RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-222	ENST00000553570	KRT84	Q9NSB2	600 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	DEPP	Q9NTK1	212 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	ZCCHC3	Q9NUD5	404 aa	Known RBP	4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	B4GALT7	Q9UBV7	327 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	PLEKHB1	Q9UF11	243 aa	Predicted RBP	4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	ATP6V1H	Q9UI12	483 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	BOK	Q9UMX3	212 aa	Predicted RBP	4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	PCDHGB5	Q9Y5G0	923 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	USH1C	Q9Y6N9	552 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	GCN1	Q92616	2671 aa	Known RBP	4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	POLE	Q07864	2286 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	ZNF462	Q96JM2	2506 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	SPTBN1	Q01082	2364 aa	Known RBP	4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	FASN	P49327	2511 aa	Known RBP	4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	C15orf38-AP3S2	A0A0A6YYH1	394 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	TRGV5	A0A0B4J1U4	118 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570		A0A0G2JK05	382 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570		A0A0G2JND7	137 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570		A0A1B0GUH1	482 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	FRG2C	A6NGY1	282 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	CBY3	A6NI87	242 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570		E9PBE3	544 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	ACOX3	O15254	700 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	SLC25A17	O43808	307 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	DOK2	O60496	412 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	PLOD3	O60568	738 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	UGT2B11	O75310	529 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	SNN	O75324	88 aa	Predicted RBP	4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	NADK	O95544	446 aa	Predicted RBP	4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	NUDT14	O95848	222 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	HMGN2	P05204	90 aa	Known RBP	4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	EDN2	P20800	178 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	ATP6V1C1	P21283	382 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	GCK	P35557	465 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	CASP3	P42574	277 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	POLR2J	P52435	117 aa	Known RBP	4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	CLNS1A	P54105	237 aa	Known RBP	4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	PSMD4	P55036	377 aa	Known RBP	4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	MRPS22	P82650	360 aa	Known RBP	4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	ZNF91	Q05481	1191 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	LASP1	Q14847	261 aa	Known RBP	4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	NTRK2	Q16620	822 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	FAM174B	Q3ZCQ3	159 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	VPS26B	Q4G0F5	336 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	GPAT3	Q53EU6	434 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	AGK	Q53H12	422 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	ALG10	Q5BKT4	473 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	ALG10B	Q5I7T1	473 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	PIK3CD-AS1	Q5SR53	167 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	CCNJ	Q5T5M9	372 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	LCE1A	Q5T7P2	110 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	SERTAD4-AS1	Q5TG53	156 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	SLC30A6	Q6NXT4	461 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	EPGN	Q6UW88	154 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	DEF8	Q6ZN54	512 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	CHMP1B	Q7LBR1	199 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	C16orf62	Q7Z3J2	963 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	PXK	Q7Z7A4	578 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	YRDC	Q86U90	279 aa	Known RBP	4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	MARCH3	Q86UD3	253 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	GPAT4	Q86UL3	456 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	DND1	Q8IYX4	353 aa	Known RBP	4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	FBXW8	Q8N3Y1	598 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	ARFGAP2	Q8N6H7	521 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	TMEM251	Q8N6I4	163 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	NATD1	Q8N6N6	113 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570		Q8N9P0	234 aa	Predicted RBP	4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	GATS	Q8NAP1	163 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	ST6GALNAC3	Q8NDV1	305 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	OR4K17	Q8NGC6	315 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	OR14L1P	Q8NHC6	308 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	PNPT1	Q8TCS8	783 aa	Known RBP	4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	SPPL2A	Q8TCT8	520 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	DUSP19	Q8WTR2	217 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	TMEM170A	Q8WVE7	144 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	CKAP2	Q8WWK9	683 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	CDS1	Q92903	461 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	COQ8B	Q96D53	544 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	MSI2	Q96DH6	328 aa	Known RBP	4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	C11orf24	Q96F05	449 aa	Predicted RBP	4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	SLC35G5	Q96KT7	338 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	ZNF597	Q96LX8	424 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	GPR137	Q96N19	417 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	OR52B2	Q96RD2	323 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	PANX1	Q96RD7	426 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	SH3GL2	Q99962	352 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	TREX2	Q9BQ50	279 aa	Predicted RBP	4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	INPP5K	Q9BT40	448 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	TTTY12	Q9BZ98	90 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	TBL1XR1	Q9BZK7	514 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	PRSS22	Q9GZN4	317 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	DSN1	Q9H410	356 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	IL1RL2	Q9HB29	575 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	TCF7L2	Q9NQB0	619 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	ACSS1	Q9NUB1	689 aa	Predicted RBP	4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	ZNF446	Q9NWS9	450 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	GIN1	Q9NXP7	522 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	TAS2R7	Q9NYW3	318 aa		4.23	□□□□□ -1.73
ATXN3-222	ENST00000553570	MED11	Q9P086	117 aa		4.23	□□□□□ -1.73

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