RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 MFSD6LQ8IWD5 586 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 FBXL16Q8N461 479 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 CSGALNACT2Q8N6G5 542 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 B3GNT7Q8NFL0 401 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 BEST4Q8NFU0 473 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 LILRB4Q8NHJ6 448 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 RHEBL1Q8TAI7 183 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 FNDC8Q8TC99 324 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 ARNTL2Q8WYA1 636 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 STMN2Q93045 179 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.5□□□□□ -1.85
SCAF11-210ENST00000547654 CERS2Q96G23 380 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 MSANTD3Q96H12 275 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 MBOAT4Q96T53 435 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 CNN2Q99439 309 aaKnown RBP3.5□□□□□ -1.85
SCAF11-210ENST00000547654 MRPL37Q9BZE1 423 aaKnown RBP3.5□□□□□ -1.85
SCAF11-210ENST00000547654 WDR13Q9H1Z4 485 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 ZNF385DQ9H6B1 395 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 C8orf33Q9H7E9 229 aaPredicted RBP3.5□□□□□ -1.85
SCAF11-210ENST00000547654 SYNDIG1Q9H7V2 258 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 PXMP2Q9NR77 195 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 PDE10AQ9Y233 779 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 NTNG1Q9Y2I2 539 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 AUP1Q9Y679 476 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 UNC80Q8N2C7 3258 aa3.5□□□□□ -1.85
SCAF11-210ENST00000547654 TOPAZ1Q8N9V7 1692 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 A0A1W2PPV4 95 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 HSBP1L1C9JCN9 74 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 E7ESA3 106 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 PSMD11O00231 422 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 CXCL13O43927 109 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 PRKYO43930 277 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 OR10H3O60404 316 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 STAMBPO95630 424 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 CLDN1O95832 211 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 IGHG4P01861 327 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 APOA1P02647 267 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 AMBPP02760 352 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 WNT2P09544 360 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 ZNF883P0CG24 379 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 TUBG1P23258 451 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 HSD17B2P37059 387 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 LEPP41159 167 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 ETV5P41161 510 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 MAGEA9P43362 315 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 HLCSP50747 726 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 DAP3P51398 398 aaKnown RBP3.49□□□□□ -1.85
SCAF11-210ENST00000547654 PRKXP51817 358 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 PKNOX1P55347 436 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 LINC01547P58512 204 aaPredicted RBP3.49□□□□□ -1.85
SCAF11-210ENST00000547654 ST3GAL3Q11203 375 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 ILKQ13418 452 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 CYP51A1Q16850 503 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 TMEM52BQ4KMG9 183 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 BEX5Q5H9J7 111 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 MS4A13Q5J8X5 152 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 MLIPQ5VWP3 458 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 STAC2Q6ZMT1 411 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 SLC16A14Q7RTX9 510 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 HPS6Q86YV9 775 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 KRTAP7-1Q8IUC3 87 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 NUDCD3Q8IVD9 361 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 MMAAQ8IVH4 418 aaKnown RBP3.49□□□□□ -1.85
SCAF11-210ENST00000547654 SYCE1Q8N0S2 351 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 NUP37Q8NFH4 326 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 PROKR2Q8NFJ6 384 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 OR4F6Q8NGB9 312 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 OR5T3Q8NGG3 340 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 OR4A4PQ8NGN8 299 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 GPR151Q8TDV0 419 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 ACMSDQ8TDX5 336 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 TCTEX1D2Q8WW35 142 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 KIFAP3Q92845 792 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 C11orf52Q96A22 123 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 ZNF707Q96C28 371 aaPredicted RBP3.49□□□□□ -1.85
SCAF11-210ENST00000547654 NTNG2Q96CW9 530 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 MOCOSQ96EN8 888 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 RNF2Q99496 336 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 P2RY13Q9BPV8 354 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 RIOK1Q9BRS2 568 aaKnown RBP3.49□□□□□ -1.85
SCAF11-210ENST00000547654 NAT10Q9H0A0 1025 aaKnown RBP3.49□□□□□ -1.85
SCAF11-210ENST00000547654 PPDPFQ9H3Y8 114 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 GLIPR2Q9H4G4 154 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 LYRM4Q9HD34 91 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 EXOSC3Q9NQT5 275 aaKnown RBP3.49□□□□□ -1.85
SCAF11-210ENST00000547654 TUBG2Q9NRH3 451 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 INPP5EQ9NRR6 644 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 PNO1Q9NRX1 252 aaKnown RBP3.49□□□□□ -1.85
SCAF11-210ENST00000547654 ABCC13Q9NSE7 274 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 CHMP5Q9NZZ3 219 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 PHF11Q9UIL8 331 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 RARRES3Q9UL19 164 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 RHBDD3Q9Y3P4 386 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 N6AMT1Q9Y5N5 214 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 QSER1Q2KHR3 1735 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 INSRP06213 1382 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 TMEM2Q9UHN6 1383 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 VIRMAQ69YN4 1812 aaKnown RBP3.49□□□□□ -1.85
SCAF11-210ENST00000547654 TUBGCP6Q96RT7 1819 aa3.49□□□□□ -1.85
SCAF11-210ENST00000547654 IGKV3D-15A0A087WSY6 115 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms