RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 BGLAPP02818 100 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 UMPSP11172 480 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 NQO1P15559 274 aaKnown RBP8.54□□□□□ -1.04
RAB5B-205ENST00000549034 ITGA2P17301 1181 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 RHCEP18577 417 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 ATP6V1B2P21281 511 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 GRPRP30550 384 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 AGTR1P30556 359 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 ASCL1P50553 236 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 TRAP1Q12931 704 aaKnown RBP8.54□□□□□ -1.04
RAB5B-205ENST00000549034 PMS2P3Q13401 168 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 SNTB1Q13884 538 aaKnown RBP8.54□□□□□ -1.04
RAB5B-205ENST00000549034 MFSD13AQ14CX5 517 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 TRAM2Q15035 370 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 PDK3Q15120 406 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 GUSBP1Q15486 140 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 EXOC3L2Q2M3D2 409 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 HIST2H2BCQ6DN03 193 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 PGM2L1Q6PCE3 622 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 H1FNTQ75WM6 255 aaPredicted RBP8.54□□□□□ -1.04
RAB5B-205ENST00000549034 RRM2BQ7LG56 351 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 TSEN54Q7Z6J9 526 aaKnown RBP8.54□□□□□ -1.04
RAB5B-205ENST00000549034 GALNT5Q7Z7M9 940 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 ZNF100Q8IYN0 542 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 OR6K3Q8NGY3 331 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 OR6S1Q8NH40 331 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 TMEM239Q8WW34 195 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 CCDC124Q96CT7 223 aaKnown RBP8.54□□□□□ -1.04
RAB5B-205ENST00000549034 ASB9Q96DX5 294 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 C7orf34Q96L11 122 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 TACO1Q9BSH4 297 aaKnown RBP8.54□□□□□ -1.04
RAB5B-205ENST00000549034 ASPNQ9BXN1 380 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 BCO1Q9HAY6 547 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 GP6Q9HCN6 339 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 JKAMPQ9P055 326 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 ING1Q9UK53 422 aaPredicted RBP8.54□□□□□ -1.04
RAB5B-205ENST00000549034 NOSIPQ9Y314 301 aaKnown RBP8.54□□□□□ -1.04
RAB5B-205ENST00000549034 MED31Q9Y3C7 131 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 SPTBN1Q01082 2364 aaKnown RBP8.54□□□□□ -1.04
RAB5B-205ENST00000549034 FREM1Q5H8C1 2179 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 ZNF716A6NP11 495 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 MS4A18H0YCH9 400 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 M0R082 166 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 ACOT8O14734 319 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 MRPL33O75394 65 aaKnown RBP8.53□□□□□ -1.04
RAB5B-205ENST00000549034 VAMP5O95183 116 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 OR6A2O95222 327 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 MT-ND1P03886 318 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 FABP3P05413 133 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 CD8BP10966 210 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 FUT1P19526 365 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 FUT4P22083 530 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 AHCYP23526 432 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 RBM34P42696 430 aaKnown RBP8.53□□□□□ -1.04
RAB5B-205ENST00000549034 UGT2B15P54855 530 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 VLDLRP98155 873 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 CHRNB3Q05901 458 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 FAM27E3Q08E93 113 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 C1DQ13901 141 aaKnown RBP8.53□□□□□ -1.04
RAB5B-205ENST00000549034 SLC17A1Q14916 467 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 MS4A18Q3C1V0 323 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 MTX3Q5HYI7 312 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 LCN8Q6JVE9 175 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 ZNF474Q6S9Z5 364 aaPredicted RBP8.53□□□□□ -1.04
RAB5B-205ENST00000549034 TBPL2Q6SJ96 375 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 ZNF730Q6ZMV8 503 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.53□□□□□ -1.04
RAB5B-205ENST00000549034 STK32CQ86UX6 486 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 ZDHHC21Q8IVQ6 265 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 CDK20Q8IZL9 346 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 LRRC17Q8N6Y2 441 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 OR52J3Q8NH60 311 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 PFN4Q8NHR9 129 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 ZNF417Q8TAU3 575 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 RNASE6Q93091 150 aaKnown RBP8.53□□□□□ -1.04
RAB5B-205ENST00000549034 SGTBQ96EQ0 304 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 OXGR1Q96P68 337 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 MOGAT1Q96PD6 335 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 ZNF587Q96SQ5 575 aaPredicted RBP8.53□□□□□ -1.04
RAB5B-205ENST00000549034 SF3B5Q9BWJ5 86 aaKnown RBP8.53□□□□□ -1.04
RAB5B-205ENST00000549034 SLC19A3Q9BZV2 496 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 TRIM15Q9C019 465 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 KLHL4Q9C0H6 718 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 NMNAT1Q9HAN9 279 aaPredicted RBP8.53□□□□□ -1.04
RAB5B-205ENST00000549034 NANSQ9NR45 359 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 PARPBPQ9NWS1 579 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 ELOVL5Q9NYP7 299 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 NDUFAF4Q9P032 175 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 EMC3Q9P0I2 261 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 SEC14L4Q9UDX3 406 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 FOXD3Q9UJU5 478 aaPredicted RBP8.53□□□□□ -1.04
RAB5B-205ENST00000549034 RASD1Q9Y272 281 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 B3GALT5Q9Y2C3 310 aa8.53□□□□□ -1.04
RAB5B-205ENST00000549034 IGKV3D-15A0A087WSY6 115 aa8.52□□□□□ -1.05
RAB5B-205ENST00000549034 TCRBV5S2A0A599 114 aa8.52□□□□□ -1.05
RAB5B-205ENST00000549034 C11orf98E9PRG8 122 aa8.52□□□□□ -1.05
RAB5B-205ENST00000549034 BLOC1S5-TXNDC5H3BN57 136 aa8.52□□□□□ -1.05
RAB5B-205ENST00000549034 PLPP3O14495 311 aa8.52□□□□□ -1.05
RAB5B-205ENST00000549034 OR7A10O76100 309 aa8.52□□□□□ -1.05
RAB5B-205ENST00000549034 MT-ATP6P00846 226 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms