RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 GID8Q9NWU2 228 aa10.42□□□□□ -0.74
CKAP4-202ENST00000552828 EMC3Q9P0I2 261 aa10.42□□□□□ -0.74
CKAP4-202ENST00000552828 ZNF232Q9UNY5 417 aa10.42□□□□□ -0.74
CKAP4-202ENST00000552828 ARL2BPQ9Y2Y0 163 aa10.42□□□□□ -0.74
CKAP4-202ENST00000552828 SLC25A15Q9Y619 301 aa10.42□□□□□ -0.74
CKAP4-202ENST00000552828 PLCE1Q9P212 2302 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 DSPPQ9NZW4 1301 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 ZNF716A6NP11 495 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 H7C417 338 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 SULT2B1O00204 365 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 PHF1O43189 567 aaPredicted RBP10.41□□□□□ -0.74
CKAP4-202ENST00000552828 ARAFP10398 606 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 COX4I1P13073 169 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 SLC25A16P16260 332 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 PTNP21246 168 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 RPS4Y1P22090 263 aaKnown RBP10.41□□□□□ -0.74
CKAP4-202ENST00000552828 SLC6A2P23975 617 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 CD40P25942 277 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 NTF4P34130 210 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 PGM1P36871 562 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 NUDT6P53370 316 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 SLC16A1P53985 500 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 MTPNP58546 118 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 CDK6Q00534 326 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 LARS2Q15031 903 aaKnown RBP10.41□□□□□ -0.74
CKAP4-202ENST00000552828 CYP51A1Q16850 503 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 ZSWIM7Q19AV6 140 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 SYT14P1Q58G82 188 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 RPS26P11Q5JNZ5 115 aaPredicted RBP10.41□□□□□ -0.74
CKAP4-202ENST00000552828 NANOGP8Q6NSW7 305 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 REEP3Q6NUK4 255 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 ZNF544Q6NX49 715 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 KLHL17Q6TDP4 642 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 CLEC2AQ6UVW9 174 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 C10orf67Q8IYJ2 551 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 C10orf111Q8N326 155 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 MUC15Q8N387 334 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 POU5F2Q8N7G0 328 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 OR8J3Q8NGG0 315 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 OR52P1PQ8NH57 321 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 NFKBIDQ8NI38 313 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 BBS10Q8TAM1 723 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 TMEM234Q8WY98 164 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 CMTM5Q96DZ9 223 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 MYLK2Q9H1R3 596 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 ARMC7Q9H6L4 198 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 KAT8Q9H7Z6 458 aaKnown RBP10.41□□□□□ -0.74
CKAP4-202ENST00000552828 NANOGQ9H9S0 305 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 MALT1Q9UDY8 824 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 IFT52Q9Y366 437 aa10.41□□□□□ -0.74
CKAP4-202ENST00000552828 CLDN24A6NM45 220 aa10.4□□□□□ -0.74
CKAP4-202ENST00000552828 PDLIM1O00151 329 aa10.4□□□□□ -0.74
CKAP4-202ENST00000552828 DNPH1O43598 174 aa10.4□□□□□ -0.74
CKAP4-202ENST00000552828 PMS2P2O95744 297 aa10.4□□□□□ -0.74
CKAP4-202ENST00000552828 ETS2P15036 469 aa10.4□□□□□ -0.74
CKAP4-202ENST00000552828 PGCP20142 388 aa10.4□□□□□ -0.74
CKAP4-202ENST00000552828 FKBP2P26885 142 aaKnown RBP10.4□□□□□ -0.74
CKAP4-202ENST00000552828 APOBEC1P41238 236 aaKnown RBP10.4□□□□□ -0.74
CKAP4-202ENST00000552828 CLK1P49759 484 aaKnown RBP10.4□□□□□ -0.74
CKAP4-202ENST00000552828 RBBP4Q09028 425 aa10.4□□□□□ -0.74
CKAP4-202ENST00000552828 MERTKQ12866 999 aa10.4□□□□□ -0.74
CKAP4-202ENST00000552828 SCARB2Q14108 478 aa10.4□□□□□ -0.74
CKAP4-202ENST00000552828 SELPLGQ14242 412 aa10.4□□□□□ -0.74
CKAP4-202ENST00000552828 RAB35Q15286 201 aa10.4□□□□□ -0.74
CKAP4-202ENST00000552828 ADRM1Q16186 407 aa10.4□□□□□ -0.74
CKAP4-202ENST00000552828 GABRA6Q16445 453 aa10.4□□□□□ -0.74
CKAP4-202ENST00000552828 LIN52Q52LA3 116 aa10.4□□□□□ -0.74
CKAP4-202ENST00000552828 C1QTNF12Q5T7M4 302 aa10.4□□□□□ -0.74
CKAP4-202ENST00000552828 GKAP1Q5VSY0 366 aaPredicted RBP10.4□□□□□ -0.74
CKAP4-202ENST00000552828 OR7E24Q6IFN5 339 aa10.4□□□□□ -0.74
CKAP4-202ENST00000552828 SLC22A25Q6T423 547 aa10.4□□□□□ -0.74
CKAP4-202ENST00000552828 B3GLCTQ6Y288 498 aa10.4□□□□□ -0.74
CKAP4-202ENST00000552828 SERPINA11Q86U17 422 aa10.4□□□□□ -0.74
CKAP4-202ENST00000552828 KRT73Q86Y46 540 aa10.4□□□□□ -0.74
CKAP4-202ENST00000552828 TREML1Q86YW5 311 aa10.4□□□□□ -0.74
CKAP4-202ENST00000552828 FBXL14Q8N1E6 418 aa10.4□□□□□ -0.74
CKAP4-202ENST00000552828 C11orf65Q8NCR3 313 aa10.4□□□□□ -0.74
CKAP4-202ENST00000552828 FAM71CQ8NEG0 241 aa10.4□□□□□ -0.74
CKAP4-202ENST00000552828 OR10A6Q8NH74 314 aa10.4□□□□□ -0.74
CKAP4-202ENST00000552828 PROX1Q92786 737 aa10.4□□□□□ -0.74
CKAP4-202ENST00000552828 APH1AQ96BI3 265 aa10.4□□□□□ -0.74
CKAP4-202ENST00000552828 RCN3Q96D15 328 aa10.4□□□□□ -0.74
CKAP4-202ENST00000552828 LRRC37BQ96QE4 947 aa10.4□□□□□ -0.74
CKAP4-202ENST00000552828 ECSITQ9BQ95 431 aa10.4□□□□□ -0.74
CKAP4-202ENST00000552828 AMBRA1Q9C0C7 1298 aa10.4□□□□□ -0.74
CKAP4-202ENST00000552828 EFCAB1Q9HAE3 211 aa10.4□□□□□ -0.74
CKAP4-202ENST00000552828 EXOSC3Q9NQT5 275 aaKnown RBP10.4□□□□□ -0.74
CKAP4-202ENST00000552828 ASB6Q9NWX5 421 aa10.4□□□□□ -0.74
CKAP4-202ENST00000552828 TAS2R16Q9NYV7 291 aa10.4□□□□□ -0.74
CKAP4-202ENST00000552828 LPAR3Q9UBY5 353 aa10.4□□□□□ -0.74
CKAP4-202ENST00000552828 ALPK2Q86TB3 2170 aa10.39□□□□□ -0.75
CKAP4-202ENST00000552828 FXYD1O00168 92 aa10.39□□□□□ -0.75
CKAP4-202ENST00000552828 GPR171O14626 319 aa10.39□□□□□ -0.75
CKAP4-202ENST00000552828 AIM2O14862 343 aa10.39□□□□□ -0.75
CKAP4-202ENST00000552828 BCAS1O75363 584 aaPredicted RBP10.39□□□□□ -0.75
CKAP4-202ENST00000552828 SERPINB7O75635 380 aa10.39□□□□□ -0.75
CKAP4-202ENST00000552828 RAD51DO75771 328 aa10.39□□□□□ -0.75
CKAP4-202ENST00000552828 DCTN3O75935 186 aa10.39□□□□□ -0.75
CKAP4-202ENST00000552828 UQCRBP14927 111 aa10.39□□□□□ -0.75
CKAP4-202ENST00000552828 RYKP34925 604 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms