RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 ZNF687Q8N1G0 1237 aa11.6□□□□□ -0.55
SCAF11-209ENST00000547018 Q8N402 240 aa11.6□□□□□ -0.55
SCAF11-209ENST00000547018 METTL21AQ8WXB1 218 aa11.6□□□□□ -0.55
SCAF11-209ENST00000547018 TCEAL3Q969E4 200 aa11.6□□□□□ -0.55
SCAF11-209ENST00000547018 TAAR8Q969N4 342 aa11.6□□□□□ -0.55
SCAF11-209ENST00000547018 ADAD1Q96M93 576 aaKnown RBP11.6□□□□□ -0.55
SCAF11-209ENST00000547018 BEX1Q9HBH7 125 aa11.6□□□□□ -0.55
SCAF11-209ENST00000547018 B3GAT2Q9NPZ5 323 aa11.6□□□□□ -0.55
SCAF11-209ENST00000547018 EXTL2Q9UBQ6 330 aa11.6□□□□□ -0.55
SCAF11-209ENST00000547018 SF3B6Q9Y3B4 125 aaKnown RBP11.6□□□□□ -0.55
SCAF11-209ENST00000547018 LRP4O75096 1905 aa11.6□□□□□ -0.55
SCAF11-209ENST00000547018 A0A087WUJ7 227 aa11.6□□□□□ -0.55
SCAF11-209ENST00000547018 A0A1B0GX78 115 aa11.6□□□□□ -0.55
SCAF11-209ENST00000547018 IRGMA1A4Y4 181 aa11.6□□□□□ -0.55
SCAF11-209ENST00000547018 SAGE2PA6NJ88 616 aa11.6□□□□□ -0.55
SCAF11-209ENST00000547018 NUDT21O43809 227 aaKnown RBP11.6□□□□□ -0.55
SCAF11-209ENST00000547018 DDAH2O95865 285 aa11.6□□□□□ -0.55
SCAF11-209ENST00000547018 PSKH1P11801 424 aa11.6□□□□□ -0.55
SCAF11-209ENST00000547018 GLYR1Q49A26 553 aaPredicted RBP11.6□□□□□ -0.55
SCAF11-209ENST00000547018 PRAMEF20Q5VT98 475 aa11.6□□□□□ -0.55
SCAF11-209ENST00000547018 KISS1RQ969F8 398 aaPredicted RBP11.6□□□□□ -0.55
SCAF11-209ENST00000547018 LPAR4Q99677 370 aa11.6□□□□□ -0.55
SCAF11-209ENST00000547018 TSPAN10Q9H1Z9 355 aaPredicted RBP11.6□□□□□ -0.55
SCAF11-209ENST00000547018 BOD1L1Q8NFC6 3051 aa11.6□□□□□ -0.55
SCAF11-209ENST00000547018 A0A1W2PQM1 296 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 TAF4O00268 1085 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 SNRPBP14678 240 aaKnown RBP11.59□□□□□ -0.55
SCAF11-209ENST00000547018 MST1P26927 711 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 PPICP45877 212 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 FOXK1P85037 733 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 ZNF85Q03923 595 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 LTBQ06643 244 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 RPL18Q07020 188 aaKnown RBP11.59□□□□□ -0.55
SCAF11-209ENST00000547018 ETFDHQ16134 617 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 MEP1BQ16820 701 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 SLC6A19Q695T7 634 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 ARHGAP11AQ6P4F7 1023 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 NR2C2APQ86WQ0 139 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 SLC35F2Q8IXU6 374 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 PM20D2Q8IYS1 436 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 DNAJA4Q8WW22 397 aaPredicted RBP11.59□□□□□ -0.55
SCAF11-209ENST00000547018 JSRP1Q96MG2 331 aaPredicted RBP11.59□□□□□ -0.55
SCAF11-209ENST00000547018 OCIAD1Q9NX40 245 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 ANKRD10Q9NXR5 420 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 KLRF1Q9NZS2 232 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 ADAMTS9Q9P2N4 1935 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 EIF1AYO14602 144 aaKnown RBP11.59□□□□□ -0.55
SCAF11-209ENST00000547018 OR2B6P58173 313 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 EBPQ15125 230 aaKnown RBP11.59□□□□□ -0.55
SCAF11-209ENST00000547018 NKAIN1Q4KMZ8 207 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 HES5Q5TA89 166 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 WBP2NLQ6ICG8 309 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 TOR1AIP2Q8NFQ8 470 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 CNN2Q99439 309 aaKnown RBP11.59□□□□□ -0.55
SCAF11-209ENST00000547018 ZMIZ1Q9ULJ6 1067 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 IGKV1D-42A0A075B6H8 117 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 K7ESF4 209 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 ZNF24P17028 368 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 SPI1P17947 270 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 NUDT1P36639 197 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 STARD6P59095 220 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 TOMM20Q15388 145 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 ZNF181Q2M3W8 571 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 LCN10Q6JVE6 187 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 C19orf48Q6RUI8 117 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 YIPF7Q8N8F6 280 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 ABHD4Q8TB40 342 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 ENKURQ8TC29 256 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 ZNF721Q8TF20 911 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 SLC46A1Q96NT5 459 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 ALG12Q9BV10 488 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 WDR76Q9H967 626 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 MYEF2Q9P2K5 600 aaKnown RBP11.59□□□□□ -0.55
SCAF11-209ENST00000547018 RPH3AQ9Y2J0 694 aaPredicted RBP11.59□□□□□ -0.55
SCAF11-209ENST00000547018 V9GYH0 126 aa11.59□□□□□ -0.55
SCAF11-209ENST00000547018 A0A0G2JMP0 313 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 TRBV11-1A0A0K0K1C0 115 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 A0A0X1KG70 313 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 CCNKO75909 580 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 IL1AP01583 271 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 CELA2AP08217 269 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 GIMD1P0DJR0 217 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 IL11P20809 199 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 MYL9P24844 172 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 GDI2P50395 445 aaKnown RBP11.58□□□□□ -0.56
SCAF11-209ENST00000547018 ELAVL1Q15717 326 aaKnown RBP11.58□□□□□ -0.56
SCAF11-209ENST00000547018 ZNF141Q15928 474 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 KLHL26Q53HC5 615 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 DMRTC1Q5HYR2 192 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 VASNQ6EMK4 673 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 TUBA3EQ6PEY2 450 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 DNAAF1Q8NEP3 725 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 OR4M2Q8NGB6 313 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 THAP4Q8WY91 577 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 PPP1R14AQ96A00 147 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 TTYH2Q9BSA4 534 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 CRB3Q9BUF7 120 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 WWTR1Q9GZV5 400 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 SLC22A11Q9NSA0 550 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 NLKQ9UBE8 527 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms