RBP7.42□□□□□ -1.22
PSEN1-209ENST00000553855 UTP4Q969X6 686 aaKnown RBP7.42□□□□□ -1.22
PSEN1-209ENST00000553855 FAM162AQ96A26 154 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 C3orf49Q96BT1 292 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 SLC25A36Q96CQ1 311 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 DNAJA3Q96EY1 480 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 ARL5BQ96KC2 179 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 DACH2Q96NX9 599 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 CCT8L2Q96SF2 557 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 KCTD14Q9BQ13 255 aaPredicted RBP7.42□□□□□ -1.22
PSEN1-209ENST00000553855 HDHD5Q9BXW7 423 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 BCO1Q9HAY6 547 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 MCCC2Q9HCC0 563 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 SPAG4Q9NPE6 437 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 ADA2Q9NZK5 511 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 TAGLN3Q9UI15 199 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 SH3GLB1Q9Y371 365 aa7.42□□□□□ -1.22
PSEN1-209ENST00000553855 SPTAN1Q13813 2472 aaKnown RBP7.42□□□□□ -1.22
PSEN1-209ENST00000553855 NCOA6Q14686 2063 aaPredicted RBP7.42□□□□□ -1.22
PSEN1-209ENST00000553855 ICE1Q9Y2F5 2266 aa7.41□□□□□ -1.22
PSEN1-209ENST00000553855 TRAV36DV7A0A075B6V5 113 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms