RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 ASPNQ9BXN1 380 aa16.38■□□□□ 0.21
PRPF40B-216ENST00000552301 HDHD5Q9BXW7 423 aa16.38■□□□□ 0.21
PRPF40B-216ENST00000552301 PRSS50Q9UI38 385 aa16.38■□□□□ 0.21
PRPF40B-216ENST00000552301 CORINQ9Y5Q5 1042 aa16.38■□□□□ 0.21
PRPF40B-216ENST00000552301 TEX15Q9BXT5 2789 aa16.37■□□□□ 0.21
PRPF40B-216ENST00000552301 M0R082 166 aa16.37■□□□□ 0.21
PRPF40B-216ENST00000552301 OR5F1O95221 314 aa16.37■□□□□ 0.21
PRPF40B-216ENST00000552301 GOSR1O95249 250 aa16.37■□□□□ 0.21
PRPF40B-216ENST00000552301 CNOT4O95628 575 aaKnown RBP16.37■□□□□ 0.21
PRPF40B-216ENST00000552301 ADAP00813 363 aa16.37■□□□□ 0.21
PRPF40B-216ENST00000552301 SERPINA1P01009 418 aa16.37■□□□□ 0.21
PRPF40B-216ENST00000552301 IFNW1P05000 195 aa16.37■□□□□ 0.21
PRPF40B-216ENST00000552301 NQO1P15559 274 aaKnown RBP16.37■□□□□ 0.21
PRPF40B-216ENST00000552301 NCK1P16333 377 aa16.37■□□□□ 0.21
PRPF40B-216ENST00000552301 GGT1P19440 569 aa16.37■□□□□ 0.21
PRPF40B-216ENST00000552301 CBLP22681 906 aa16.37■□□□□ 0.21
PRPF40B-216ENST00000552301 GRPRP30550 384 aa16.37■□□□□ 0.21
PRPF40B-216ENST00000552301 SLC25A3Q00325 362 aa16.37■□□□□ 0.21
PRPF40B-216ENST00000552301 DAZAP2Q15038 168 aaPredicted RBP16.37■□□□□ 0.21
PRPF40B-216ENST00000552301 IFI44LQ53G44 452 aa16.37■□□□□ 0.21
PRPF40B-216ENST00000552301 FKBP9P1Q75LS8 142 aa16.37■□□□□ 0.21
PRPF40B-216ENST00000552301 RNF148Q8N7C7 305 aa16.37■□□□□ 0.21
PRPF40B-216ENST00000552301 OR6S1Q8NH40 331 aa16.37■□□□□ 0.21
PRPF40B-216ENST00000552301 ZNF417Q8TAU3 575 aa16.37■□□□□ 0.21
PRPF40B-216ENST00000552301 BCAS4Q8TDM0 211 aa16.37■□□□□ 0.21
PRPF40B-216ENST00000552301 GEMIN6Q8WXD5 167 aaKnown RBP16.37■□□□□ 0.21
PRPF40B-216ENST00000552301 KISS1RQ969F8 398 aaPredicted RBP16.37■□□□□ 0.21
PRPF40B-216ENST00000552301 NSL1Q96IY1 281 aa16.37■□□□□ 0.21
PRPF40B-216ENST00000552301 LURAP1Q96LR2 239 aa16.37■□□□□ 0.21
PRPF40B-216ENST00000552301 WFIKKN1Q96NZ8 548 aa16.37■□□□□ 0.21
PRPF40B-216ENST00000552301 ZNF587Q96SQ5 575 aaPredicted RBP16.37■□□□□ 0.21
PRPF40B-216ENST00000552301 ACTR6Q9GZN1 396 aa16.37■□□□□ 0.21
PRPF40B-216ENST00000552301 UPB1Q9UBR1 384 aa16.37■□□□□ 0.21
PRPF40B-216ENST00000552301 EGFL7Q9UHF1 273 aa16.37■□□□□ 0.21
PRPF40B-216ENST00000552301 RPS6KA6Q9UK32 745 aa16.37■□□□□ 0.21
PRPF40B-216ENST00000552301 B3GALT5Q9Y2C3 310 aa16.37■□□□□ 0.21
PRPF40B-216ENST00000552301 CRYBG3Q68DQ2 2970 aa16.37■□□□□ 0.21
PRPF40B-216ENST00000552301 CTAG2O75638 210 aa16.36■□□□□ 0.21
PRPF40B-216ENST00000552301 IGHV3-9P01782 118 aa16.36■□□□□ 0.21
PRPF40B-216ENST00000552301 ZNF43P17038 809 aa16.36■□□□□ 0.21
PRPF40B-216ENST00000552301 TCN1P20061 433 aaPredicted RBP16.36■□□□□ 0.21
PRPF40B-216ENST00000552301 ITGADQ13349 1161 aa16.36■□□□□ 0.21
PRPF40B-216ENST00000552301 C1DQ13901 141 aaKnown RBP16.36■□□□□ 0.21
PRPF40B-216ENST00000552301 SFRP5Q5T4F7 317 aa16.36■□□□□ 0.21
PRPF40B-216ENST00000552301 FBXW9Q5XUX1 488 aa16.36■□□□□ 0.21
PRPF40B-216ENST00000552301 CBLL1Q75N03 491 aa16.36■□□□□ 0.21
PRPF40B-216ENST00000552301 AAED1Q7RTV5 226 aa16.36■□□□□ 0.21
PRPF40B-216ENST00000552301 VTCN1Q7Z7D3 282 aa16.36■□□□□ 0.21
PRPF40B-216ENST00000552301 DEFB107AQ8IZN7 70 aa16.36■□□□□ 0.21
PRPF40B-216ENST00000552301 TMEM45BQ96B21 275 aa16.36■□□□□ 0.21
PRPF40B-216ENST00000552301 HSH2DQ96JZ2 352 aa16.36■□□□□ 0.21
PRPF40B-216ENST00000552301 POLDIP3Q9BY77 421 aaKnown RBP16.36■□□□□ 0.21
PRPF40B-216ENST00000552301 OR10A4Q9H209 315 aa16.36■□□□□ 0.21
PRPF40B-216ENST00000552301 CLEC4MQ9H2X3 399 aaPredicted RBP16.36■□□□□ 0.21
PRPF40B-216ENST00000552301 KPNA4O00629 521 aaPredicted RBP16.35■□□□□ 0.21
PRPF40B-216ENST00000552301 AKAP8O43823 692 aaKnown RBP16.35■□□□□ 0.21
PRPF40B-216ENST00000552301 MT-ATP6P00846 226 aa16.35■□□□□ 0.21
PRPF40B-216ENST00000552301 CALB2P22676 271 aa16.35■□□□□ 0.21
PRPF40B-216ENST00000552301 P2RY4P51582 365 aa16.35■□□□□ 0.21
PRPF40B-216ENST00000552301 PMS2P3Q13401 168 aa16.35■□□□□ 0.21
PRPF40B-216ENST00000552301 GLYATQ6IB77 296 aa16.35■□□□□ 0.21
PRPF40B-216ENST00000552301 H1FNTQ75WM6 255 aaPredicted RBP16.35■□□□□ 0.21
PRPF40B-216ENST00000552301 BHLHA15Q7RTS1 189 aaPredicted RBP16.35■□□□□ 0.21
PRPF40B-216ENST00000552301 SCAIQ8N9R8 606 aa16.35■□□□□ 0.21
PRPF40B-216ENST00000552301 ADPRHL1Q8NDY3 354 aa16.35■□□□□ 0.21
PRPF40B-216ENST00000552301 PRRC1Q96M27 445 aa16.35■□□□□ 0.21
PRPF40B-216ENST00000552301 CDRT15Q96T59 188 aa16.35■□□□□ 0.21
PRPF40B-216ENST00000552301 USB1Q9BQ65 265 aaKnown RBP16.35■□□□□ 0.21
PRPF40B-216ENST00000552301 SLC19A3Q9BZV2 496 aa16.35■□□□□ 0.21
PRPF40B-216ENST00000552301 RASSF1Q9NS23 344 aa16.35■□□□□ 0.21
PRPF40B-216ENST00000552301 ASB6Q9NWX5 421 aa16.35■□□□□ 0.21
PRPF40B-216ENST00000552301 MAGEL2Q9UJ55 1249 aa16.35■□□□□ 0.21
PRPF40B-216ENST00000552301 RIMS3Q9UJD0 308 aa16.35■□□□□ 0.21
PRPF40B-216ENST00000552301 ABCA4P78363 2273 aa16.34■□□□□ 0.21
PRPF40B-216ENST00000552301 CELSR2Q9HCU4 2923 aa16.34■□□□□ 0.21
PRPF40B-216ENST00000552301 B2RBV5 119 aa16.34■□□□□ 0.21
PRPF40B-216ENST00000552301 FZD7O75084 574 aa16.34■□□□□ 0.21
PRPF40B-216ENST00000552301 LYZL6O75951 148 aa16.34■□□□□ 0.21
PRPF40B-216ENST00000552301 KRT33AO76009 404 aa16.34■□□□□ 0.21
PRPF40B-216ENST00000552301 OR6A2O95222 327 aa16.34■□□□□ 0.21
PRPF40B-216ENST00000552301 BGLAPP02818 100 aa16.34■□□□□ 0.21
PRPF40B-216ENST00000552301 THY1P04216 161 aa16.34■□□□□ 0.21
PRPF40B-216ENST00000552301 THRBP10828 461 aa16.34■□□□□ 0.21
PRPF40B-216ENST00000552301 HSD17B1P14061 328 aa16.34■□□□□ 0.21
PRPF40B-216ENST00000552301 EDNRAP25101 427 aa16.34■□□□□ 0.21
PRPF40B-216ENST00000552301 ST3GAL3Q11203 375 aa16.34■□□□□ 0.21
PRPF40B-216ENST00000552301 FOXD4Q12950 439 aaPredicted RBP16.34■□□□□ 0.21
PRPF40B-216ENST00000552301 PIN1Q13526 163 aaPredicted RBP16.34■□□□□ 0.21
PRPF40B-216ENST00000552301 POU4F3Q15319 338 aa16.34■□□□□ 0.21
PRPF40B-216ENST00000552301 LINC00114Q6XXX2 140 aa16.34■□□□□ 0.21
PRPF40B-216ENST00000552301 WDR88Q6ZMY6 472 aa16.34■□□□□ 0.21
PRPF40B-216ENST00000552301 TSPYL5Q86VY4 417 aaPredicted RBP16.34■□□□□ 0.21
PRPF40B-216ENST00000552301 WFDC8Q8IUA0 241 aa16.34■□□□□ 0.21
PRPF40B-216ENST00000552301 UEVLDQ8IX04 471 aa16.34■□□□□ 0.21
PRPF40B-216ENST00000552301 FAM156AQ8NDB6 213 aa16.34■□□□□ 0.21
PRPF40B-216ENST00000552301 S100PBPQ96BU1 408 aa16.34■□□□□ 0.21
PRPF40B-216ENST00000552301 OXGR1Q96P68 337 aa16.34■□□□□ 0.21
PRPF40B-216ENST00000552301 ZNF385AQ96PM9 386 aaKnown RBP16.34■□□□□ 0.21
PRPF40B-216ENST00000552301 MRPL39Q9NYK5 338 aaKnown RBP16.34■□□□□ 0.21
PRPF40B-216ENST00000552301 SEC14L4Q9UDX3 406 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms