RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 USF1P22415 310 aaPredicted RBP3.63□□□□□ -1.83
CBX5-203ENST00000547872 IMPA1P29218 277 aa3.63□□□□□ -1.83
CBX5-203ENST00000547872 MARCKSL1P49006 195 aa3.63□□□□□ -1.83
CBX5-203ENST00000547872 CDK9P50750 372 aaKnown RBP3.63□□□□□ -1.83
CBX5-203ENST00000547872 TPD52P55327 224 aaPredicted RBP3.63□□□□□ -1.83
CBX5-203ENST00000547872 SNRPEP62304 92 aaKnown RBP3.63□□□□□ -1.83
CBX5-203ENST00000547872 SKP1P63208 163 aa3.63□□□□□ -1.83
CBX5-203ENST00000547872 CRADDP78560 199 aa3.63□□□□□ -1.83
CBX5-203ENST00000547872 CDH17Q12864 832 aa3.63□□□□□ -1.83
CBX5-203ENST00000547872 MSLNQ13421 630 aaPredicted RBP3.63□□□□□ -1.83
CBX5-203ENST00000547872 IRF3Q14653 427 aa3.63□□□□□ -1.83
CBX5-203ENST00000547872 CTU2Q2VPK5 515 aaKnown RBP3.63□□□□□ -1.83
CBX5-203ENST00000547872 PGGHGQ32M88 737 aa3.63□□□□□ -1.83
CBX5-203ENST00000547872 CTSL3PQ5NE16 218 aa3.63□□□□□ -1.83
CBX5-203ENST00000547872 SHQ1Q6PI26 577 aaKnown RBP3.63□□□□□ -1.83
CBX5-203ENST00000547872 CES3Q6UWW8 571 aa3.63□□□□□ -1.83
CBX5-203ENST00000547872 TMPRSS11BQ86T26 416 aa3.63□□□□□ -1.83
CBX5-203ENST00000547872 IFNEQ86WN2 208 aa3.63□□□□□ -1.83
CBX5-203ENST00000547872 C9orf40Q8IXQ3 194 aa3.63□□□□□ -1.83
CBX5-203ENST00000547872 C17orf53Q8N3J3 647 aaPredicted RBP3.63□□□□□ -1.83
CBX5-203ENST00000547872 SVOPLQ8N434 492 aa3.63□□□□□ -1.83
CBX5-203ENST00000547872 MFSD9Q8NBP5 474 aa3.63□□□□□ -1.83
CBX5-203ENST00000547872 OR5M1Q8NGP8 315 aa3.63□□□□□ -1.83
CBX5-203ENST00000547872 OR13J1Q8NGT2 312 aa3.63□□□□□ -1.83
CBX5-203ENST00000547872 KCTD4Q8WVF5 259 aa3.63□□□□□ -1.83
CBX5-203ENST00000547872 CTNNBL1Q8WYA6 563 aaPredicted RBP3.63□□□□□ -1.83
CBX5-203ENST00000547872 PPWD1Q96BP3 646 aaKnown RBP3.63□□□□□ -1.83
CBX5-203ENST00000547872 STARD4Q96DR4 205 aa3.63□□□□□ -1.83
CBX5-203ENST00000547872 FAM120BQ96EK7 910 aaKnown RBP3.63□□□□□ -1.83
CBX5-203ENST00000547872 SFXN2Q96NB2 322 aa3.63□□□□□ -1.83
CBX5-203ENST00000547872 NAP1L3Q99457 506 aaPredicted RBP3.63□□□□□ -1.83
CBX5-203ENST00000547872 PINK1Q9BXM7 581 aa3.63□□□□□ -1.83
CBX5-203ENST00000547872 NARFLQ9H6Q4 476 aa3.63□□□□□ -1.83
CBX5-203ENST00000547872 METTL7AQ9H8H3 244 aa3.63□□□□□ -1.83
CBX5-203ENST00000547872 COPS7BQ9H9Q2 264 aaPredicted RBP3.63□□□□□ -1.83
CBX5-203ENST00000547872 CALHM2Q9HA72 323 aa3.63□□□□□ -1.83
CBX5-203ENST00000547872 PROK2Q9HC23 129 aa3.63□□□□□ -1.83
CBX5-203ENST00000547872 ACKR4Q9NPB9 350 aa3.63□□□□□ -1.83
CBX5-203ENST00000547872 KLRF1Q9NZS2 232 aa3.63□□□□□ -1.83
CBX5-203ENST00000547872 MDFICQ9P1T7 246 aa3.63□□□□□ -1.83
CBX5-203ENST00000547872 CLCF1Q9UBD9 225 aa3.63□□□□□ -1.83
CBX5-203ENST00000547872 DKKL1Q9UK85 242 aa3.63□□□□□ -1.83
CBX5-203ENST00000547872 C15orf41Q9Y2V0 281 aa3.63□□□□□ -1.83
CBX5-203ENST00000547872 SONP18583 2426 aaKnown RBP3.63□□□□□ -1.83
CBX5-203ENST00000547872 SEC16AO15027 2179 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 IGHV4-61A0A0C4DH41 118 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 CCT8L1PA6NM43 557 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 C17orf51A8MQB3 221 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 H7C0S8 307 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 ERI3O43414 337 aaKnown RBP3.62□□□□□ -1.83
CBX5-203ENST00000547872 TSPAN9O75954 239 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 RSL1D1O76021 490 aaKnown RBP3.62□□□□□ -1.83
CBX5-203ENST00000547872 GUCA1CO95843 209 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 GAS8O95995 478 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 INHBAP08476 426 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 ERGP11308 486 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 MMP9P14780 707 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 SLC25A16P16260 332 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 TBXA2RP21731 343 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 PTPN6P29350 595 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 IL2RGP31785 369 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 RPL22P35268 128 aaKnown RBP3.62□□□□□ -1.83
CBX5-203ENST00000547872 CDKN2BP42772 138 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 SLC15A1P46059 708 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 NR2C2P49116 596 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 MMP15P51511 669 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 PLA2G16P53816 162 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 LINC01547P58512 204 aaPredicted RBP3.62□□□□□ -1.83
CBX5-203ENST00000547872 EIF3EP60228 445 aaKnown RBP3.62□□□□□ -1.83
CBX5-203ENST00000547872 HERVK_113P63132 956 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 ERVK-8P63133 956 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 BSPH1Q075Z2 132 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 LGALS3BPQ08380 585 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 LOXL1Q08397 574 aaPredicted RBP3.62□□□□□ -1.83
CBX5-203ENST00000547872 GAGE2BQ13066 116 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 TFDP2Q14188 446 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 RAB35Q15286 201 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 ZNF791Q3KP31 576 aaPredicted RBP3.62□□□□□ -1.83
CBX5-203ENST00000547872 GAGE2EQ4V326 116 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 SLC35E4Q6ICL7 350 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 OR5M10Q6IEU7 315 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 GAGE2AQ6NT46 116 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 ALKBH5Q6P6C2 394 aaKnown RBP3.62□□□□□ -1.83
CBX5-203ENST00000547872 DGAT2L6Q6ZPD8 337 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 SH2D5Q6ZV89 423 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 BZW1Q7L1Q6 419 aaKnown RBP3.62□□□□□ -1.83
CBX5-203ENST00000547872 SZRD1Q7Z422 152 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 PTOV1Q86YD1 416 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 CDKL3Q8IVW4 592 aaPredicted RBP3.62□□□□□ -1.83
CBX5-203ENST00000547872 CPNE9Q8IYJ1 553 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 OR10V1Q8NGI7 309 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 OR5L2Q8NGL0 311 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 OR1J4Q8NGS1 313 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 PAQR8Q8TEZ7 354 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 C22orf15Q8WYQ4 148 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 DAZLQ92904 295 aaKnown RBP3.62□□□□□ -1.83
CBX5-203ENST00000547872 MRPL24Q96A35 216 aaKnown RBP3.62□□□□□ -1.83
CBX5-203ENST00000547872 S100PBPQ96BU1 408 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 C17orf77Q96MU5 243 aa3.62□□□□□ -1.83
CBX5-203ENST00000547872 DGAT2Q96PD7 388 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms