RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 OLIG3Q7RTU3 272 aa14.47□□□□□ -0.09
ACTN1-209ENST00000553659 ZNF550Q7Z398 422 aa14.47□□□□□ -0.09
ACTN1-209ENST00000553659 WDR53Q7Z5U6 358 aaPredicted RBP14.47□□□□□ -0.09
ACTN1-209ENST00000553659 ZER1Q7Z7L7 766 aa14.47□□□□□ -0.09
ACTN1-209ENST00000553659 CLIP4Q8N3C7 705 aa14.47□□□□□ -0.09
ACTN1-209ENST00000553659 SLC15A4Q8N697 577 aa14.47□□□□□ -0.09
ACTN1-209ENST00000553659 TEX47Q8TBZ9 253 aa14.47□□□□□ -0.09
ACTN1-209ENST00000553659 PIK3R3Q92569 461 aa14.47□□□□□ -0.09
ACTN1-209ENST00000553659 ZG16BQ96DA0 208 aa14.47□□□□□ -0.09
ACTN1-209ENST00000553659 SENP5Q96HI0 755 aaPredicted RBP14.47□□□□□ -0.09
ACTN1-209ENST00000553659 WFDC6Q9BQY6 131 aa14.47□□□□□ -0.09
ACTN1-209ENST00000553659 COPS4Q9BT78 406 aa14.47□□□□□ -0.09
ACTN1-209ENST00000553659 OR10A5Q9H207 317 aa14.47□□□□□ -0.09
ACTN1-209ENST00000553659 TMEM27Q9HBJ8 222 aa14.47□□□□□ -0.09
ACTN1-209ENST00000553659 PAK1IP1Q9NWT1 392 aaPredicted RBP14.47□□□□□ -0.09
ACTN1-209ENST00000553659 ZNF226Q9NYT6 803 aa14.47□□□□□ -0.09
ACTN1-209ENST00000553659 B4GALT7Q9UBV7 327 aa14.47□□□□□ -0.09
ACTN1-209ENST00000553659 TMEM5Q9Y2B1 443 aa14.47□□□□□ -0.09
ACTN1-209ENST00000553659 CHST2Q9Y4C5 530 aa14.47□□□□□ -0.09
ACTN1-209ENST00000553659 ABCA4P78363 2273 aa14.46□□□□□ -0.09
ACTN1-209ENST00000553659 CDK1P06493 297 aa14.46□□□□□ -0.09
ACTN1-209ENST00000553659 POU1F1P28069 291 aa14.46□□□□□ -0.09
ACTN1-209ENST00000553659 KIR2DL3P43628 341 aa14.46□□□□□ -0.09
ACTN1-209ENST00000553659 GSSP48637 474 aa14.46□□□□□ -0.09
ACTN1-209ENST00000553659 ROR2Q01974 943 aaKnown RBP14.46□□□□□ -0.09
ACTN1-209ENST00000553659 EMX1Q04741 257 aaPredicted RBP14.46□□□□□ -0.09
ACTN1-209ENST00000553659 ZNF141Q15928 474 aa14.46□□□□□ -0.09
ACTN1-209ENST00000553659 OCLNQ16625 522 aa14.46□□□□□ -0.09
ACTN1-209ENST00000553659 CCNJQ5T5M9 372 aa14.46□□□□□ -0.09
ACTN1-209ENST00000553659 MRPL2Q5T653 305 aaKnown RBP14.46□□□□□ -0.09
ACTN1-209ENST00000553659 SYT6Q5T7P8 510 aaPredicted RBP14.46□□□□□ -0.09
ACTN1-209ENST00000553659 RPL13AP3Q6NVV1 102 aa14.46□□□□□ -0.09
ACTN1-209ENST00000553659 ZNF440Q8IYI8 595 aa14.46□□□□□ -0.09
ACTN1-209ENST00000553659 SLC43A2Q8N370 569 aa14.46□□□□□ -0.09
ACTN1-209ENST00000553659 SLC22A8Q8TCC7 542 aa14.46□□□□□ -0.09
ACTN1-209ENST00000553659 PAQR8Q8TEZ7 354 aa14.46□□□□□ -0.09
ACTN1-209ENST00000553659 OSTF1Q92882 214 aa14.46□□□□□ -0.09
ACTN1-209ENST00000553659 HS6ST2Q96MM7 605 aa14.46□□□□□ -0.09
ACTN1-209ENST00000553659 SIGLEC11Q96RL6 698 aa14.46□□□□□ -0.09
ACTN1-209ENST00000553659 RACGAP1Q9H0H5 632 aa14.46□□□□□ -0.09
ACTN1-209ENST00000553659 ACKR4Q9NPB9 350 aa14.46□□□□□ -0.09
ACTN1-209ENST00000553659 ERVK-18Q9QC07 812 aa14.46□□□□□ -0.09
ACTN1-209ENST00000553659 SPRR3Q9UBC9 169 aa14.46□□□□□ -0.09
ACTN1-209ENST00000553659 ST6GALNAC2Q9UJ37 374 aa14.46□□□□□ -0.09
ACTN1-209ENST00000553659 BOKQ9UMX3 212 aaPredicted RBP14.46□□□□□ -0.09
ACTN1-209ENST00000553659 GPR55Q9Y2T6 319 aaPredicted RBP14.46□□□□□ -0.09
ACTN1-209ENST00000553659 NAV3Q8IVL0 2385 aa14.45□□□□□ -0.1
ACTN1-209ENST00000553659 GXYLT2A0PJZ3 443 aa14.45□□□□□ -0.1
ACTN1-209ENST00000553659 TRIM64BA6NI03 449 aa14.45□□□□□ -0.1
ACTN1-209ENST00000553659 HSPB2A8KAH6 182 aa14.45□□□□□ -0.1
ACTN1-209ENST00000553659 MT-ND2P03891 347 aa14.45□□□□□ -0.1
ACTN1-209ENST00000553659 IGKV3-11P04433 115 aa14.45□□□□□ -0.1
ACTN1-209ENST00000553659 RFPL3SP0C7P2 107 aa14.45□□□□□ -0.1
ACTN1-209ENST00000553659 KLK2P20151 261 aa14.45□□□□□ -0.1
ACTN1-209ENST00000553659 DRD5P21918 477 aa14.45□□□□□ -0.1
ACTN1-209ENST00000553659 ZNF136P52737 540 aa14.45□□□□□ -0.1
ACTN1-209ENST00000553659 SNTB1Q13884 538 aaKnown RBP14.45□□□□□ -0.1
ACTN1-209ENST00000553659 HSPB2Q16082 182 aa14.45□□□□□ -0.1
ACTN1-209ENST00000553659 UBE2UQ5VVX9 321 aa14.45□□□□□ -0.1
ACTN1-209ENST00000553659 GPR107Q5VW38 600 aa14.45□□□□□ -0.1
ACTN1-209ENST00000553659 FIGNL1Q6PIW4 674 aa14.45□□□□□ -0.1
ACTN1-209ENST00000553659 LYPD8Q6UX82 237 aa14.45□□□□□ -0.1
ACTN1-209ENST00000553659 DGAT2L6Q6ZPD8 337 aa14.45□□□□□ -0.1
ACTN1-209ENST00000553659 AHSA2Q719I0 299 aa14.45□□□□□ -0.1
ACTN1-209ENST00000553659 C9orf40Q8IXQ3 194 aa14.45□□□□□ -0.1
ACTN1-209ENST00000553659 DND1Q8IYX4 353 aaKnown RBP14.45□□□□□ -0.1
ACTN1-209ENST00000553659 STX19Q8N4C7 294 aa14.45□□□□□ -0.1
ACTN1-209ENST00000553659 ZNF615Q8N8J6 731 aa14.45□□□□□ -0.1
ACTN1-209ENST00000553659 SIMC1Q8NDZ2 872 aa14.45□□□□□ -0.1
ACTN1-209ENST00000553659 C12orf43Q96C57 262 aaKnown RBP14.45□□□□□ -0.1
ACTN1-209ENST00000553659 SPACA9Q96E40 222 aaPredicted RBP14.45□□□□□ -0.1
ACTN1-209ENST00000553659 MPP4Q96JB8 637 aa14.45□□□□□ -0.1
ACTN1-209ENST00000553659 SLC38A2Q96QD8 506 aa14.45□□□□□ -0.1
ACTN1-209ENST00000553659 TRIM2Q9C040 744 aa14.45□□□□□ -0.1
ACTN1-209ENST00000553659 CLEC4MQ9H2X3 399 aaPredicted RBP14.45□□□□□ -0.1
ACTN1-209ENST00000553659 LIME1Q9H400 295 aa14.45□□□□□ -0.1
ACTN1-209ENST00000553659 ZNF703Q9H7S9 590 aaPredicted RBP14.45□□□□□ -0.1
ACTN1-209ENST00000553659 PROK2Q9HC23 129 aa14.45□□□□□ -0.1
ACTN1-209ENST00000553659 ZFP64Q9NPA5 681 aa14.45□□□□□ -0.1
ACTN1-209ENST00000553659 ACOT13Q9NPJ3 140 aa14.45□□□□□ -0.1
ACTN1-209ENST00000553659 RYDENQ9NUL5 291 aaKnown RBP14.45□□□□□ -0.1
ACTN1-209ENST00000553659 QPCTLQ9NXS2 382 aa14.45□□□□□ -0.1
ACTN1-209ENST00000553659 CNIH4Q9P003 139 aa14.45□□□□□ -0.1
ACTN1-209ENST00000553659 WARS2Q9UGM6 360 aaKnown RBP14.45□□□□□ -0.1
ACTN1-209ENST00000553659 CBLCQ9ULV8 474 aa14.45□□□□□ -0.1
ACTN1-209ENST00000553659 EDARQ9UNE0 448 aa14.45□□□□□ -0.1
ACTN1-209ENST00000553659 ERVK-19Q9WJR5 959 aa14.45□□□□□ -0.1
ACTN1-209ENST00000553659 RPL36Q9Y3U8 105 aaKnown RBP14.45□□□□□ -0.1
ACTN1-209ENST00000553659 OR10H1Q9Y4A9 318 aa14.45□□□□□ -0.1
ACTN1-209ENST00000553659 HTR3EA5X5Y0 456 aa14.44□□□□□ -0.1
ACTN1-209ENST00000553659 HOXB4P17483 251 aaPredicted RBP14.44□□□□□ -0.1
ACTN1-209ENST00000553659 CCNA2P20248 432 aa14.44□□□□□ -0.1
ACTN1-209ENST00000553659 SSTR4P31391 388 aa14.44□□□□□ -0.1
ACTN1-209ENST00000553659 RBM34P42696 430 aaKnown RBP14.44□□□□□ -0.1
ACTN1-209ENST00000553659 PCYT1AP49585 367 aa14.44□□□□□ -0.1
ACTN1-209ENST00000553659 ATP12AP54707 1039 aa14.44□□□□□ -0.1
ACTN1-209ENST00000553659 CDK5Q00535 292 aa14.44□□□□□ -0.1
ACTN1-209ENST00000553659 SLC27A4Q6P1M0 643 aa14.44□□□□□ -0.1
ACTN1-209ENST00000553659 SEM1Q6ZVN7 128 aa14.44□□□□□ -0.1
ACTN1-209ENST00000553659 HMGN2P46Q86SG4 172 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms