RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 ATP23Q9Y6H3 246 aa15.2■□□□□ 0.02
CHMP1A-205ENST00000548650 FBN3Q75N90 2809 aa15.2■□□□□ 0.02
CHMP1A-205ENST00000548650 CUBNO60494 3623 aa15.19■□□□□ 0.02
CHMP1A-205ENST00000548650 ELOA3DA6NLF2 546 aaPredicted RBP15.19■□□□□ 0.02
CHMP1A-205ENST00000548650 GPRIN2O60269 458 aa15.19■□□□□ 0.02
CHMP1A-205ENST00000548650 FZD7O75084 574 aa15.19■□□□□ 0.02
CHMP1A-205ENST00000548650 VAMP5O95183 116 aa15.19■□□□□ 0.02
CHMP1A-205ENST00000548650 WNT11O96014 354 aa15.19■□□□□ 0.02
CHMP1A-205ENST00000548650 CDH2P19022 906 aaPredicted RBP15.19■□□□□ 0.02
CHMP1A-205ENST00000548650 HOXC5Q00444 222 aa15.19■□□□□ 0.02
CHMP1A-205ENST00000548650 FADDQ13158 208 aa15.19■□□□□ 0.02
CHMP1A-205ENST00000548650 RGNQ15493 299 aa15.19■□□□□ 0.02
CHMP1A-205ENST00000548650 ELOA3BQ3SY89 546 aa15.19■□□□□ 0.02
CHMP1A-205ENST00000548650 TBRG1Q3YBR2 411 aa15.19■□□□□ 0.02
CHMP1A-205ENST00000548650 PRAMEF8Q5VWM4 474 aa15.19■□□□□ 0.02
CHMP1A-205ENST00000548650 PRAMEF7Q5VXH5 474 aa15.19■□□□□ 0.02
CHMP1A-205ENST00000548650 CREB3L2Q70SY1 520 aa15.19■□□□□ 0.02
CHMP1A-205ENST00000548650 LINGO2Q7L985 606 aa15.19■□□□□ 0.02
CHMP1A-205ENST00000548650 CXXC5Q7LFL8 322 aaKnown RBP15.19■□□□□ 0.02
CHMP1A-205ENST00000548650 ABHD12BQ7Z5M8 362 aaPredicted RBP15.19■□□□□ 0.02
CHMP1A-205ENST00000548650 EPHX4Q8IUS5 362 aa15.19■□□□□ 0.02
CHMP1A-205ENST00000548650 ELOA3Q8NG57 546 aa15.19■□□□□ 0.02
CHMP1A-205ENST00000548650 OR1K1Q8NGR3 316 aa15.19■□□□□ 0.02
CHMP1A-205ENST00000548650 STK35Q8TDR2 534 aa15.19■□□□□ 0.02
CHMP1A-205ENST00000548650 SLC35B4Q969S0 331 aa15.19■□□□□ 0.02
CHMP1A-205ENST00000548650 RSPO3Q9BXY4 272 aaPredicted RBP15.19■□□□□ 0.02
CHMP1A-205ENST00000548650 TMBIM4Q9HC24 238 aa15.19■□□□□ 0.02
CHMP1A-205ENST00000548650 OBP2BQ9NPH6 170 aa15.19■□□□□ 0.02
CHMP1A-205ENST00000548650 YAE1D1Q9NRH1 226 aa15.19■□□□□ 0.02
CHMP1A-205ENST00000548650 IFT52Q9Y366 437 aa15.19■□□□□ 0.02
CHMP1A-205ENST00000548650 USH1CQ9Y6N9 552 aa15.19■□□□□ 0.02
CHMP1A-205ENST00000548650 IGHV1-18A0A0C4DH31 117 aa15.18■□□□□ 0.02
CHMP1A-205ENST00000548650 TMEM247A6NEH6 219 aa15.18■□□□□ 0.02
CHMP1A-205ENST00000548650 ZNF587BE7ETH6 402 aa15.18■□□□□ 0.02
CHMP1A-205ENST00000548650 AHSA1O95433 338 aa15.18■□□□□ 0.02
CHMP1A-205ENST00000548650 LGI1O95970 557 aa15.18■□□□□ 0.02
CHMP1A-205ENST00000548650 PNMTP11086 282 aa15.18■□□□□ 0.02
CHMP1A-205ENST00000548650 MRPL19P49406 292 aaKnown RBP15.18■□□□□ 0.02
CHMP1A-205ENST00000548650 DSCR9P59020 149 aa15.18■□□□□ 0.02
CHMP1A-205ENST00000548650 EGR4Q05215 589 aa15.18■□□□□ 0.02
CHMP1A-205ENST00000548650 RAB35Q15286 201 aa15.18■□□□□ 0.02
CHMP1A-205ENST00000548650 TMEM249Q2WGJ8 235 aa15.18■□□□□ 0.02
CHMP1A-205ENST00000548650 ZNF311Q5JNZ3 666 aa15.18■□□□□ 0.02
CHMP1A-205ENST00000548650 C6orf52Q5T4I8 152 aa15.18■□□□□ 0.02
CHMP1A-205ENST00000548650 TMEM225Q6GV28 225 aa15.18■□□□□ 0.02
CHMP1A-205ENST00000548650 EPGNQ6UW88 154 aa15.18■□□□□ 0.02
CHMP1A-205ENST00000548650 C6orf89Q6UWU4 347 aa15.18■□□□□ 0.02
CHMP1A-205ENST00000548650 HIPK1Q86Z02 1210 aa15.18■□□□□ 0.02
CHMP1A-205ENST00000548650 MSRB3Q8IXL7 192 aa15.18■□□□□ 0.02
CHMP1A-205ENST00000548650 MFSD8Q8NHS3 518 aa15.18■□□□□ 0.02
CHMP1A-205ENST00000548650 BBS10Q8TAM1 723 aa15.18■□□□□ 0.02
CHMP1A-205ENST00000548650 NELFAQ9H3P2 528 aa15.18■□□□□ 0.02
CHMP1A-205ENST00000548650 ARMC7Q9H6L4 198 aa15.18■□□□□ 0.02
CHMP1A-205ENST00000548650 CACYBPQ9HB71 228 aaKnown RBP15.18■□□□□ 0.02
CHMP1A-205ENST00000548650 SLC25A37Q9NYZ2 338 aa15.18■□□□□ 0.02
CHMP1A-205ENST00000548650 SEC14L4Q9UDX3 406 aa15.18■□□□□ 0.02
CHMP1A-205ENST00000548650 ZNF232Q9UNY5 417 aa15.18■□□□□ 0.02
CHMP1A-205ENST00000548650 MOKQ9UQ07 419 aa15.18■□□□□ 0.02
CHMP1A-205ENST00000548650 RASD1Q9Y272 281 aa15.18■□□□□ 0.02
CHMP1A-205ENST00000548650 CLIC1O00299 241 aa15.17■□□□□ 0.02
CHMP1A-205ENST00000548650 UPK3AO75631 287 aa15.17■□□□□ 0.02
CHMP1A-205ENST00000548650 APOBEC3AP31941 199 aaPredicted RBP15.17■□□□□ 0.02
CHMP1A-205ENST00000548650 LOXL1Q08397 574 aaPredicted RBP15.17■□□□□ 0.02
CHMP1A-205ENST00000548650 NIPAL3Q6P499 406 aa15.17■□□□□ 0.02
CHMP1A-205ENST00000548650 COMTD1Q86VU5 262 aa15.17■□□□□ 0.02
CHMP1A-205ENST00000548650 C10orf111Q8N326 155 aa15.17■□□□□ 0.02
CHMP1A-205ENST00000548650 KTI12Q96EK9 354 aaPredicted RBP15.17■□□□□ 0.02
CHMP1A-205ENST00000548650 C7orf26Q96N11 449 aa15.17■□□□□ 0.02
CHMP1A-205ENST00000548650 SLC38A2Q96QD8 506 aa15.17■□□□□ 0.02
CHMP1A-205ENST00000548650 RAD21L1Q9H4I0 556 aa15.17■□□□□ 0.02
CHMP1A-205ENST00000548650 TMEM45AQ9NWC5 275 aa15.17■□□□□ 0.02
CHMP1A-205ENST00000548650 B3GAT1Q9P2W7 334 aa15.17■□□□□ 0.02
CHMP1A-205ENST00000548650 ARPC4-TTLL3A0A0A6YYG9 625 aa15.16■□□□□ 0.02
CHMP1A-205ENST00000548650 OR6C65A6NJZ3 312 aa15.16■□□□□ 0.02
CHMP1A-205ENST00000548650 A8MV72 311 aaPredicted RBP15.16■□□□□ 0.02
CHMP1A-205ENST00000548650 KRT33AO76009 404 aa15.16■□□□□ 0.02
CHMP1A-205ENST00000548650 LY6HO94772 140 aa15.16■□□□□ 0.02
CHMP1A-205ENST00000548650 ARAFP10398 606 aa15.16■□□□□ 0.02
CHMP1A-205ENST00000548650 SLC25A16P16260 332 aa15.16■□□□□ 0.02
CHMP1A-205ENST00000548650 HTR2AP28223 471 aa15.16■□□□□ 0.02
CHMP1A-205ENST00000548650 RPS5P46782 204 aaKnown RBP15.16■□□□□ 0.02
CHMP1A-205ENST00000548650 EFNA4P52798 201 aa15.16■□□□□ 0.02
CHMP1A-205ENST00000548650 VLDLRP98155 873 aa15.16■□□□□ 0.02
CHMP1A-205ENST00000548650 CHRNB3Q05901 458 aa15.16■□□□□ 0.02
CHMP1A-205ENST00000548650 SWI5Q1ZZU3 235 aa15.16■□□□□ 0.02
CHMP1A-205ENST00000548650 MST1LQ2TV78 715 aa15.16■□□□□ 0.02
CHMP1A-205ENST00000548650 BEND6Q5SZJ8 279 aaPredicted RBP15.16■□□□□ 0.02
CHMP1A-205ENST00000548650 LRIF1Q5T3J3 769 aa15.16■□□□□ 0.02
CHMP1A-205ENST00000548650 FUNDC1Q8IVP5 155 aa15.16■□□□□ 0.02
CHMP1A-205ENST00000548650 GOLGA6L1Q8N7Z2 621 aa15.16■□□□□ 0.02
CHMP1A-205ENST00000548650 C10orf105Q8TEF2 133 aa15.16■□□□□ 0.02
CHMP1A-205ENST00000548650 NANOS1Q8WY41 292 aaKnown RBP15.16■□□□□ 0.02
CHMP1A-205ENST00000548650 FAM168AQ92567 244 aa15.16■□□□□ 0.02
CHMP1A-205ENST00000548650 BCL2L2Q92843 193 aaPredicted RBP15.16■□□□□ 0.02
CHMP1A-205ENST00000548650 TNFRSF13CQ96RJ3 184 aa15.16■□□□□ 0.02
CHMP1A-205ENST00000548650 LINC00470Q9BZP3 86 aa15.16■□□□□ 0.02
CHMP1A-205ENST00000548650 TCF7L2Q9NQB0 619 aa15.16■□□□□ 0.02
CHMP1A-205ENST00000548650 CRNNQ9UBG3 495 aaPredicted RBP15.16■□□□□ 0.02
CHMP1A-205ENST00000548650 RCE1Q9Y256 329 aa15.16■□□□□ 0.02
CHMP1A-205ENST00000548650 MALRD1Q5VYJ5 2156 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms