RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 INTS14Q96SY0 518 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 QRSL1Q9H0R6 528 aaKnown RBP11.25□□□□□ -0.61
NR4A1-215ENST00000550557 CXorf36Q9H7Y0 433 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 TRAV36DV7A0A075B6V5 113 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 A0A1W2PR48 441 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 CLDN24A6NM45 220 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 HRO43593 1189 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 CELA2BP08218 269 aaPredicted RBP11.25□□□□□ -0.61
NR4A1-215ENST00000550557 FTH1P19P0C7X4 201 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 FKBP2P26885 142 aaKnown RBP11.25□□□□□ -0.61
NR4A1-215ENST00000550557 SCGB2B2Q4G0G5 96 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 DESI1Q6ICB0 168 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 TCTN3Q6NUS6 607 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 RAB9BQ9NP90 201 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 PAQR5Q9NXK6 330 aaPredicted RBP11.25□□□□□ -0.61
NR4A1-215ENST00000550557 STUB1Q9UNE7 303 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 TRAV27A0A087WT01 109 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 TVP23AA6NH52 213 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 KDM4EB2RXH2 506 aaPredicted RBP11.25□□□□□ -0.61
NR4A1-215ENST00000550557 PTGS2P35354 604 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 SOX3P41225 446 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 OR1C1Q15619 314 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 MICAQ29983 383 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 IQCF1Q8N6M8 205 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 RHOXF1Q8NHV9 184 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 NPRL2Q8WTW4 380 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 S100A16Q96FQ6 103 aaKnown RBP11.25□□□□□ -0.61
NR4A1-215ENST00000550557 MICU1Q9BPX6 476 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 ALG5Q9Y673 324 aa11.25□□□□□ -0.61
NR4A1-215ENST00000550557 TEX13DA0A0J9YY54 714 aaPredicted RBP11.24□□□□□ -0.61
NR4A1-215ENST00000550557 A0A1B0GTL3 188 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 A8MVM7 634 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 ZNF814B7Z6K7 855 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 ELAVL4P26378 380 aaKnown RBP11.24□□□□□ -0.61
NR4A1-215ENST00000550557 MTNR1AP48039 350 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 EFNA3P52797 238 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 BDH1Q02338 343 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 SSPNQ14714 243 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 FAM205BPQ63HN1 556 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 FAM71E1Q6IPT2 247 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 C3orf33Q6P1S2 294 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 BAIAP2L2Q6UXY1 529 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 CARFQ8N187 725 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 VRK1Q99986 396 aaPredicted RBP11.24□□□□□ -0.61
NR4A1-215ENST00000550557 FUZQ9BT04 418 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 FBXL4Q9UKA2 621 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 PPIL1Q9Y3C6 166 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 ARID1BQ8NFD5 2236 aaPredicted RBP11.24□□□□□ -0.61
NR4A1-215ENST00000550557 A0A1W2PQF6 199 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 TCRBV5S2A0A599 114 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 SMIM30A4D0T7 59 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 IFNA21P01568 189 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 PIGAP37287 484 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 FRKP42685 505 aaPredicted RBP11.24□□□□□ -0.61
NR4A1-215ENST00000550557 SPHARQ15513 63 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 ZNF704Q6ZNC4 412 aaPredicted RBP11.24□□□□□ -0.61
NR4A1-215ENST00000550557 GRINAQ7Z429 371 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 PM20D2Q8IYS1 436 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 LSM14AQ8ND56 463 aaKnown RBP11.24□□□□□ -0.61
NR4A1-215ENST00000550557 OR1L3Q8NH93 324 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 ZNF486Q96H40 463 aaPredicted RBP11.24□□□□□ -0.61
NR4A1-215ENST00000550557 RBM38Q9H0Z9 239 aaKnown RBP11.24□□□□□ -0.61
NR4A1-215ENST00000550557 SLC6A20Q9NP91 592 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 DECR2Q9NUI1 292 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 A0A1W2PPK0 400 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 GALR2O43603 387 aaPredicted RBP11.24□□□□□ -0.61
NR4A1-215ENST00000550557 ABHD16AO95870 558 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 CDK1P06493 297 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 CD1EP15812 388 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 SMN1Q16637 294 aaKnown RBP11.24□□□□□ -0.61
NR4A1-215ENST00000550557 COL28A1Q2UY09 1125 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 GXYLT1Q4G148 440 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 ZNF766Q5HY98 468 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 ZNF782Q6ZMW2 699 aaPredicted RBP11.24□□□□□ -0.61
NR4A1-215ENST00000550557 TMPRSS12Q86WS5 348 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 WFDC8Q8IUA0 241 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 OR9Q2Q8NGE9 314 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 OR5M1Q8NGP8 315 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 ERVMER34-1Q9H9K5 563 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 C19orf53Q9UNZ5 99 aaPredicted RBP11.24□□□□□ -0.61
NR4A1-215ENST00000550557 LHX6Q9UPM6 363 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 L7N2F9 121 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 PRH1P02810 166 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 POLR2IP36954 125 aaKnown RBP11.24□□□□□ -0.61
NR4A1-215ENST00000550557 DHRS4L2Q6PKH6 230 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 CMIPQ8IY22 773 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 GALNT16Q8N428 558 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 THAP6Q8TBB0 222 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 SLC38A5Q8WUX1 472 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 TMEM246Q9BRR3 403 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 OR52D1Q9H346 318 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 LHX9Q9NQ69 397 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 DUSP22Q9NRW4 184 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 B3GALT1Q9Y5Z6 326 aa11.24□□□□□ -0.61
NR4A1-215ENST00000550557 PLXNA1Q9UIW2 1896 aa11.23□□□□□ -0.61
NR4A1-215ENST00000550557 TSPAN4O14817 238 aa11.23□□□□□ -0.61
NR4A1-215ENST00000550557 TOX3O15405 576 aaPredicted RBP11.23□□□□□ -0.61
NR4A1-215ENST00000550557 PRKYO43930 277 aa11.23□□□□□ -0.61
NR4A1-215ENST00000550557 GABARAPO95166 117 aa11.23□□□□□ -0.61
NR4A1-215ENST00000550557 FCER2P06734 321 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms