RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 RNF130Q86XS8 419 aa17.36■□□□□ 0.37
GATC-202ENST00000548171 TRIML2Q8N7C3 387 aa17.36■□□□□ 0.37
GATC-202ENST00000548171 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.36■□□□□ 0.37
GATC-202ENST00000548171 KIF18AQ8NI77 898 aa17.36■□□□□ 0.37
GATC-202ENST00000548171 SNX18Q96RF0 628 aa17.36■□□□□ 0.37
GATC-202ENST00000548171 DOK1Q99704 481 aa17.36■□□□□ 0.37
GATC-202ENST00000548171 PLA2G12AQ9BZM1 189 aa17.36■□□□□ 0.37
GATC-202ENST00000548171 AKTIPQ9H8T0 292 aa17.36■□□□□ 0.37
GATC-202ENST00000548171 ADPRHL2Q9NX46 363 aa17.36■□□□□ 0.37
GATC-202ENST00000548171 A0A096LPE4 126 aa17.35■□□□□ 0.37
GATC-202ENST00000548171 A0A096LPI6 279 aa17.35■□□□□ 0.37
GATC-202ENST00000548171 A0A1W2PPZ6 126 aa17.35■□□□□ 0.37
GATC-202ENST00000548171 A8MVM7 634 aa17.35■□□□□ 0.37
GATC-202ENST00000548171 NR5A2O00482 541 aa17.35■□□□□ 0.37
GATC-202ENST00000548171 BPGMP07738 259 aa17.35■□□□□ 0.37
GATC-202ENST00000548171 THBS4P35443 961 aa17.35■□□□□ 0.37
GATC-202ENST00000548171 P2RY4P51582 365 aa17.35■□□□□ 0.37
GATC-202ENST00000548171 HGFACQ04756 655 aa17.35■□□□□ 0.37
GATC-202ENST00000548171 LGALS3BPQ08380 585 aa17.35■□□□□ 0.37
GATC-202ENST00000548171 RIN1Q13671 783 aa17.35■□□□□ 0.37
GATC-202ENST00000548171 SPATA21Q7Z572 469 aa17.35■□□□□ 0.37
GATC-202ENST00000548171 SVOPLQ8N434 492 aa17.35■□□□□ 0.37
GATC-202ENST00000548171 UBASH3BQ8TF42 649 aa17.35■□□□□ 0.37
GATC-202ENST00000548171 CCDC115Q96NT0 180 aa17.35■□□□□ 0.37
GATC-202ENST00000548171 DYNLRB1Q9NP97 96 aa17.35■□□□□ 0.37
GATC-202ENST00000548171 BTNL2Q9UIR0 455 aa17.35■□□□□ 0.37
GATC-202ENST00000548171 RASD1Q9Y272 281 aa17.35■□□□□ 0.37
GATC-202ENST00000548171 TENM1Q9UKZ4 2725 aa17.35■□□□□ 0.37
GATC-202ENST00000548171 CDHR4A6H8M9 788 aa17.34■□□□□ 0.37
GATC-202ENST00000548171 SPAG7O75391 227 aa17.34■□□□□ 0.37
GATC-202ENST00000548171 CHRM4P08173 479 aa17.34■□□□□ 0.37
GATC-202ENST00000548171 IFNGR1P15260 489 aa17.34■□□□□ 0.37
GATC-202ENST00000548171 CBR1P16152 277 aa17.34■□□□□ 0.37
GATC-202ENST00000548171 COPZ1P61923 177 aa17.34■□□□□ 0.37
GATC-202ENST00000548171 TUBA1BP68363 451 aa17.34■□□□□ 0.37
GATC-202ENST00000548171 TUBA4AP68366 448 aa17.34■□□□□ 0.37
GATC-202ENST00000548171 POU3F1Q03052 451 aaPredicted RBP17.34■□□□□ 0.37
GATC-202ENST00000548171 SCGB2A2Q13296 93 aa17.34■□□□□ 0.37
GATC-202ENST00000548171 PDCD2Q16342 344 aaPredicted RBP17.34■□□□□ 0.37
GATC-202ENST00000548171 SPANXN4Q5MJ08 99 aa17.34■□□□□ 0.37
GATC-202ENST00000548171 PRAMEF8Q5VWM4 474 aa17.34■□□□□ 0.37
GATC-202ENST00000548171 PRAMEF7Q5VXH5 474 aa17.34■□□□□ 0.37
GATC-202ENST00000548171 WBP2NLQ6ICG8 309 aa17.34■□□□□ 0.37
GATC-202ENST00000548171 NIPAL3Q6P499 406 aa17.34■□□□□ 0.37
GATC-202ENST00000548171 DEF8Q6ZN54 512 aa17.34■□□□□ 0.37
GATC-202ENST00000548171 TUBA1AQ71U36 451 aa17.34■□□□□ 0.37
GATC-202ENST00000548171 LINGO2Q7L985 606 aa17.34■□□□□ 0.37
GATC-202ENST00000548171 EPHX4Q8IUS5 362 aa17.34■□□□□ 0.37
GATC-202ENST00000548171 PEX5LQ8IYB4 626 aa17.34■□□□□ 0.37
GATC-202ENST00000548171 IL17RDQ8NFM7 739 aa17.34■□□□□ 0.37
GATC-202ENST00000548171 NELFAQ9H3P2 528 aa17.34■□□□□ 0.37
GATC-202ENST00000548171 SEC61A2Q9H9S3 476 aa17.34■□□□□ 0.37
GATC-202ENST00000548171 B4DSR2 109 aa17.33■□□□□ 0.36
GATC-202ENST00000548171 E9PBE3 544 aa17.33■□□□□ 0.36
GATC-202ENST00000548171 RPL36A-HNRNPH2H7BZ11 118 aa17.33■□□□□ 0.36
GATC-202ENST00000548171 FRS3O43559 492 aa17.33■□□□□ 0.36
GATC-202ENST00000548171 SPRY1O43609 319 aaPredicted RBP17.33■□□□□ 0.36
GATC-202ENST00000548171 UPK3AO75631 287 aa17.33■□□□□ 0.36
GATC-202ENST00000548171 TFPTP0C1Z6 253 aa17.33■□□□□ 0.36
GATC-202ENST00000548171 NR2F1P10589 423 aa17.33■□□□□ 0.36
GATC-202ENST00000548171 S100A3P33764 101 aa17.33■□□□□ 0.36
GATC-202ENST00000548171 ARR3P36575 388 aa17.33■□□□□ 0.36
GATC-202ENST00000548171 ROR2Q01974 943 aaKnown RBP17.33■□□□□ 0.36
GATC-202ENST00000548171 ADRM1Q16186 407 aa17.33■□□□□ 0.36
GATC-202ENST00000548171 C1orf140Q5VVS0 124 aa17.33■□□□□ 0.36
GATC-202ENST00000548171 RINLQ6ZS11 566 aa17.33■□□□□ 0.36
GATC-202ENST00000548171 LRRC34Q8IZ02 419 aa17.33■□□□□ 0.36
GATC-202ENST00000548171 ZCCHC24Q8N2G6 241 aaKnown RBP17.33■□□□□ 0.36
GATC-202ENST00000548171 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.33■□□□□ 0.36
GATC-202ENST00000548171 OCEL1Q9H607 264 aa17.33■□□□□ 0.36
GATC-202ENST00000548171 LGALS13Q9UHV8 139 aa17.33■□□□□ 0.36
GATC-202ENST00000548171 RCE1Q9Y256 329 aa17.33■□□□□ 0.36
GATC-202ENST00000548171 CCDC154A6NI56 674 aa17.32■□□□□ 0.36
GATC-202ENST00000548171 MYZAPP0CAP1 466 aa17.32■□□□□ 0.36
GATC-202ENST00000548171 LRRC74AQ0VAA2 488 aa17.32■□□□□ 0.36
GATC-202ENST00000548171 BNIP2Q12982 314 aa17.32■□□□□ 0.36
GATC-202ENST00000548171 FAM174BQ3ZCQ3 159 aa17.32■□□□□ 0.36
GATC-202ENST00000548171 GLCCI1Q86VQ1 547 aa17.32■□□□□ 0.36
GATC-202ENST00000548171 CCDC36Q8IYA8 594 aa17.32■□□□□ 0.36
GATC-202ENST00000548171 CADM2Q8N3J6 435 aa17.32■□□□□ 0.36
GATC-202ENST00000548171 CKAP2Q8WWK9 683 aa17.32■□□□□ 0.36
GATC-202ENST00000548171 ZMYND19Q96E35 227 aaPredicted RBP17.32■□□□□ 0.36
GATC-202ENST00000548171 PPP1R36Q96LQ0 422 aa17.32■□□□□ 0.36
GATC-202ENST00000548171 PANX1Q96RD7 426 aa17.32■□□□□ 0.36
GATC-202ENST00000548171 IGHV2OR16-5A0A0B4J2B6 119 aa17.31■□□□□ 0.36
GATC-202ENST00000548171 TMEM129A0AVI4 362 aa17.31■□□□□ 0.36
GATC-202ENST00000548171 WIPF1O43516 503 aa17.31■□□□□ 0.36
GATC-202ENST00000548171 NPIPB7O75200 414 aa17.31■□□□□ 0.36
GATC-202ENST00000548171 ACAA2P42765 397 aaKnown RBP17.31■□□□□ 0.36
GATC-202ENST00000548171 ARF1P84077 181 aaKnown RBP17.31■□□□□ 0.36
GATC-202ENST00000548171 TRIP10Q15642 601 aa17.31■□□□□ 0.36
GATC-202ENST00000548171 LSRQ86X29 649 aaPredicted RBP17.31■□□□□ 0.36
GATC-202ENST00000548171 RLIMQ9NVW2 624 aa17.31■□□□□ 0.36
GATC-202ENST00000548171 SH3PXD2BA1X283 911 aa17.3■□□□□ 0.36
GATC-202ENST00000548171 TMEM229AB2RXF0 380 aa17.3■□□□□ 0.36
GATC-202ENST00000548171 SLC43A1O75387 559 aa17.3■□□□□ 0.36
GATC-202ENST00000548171 ZNF432O94892 652 aa17.3■□□□□ 0.36
GATC-202ENST00000548171 C1QCP02747 245 aa17.3■□□□□ 0.36
GATC-202ENST00000548171 CELA3BP08861 270 aa17.3■□□□□ 0.36
GATC-202ENST00000548171 ADRA2AP08913 450 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms