RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 OR6C76A6NM76 312 aa11.15□□□□□ -0.62
VDR-208ENST00000550325 EEF1E1-BLOC1S5C9J1V9 151 aa11.15□□□□□ -0.62
VDR-208ENST00000550325 GP1BAP07359 652 aa11.15□□□□□ -0.62
VDR-208ENST00000550325 APEHP13798 732 aaKnown RBP11.15□□□□□ -0.62
VDR-208ENST00000550325 AK4P27144 223 aaPredicted RBP11.15□□□□□ -0.62
VDR-208ENST00000550325 RAB5BP61020 215 aa11.15□□□□□ -0.62
VDR-208ENST00000550325 SRSF3P84103 164 aaKnown RBP11.15□□□□□ -0.62
VDR-208ENST00000550325 RANBP3LQ86VV4 465 aaPredicted RBP11.15□□□□□ -0.62
VDR-208ENST00000550325 LURAP1LQ8IV03 231 aa11.15□□□□□ -0.62
VDR-208ENST00000550325 TMIEQ8NEW7 156 aa11.15□□□□□ -0.62
VDR-208ENST00000550325 TFGQ92734 400 aaPredicted RBP11.15□□□□□ -0.62
VDR-208ENST00000550325 ZC3H10Q96K80 434 aaKnown RBP11.15□□□□□ -0.62
VDR-208ENST00000550325 TNFRSF13CQ96RJ3 184 aa11.15□□□□□ -0.62
VDR-208ENST00000550325 TLNRD1Q9H1K6 362 aa11.15□□□□□ -0.62
VDR-208ENST00000550325 HRH4Q9H3N8 390 aa11.15□□□□□ -0.62
VDR-208ENST00000550325 PIGMQ9H3S5 423 aa11.15□□□□□ -0.62
VDR-208ENST00000550325 ZMAT3Q9HA38 289 aaKnown RBP11.15□□□□□ -0.62
VDR-208ENST00000550325 CENPVL1A0A0U1RR11 272 aa11.15□□□□□ -0.62
VDR-208ENST00000550325 C13orf42A0A1B0GVH6 325 aa11.15□□□□□ -0.62
VDR-208ENST00000550325 OR5H14A6NHG9 310 aa11.15□□□□□ -0.62
VDR-208ENST00000550325 CD3DP04234 171 aa11.15□□□□□ -0.62
VDR-208ENST00000550325 IL5P05113 134 aa11.15□□□□□ -0.62
VDR-208ENST00000550325 IL9P15248 144 aa11.15□□□□□ -0.62
VDR-208ENST00000550325 CSNK2A2P19784 350 aaPredicted RBP11.15□□□□□ -0.62
VDR-208ENST00000550325 NKPD1Q17RQ9 610 aa11.15□□□□□ -0.62
VDR-208ENST00000550325 DPPA4Q7L190 304 aa11.15□□□□□ -0.62
VDR-208ENST00000550325 GLYATL2Q8WU03 294 aa11.15□□□□□ -0.62
VDR-208ENST00000550325 CNRIP1Q96F85 164 aaPredicted RBP11.15□□□□□ -0.62
VDR-208ENST00000550325 BCL2L10Q9HD36 194 aa11.15□□□□□ -0.62
VDR-208ENST00000550325 OR2S2Q9NQN1 319 aa11.15□□□□□ -0.62
VDR-208ENST00000550325 MIOXQ9UGB7 285 aa11.15□□□□□ -0.62
VDR-208ENST00000550325 ST6GALNAC2Q9UJ37 374 aa11.15□□□□□ -0.62
VDR-208ENST00000550325 MKL2Q9ULH7 1088 aa11.15□□□□□ -0.62
VDR-208ENST00000550325 RPH3AQ9Y2J0 694 aaPredicted RBP11.15□□□□□ -0.62
VDR-208ENST00000550325 CTDSPLO15194 276 aa11.15□□□□□ -0.63
VDR-208ENST00000550325 RPN2P04844 631 aa11.15□□□□□ -0.63
VDR-208ENST00000550325 PPT1P50897 306 aa11.15□□□□□ -0.63
VDR-208ENST00000550325 ST8SIA6P61647 398 aa11.15□□□□□ -0.63
VDR-208ENST00000550325 ZNF627Q7L945 461 aa11.15□□□□□ -0.63
VDR-208ENST00000550325 SLC35F2Q8IXU6 374 aa11.15□□□□□ -0.63
VDR-208ENST00000550325 INO80EQ8NBZ0 244 aaPredicted RBP11.15□□□□□ -0.63
VDR-208ENST00000550325 ADAP2Q9NPF8 381 aa11.15□□□□□ -0.63
VDR-208ENST00000550325 IKZF2Q9UKS7 526 aa11.15□□□□□ -0.63
VDR-208ENST00000550325 SCN3AQ9NY46 2000 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 TMEM272A0A1B0GTI8 110 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 J3QRE1 110 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 TBX6O95947 436 aaPredicted RBP11.14□□□□□ -0.63
VDR-208ENST00000550325 IFNGP01579 166 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 GALTP07902 379 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 F3P13726 295 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 PPIAP62937 165 aaKnown RBP11.14□□□□□ -0.63
VDR-208ENST00000550325 LTBQ06643 244 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 RAB33AQ14088 237 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 LDLRAD1Q5T700 205 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 OR56A1Q8NGH5 318 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 RELTQ969Z4 430 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 CNTNAP3BQ96NU0 1288 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 ZNF334Q9HCZ1 680 aaPredicted RBP11.14□□□□□ -0.63
VDR-208ENST00000550325 CMC2Q9NRP2 79 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 CLDND1Q9NY35 253 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 ZNF443Q9Y2A4 671 aaPredicted RBP11.14□□□□□ -0.63
VDR-208ENST00000550325 SLC35A3Q9Y2D2 325 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 ZNF337Q9Y3M9 751 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 SCN8AQ9UQD0 1980 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 RFPL4AA6NLU0 287 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 RFPL4AL1F8VTS6 287 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 CACNB4O00305 520 aaPredicted RBP11.14□□□□□ -0.63
VDR-208ENST00000550325 LATS1O95835 1130 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 HOXB1P14653 301 aaPredicted RBP11.14□□□□□ -0.63
VDR-208ENST00000550325 ITGB8P26012 769 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 CERS1P27544 350 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 ACTC1P68032 377 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 ACTA1P68133 377 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 ELAVL2Q12926 359 aaKnown RBP11.14□□□□□ -0.63
VDR-208ENST00000550325 ZNF528Q3MIS6 628 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 AMZ1Q400G9 498 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 MORN1Q5T089 497 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 OLFML2AQ68BL7 652 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 PWWP2BQ6NUJ5 590 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 WDR88Q6ZMY6 472 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 OVCH1Q7RTY7 1134 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 NAA40Q86UY6 237 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 EIF4E3Q8N5X7 224 aaKnown RBP11.14□□□□□ -0.63
VDR-208ENST00000550325 LMF1Q96S06 567 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 RNF208Q9H0X6 261 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 RHBGQ9H310 441 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 ZFP57Q9NU63 452 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 MED31Q9Y3C7 131 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 ZNF780BQ9Y6R6 833 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 BHLHE40O14503 412 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 PCDH8O95206 1070 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 RPA2P15927 270 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 VAMP1P23763 118 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 RIPPLY1Q0D2K3 151 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 TEAD2Q15562 447 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 PLEKHN1Q494U1 663 aaPredicted RBP11.14□□□□□ -0.63
VDR-208ENST00000550325 ZNF793Q6ZN11 406 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 FAM122BQ7Z309 247 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 OR2A12Q8NGT7 310 aa11.14□□□□□ -0.63
VDR-208ENST00000550325 CNN2Q99439 309 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms