RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 NIPAL3Q6P499 406 aa11.77□□□□□ -0.53
PRPF39-204ENST00000553605 Q6ZPA2 131 aa11.77□□□□□ -0.53
PRPF39-204ENST00000553605 CREB3L2Q70SY1 520 aa11.77□□□□□ -0.53
PRPF39-204ENST00000553605 RELL1Q8IUW5 271 aa11.77□□□□□ -0.53
PRPF39-204ENST00000553605 FAM71CQ8NEG0 241 aa11.77□□□□□ -0.53
PRPF39-204ENST00000553605 OR56A1Q8NGH5 318 aa11.77□□□□□ -0.53
PRPF39-204ENST00000553605 OR5D16Q8NGK9 328 aa11.77□□□□□ -0.53
PRPF39-204ENST00000553605 CLHC1Q8NHS4 586 aa11.77□□□□□ -0.53
PRPF39-204ENST00000553605 CCT7Q99832 543 aa11.77□□□□□ -0.53
PRPF39-204ENST00000553605 RSPO3Q9BXY4 272 aaPredicted RBP11.77□□□□□ -0.53
PRPF39-204ENST00000553605 LINC00470Q9BZP3 86 aa11.77□□□□□ -0.53
PRPF39-204ENST00000553605 BAIAP2L1Q9UHR4 511 aa11.77□□□□□ -0.53
PRPF39-204ENST00000553605 DUSP13Q9UII6 198 aa11.77□□□□□ -0.53
PRPF39-204ENST00000553605 ZNF346Q9UL40 294 aaKnown RBP11.77□□□□□ -0.53
PRPF39-204ENST00000553605 MKLN1Q9UL63 735 aa11.77□□□□□ -0.53
PRPF39-204ENST00000553605 FZR1Q9UM11 496 aa11.77□□□□□ -0.53
PRPF39-204ENST00000553605 TMED7Q9Y3B3 224 aa11.77□□□□□ -0.53
PRPF39-204ENST00000553605 WIPI2Q9Y4P8 454 aa11.77□□□□□ -0.53
PRPF39-204ENST00000553605 CCL27Q9Y4X3 112 aa11.77□□□□□ -0.53
PRPF39-204ENST00000553605 ARHGAP32A7KAX9 2087 aa11.77□□□□□ -0.53
PRPF39-204ENST00000553605 PPIAL4EA0A075B759 164 aa11.76□□□□□ -0.53
PRPF39-204ENST00000553605 PPIAL4CA0A0B4J2A2 164 aa11.76□□□□□ -0.53
PRPF39-204ENST00000553605 ZC3H12DA2A288 527 aaKnown RBP11.76□□□□□ -0.53
PRPF39-204ENST00000553605 FAM187AA6NFU0 413 aa11.76□□□□□ -0.53
PRPF39-204ENST00000553605 AQP7P3A6NL99 342 aa11.76□□□□□ -0.53
PRPF39-204ENST00000553605 PPIAL4DF5H284 164 aa11.76□□□□□ -0.53
PRPF39-204ENST00000553605 BCAS1O75363 584 aaPredicted RBP11.76□□□□□ -0.53
PRPF39-204ENST00000553605 GPIP06744 558 aa11.76□□□□□ -0.53
PRPF39-204ENST00000553605 PPIAL4FP0DN26 164 aa11.76□□□□□ -0.53
PRPF39-204ENST00000553605 SDC1P18827 310 aa11.76□□□□□ -0.53
PRPF39-204ENST00000553605 CRYBB2P43320 205 aa11.76□□□□□ -0.53
PRPF39-204ENST00000553605 CAPZA2P47755 286 aa11.76□□□□□ -0.53
PRPF39-204ENST00000553605 CCL8P80075 99 aa11.76□□□□□ -0.53
PRPF39-204ENST00000553605 CAV1Q03135 178 aa11.76□□□□□ -0.53
PRPF39-204ENST00000553605 CEACAM7Q14002 265 aa11.76□□□□□ -0.53
PRPF39-204ENST00000553605 MMEL1Q495T6 779 aa11.76□□□□□ -0.53
PRPF39-204ENST00000553605 SPDYE7PQ495Y7 208 aa11.76□□□□□ -0.53
PRPF39-204ENST00000553605 GLIPR1L2Q4G1C9 344 aa11.76□□□□□ -0.53
PRPF39-204ENST00000553605 OLFML2AQ68BL7 652 aa11.76□□□□□ -0.53
PRPF39-204ENST00000553605 EMBQ6PCB8 327 aa11.76□□□□□ -0.53
PRPF39-204ENST00000553605 OLIG3Q7RTU3 272 aa11.76□□□□□ -0.53
PRPF39-204ENST00000553605 DEFB108BQ8NET1 73 aa11.76□□□□□ -0.53
PRPF39-204ENST00000553605 OR4F5Q8NH21 305 aa11.76□□□□□ -0.53
PRPF39-204ENST00000553605 FBXO25Q8TCJ0 367 aa11.76□□□□□ -0.53
PRPF39-204ENST00000553605 DCAKDQ8WVC6 231 aa11.76□□□□□ -0.53
PRPF39-204ENST00000553605 MTERF3Q96E29 417 aa11.76□□□□□ -0.53
PRPF39-204ENST00000553605 OSGIN1Q9UJX0 560 aa11.76□□□□□ -0.53
PRPF39-204ENST00000553605 SLC35A3Q9Y2D2 325 aa11.76□□□□□ -0.53
PRPF39-204ENST00000553605 A0A1W2PPW3 197 aa11.75□□□□□ -0.53
PRPF39-204ENST00000553605 TRIM49D1C9J1S8 452 aa11.75□□□□□ -0.53
PRPF39-204ENST00000553605 RPL36A-HNRNPH2H7BZ11 118 aa11.75□□□□□ -0.53
PRPF39-204ENST00000553605 INHBAP08476 426 aa11.75□□□□□ -0.53
PRPF39-204ENST00000553605 ZNF35P13682 527 aa11.75□□□□□ -0.53
PRPF39-204ENST00000553605 PRPH2P23942 346 aa11.75□□□□□ -0.53
PRPF39-204ENST00000553605 ATP5F1P24539 256 aaPredicted RBP11.75□□□□□ -0.53
PRPF39-204ENST00000553605 RBMXP38159 391 aaKnown RBP11.75□□□□□ -0.53
PRPF39-204ENST00000553605 PAFAH1B1P43034 410 aa11.75□□□□□ -0.53
PRPF39-204ENST00000553605 POLR2HP52434 150 aaKnown RBP11.75□□□□□ -0.53
PRPF39-204ENST00000553605 PRKAA2P54646 552 aa11.75□□□□□ -0.53
PRPF39-204ENST00000553605 TEKQ02763 1124 aa11.75□□□□□ -0.53
PRPF39-204ENST00000553605 OR7A5Q15622 319 aa11.75□□□□□ -0.53
PRPF39-204ENST00000553605 MAPK14Q16539 360 aa11.75□□□□□ -0.53
PRPF39-204ENST00000553605 TRMT5Q32P41 509 aaKnown RBP11.75□□□□□ -0.53
PRPF39-204ENST00000553605 ALKBH6Q3KRA9 238 aa11.75□□□□□ -0.53
PRPF39-204ENST00000553605 GKAP1Q5VSY0 366 aaPredicted RBP11.75□□□□□ -0.53
PRPF39-204ENST00000553605 R3HCC1LQ7Z5L2 792 aaKnown RBP11.75□□□□□ -0.53
PRPF39-204ENST00000553605 SLC22A9Q8IVM8 553 aa11.75□□□□□ -0.53
PRPF39-204ENST00000553605 CCDC36Q8IYA8 594 aa11.75□□□□□ -0.53
PRPF39-204ENST00000553605 GLB1L3Q8NCI6 653 aaPredicted RBP11.75□□□□□ -0.53
PRPF39-204ENST00000553605 ANKK1Q8NFD2 765 aa11.75□□□□□ -0.53
PRPF39-204ENST00000553605 RAB1CQ92928 201 aa11.75□□□□□ -0.53
PRPF39-204ENST00000553605 L3HYPDHQ96EM0 354 aa11.75□□□□□ -0.53
PRPF39-204ENST00000553605 TIMD4Q96H15 378 aa11.75□□□□□ -0.53
PRPF39-204ENST00000553605 MS4A3Q96HJ5 214 aa11.75□□□□□ -0.53
PRPF39-204ENST00000553605 MS4A7Q9GZW8 240 aaPredicted RBP11.75□□□□□ -0.53
PRPF39-204ENST00000553605 GSTO2Q9H4Y5 243 aa11.75□□□□□ -0.53
PRPF39-204ENST00000553605 C1orf109Q9NX04 203 aa11.75□□□□□ -0.53
PRPF39-204ENST00000553605 TMEM216Q9P0N5 145 aa11.75□□□□□ -0.53
PRPF39-204ENST00000553605 AUP1Q9Y679 476 aa11.75□□□□□ -0.53
PRPF39-204ENST00000553605 IGHV1-69-2A0A0G2JMI3 117 aa11.74□□□□□ -0.53
PRPF39-204ENST00000553605 LIPT2A6NK58 231 aa11.74□□□□□ -0.53
PRPF39-204ENST00000553605 SLC22A31A6NKX4 558 aa11.74□□□□□ -0.53
PRPF39-204ENST00000553605 C17orf100A8MU93 164 aa11.74□□□□□ -0.53
PRPF39-204ENST00000553605 CLDN25C9JDP6 229 aa11.74□□□□□ -0.53
PRPF39-204ENST00000553605 CRCPO75575 148 aa11.74□□□□□ -0.53
PRPF39-204ENST00000553605 ZNF432O94892 652 aa11.74□□□□□ -0.53
PRPF39-204ENST00000553605 GPANK1O95872 356 aa11.74□□□□□ -0.53
PRPF39-204ENST00000553605 AK1P00568 194 aa11.74□□□□□ -0.53
PRPF39-204ENST00000553605 VSIG8P0DPA2 414 aa11.74□□□□□ -0.53
PRPF39-204ENST00000553605 TACR3P29371 465 aa11.74□□□□□ -0.53
PRPF39-204ENST00000553605 PHBP35232 272 aa11.74□□□□□ -0.53
PRPF39-204ENST00000553605 MTNR1AP48039 350 aa11.74□□□□□ -0.53
PRPF39-204ENST00000553605 MAP2K6P52564 334 aa11.74□□□□□ -0.53
PRPF39-204ENST00000553605 RAG2P55895 527 aa11.74□□□□□ -0.53
PRPF39-204ENST00000553605 KRTAP10-3P60369 221 aa11.74□□□□□ -0.53
PRPF39-204ENST00000553605 RPS23P62266 143 aaKnown RBP11.74□□□□□ -0.53
PRPF39-204ENST00000553605 TAF9Q16594 264 aa11.74□□□□□ -0.53
PRPF39-204ENST00000553605 FXNQ16595 210 aa11.74□□□□□ -0.53
PRPF39-204ENST00000553605 NKPD1Q17RQ9 610 aa11.74□□□□□ -0.53
PRPF39-204ENST00000553605 ARHGAP11BQ3KRB8 267 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms