RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 CYP4Z1Q86W10 505 aa12.86□□□□□ -0.35
DDX54-203ENST00000546869 DHFR2Q86XF0 187 aa12.86□□□□□ -0.35
DDX54-203ENST00000546869 NKAIN4Q8IVV8 208 aa12.86□□□□□ -0.35
DDX54-203ENST00000546869 DMRTC2Q8IXT2 367 aaPredicted RBP12.86□□□□□ -0.35
DDX54-203ENST00000546869 RNF113BQ8IZP6 322 aaKnown RBP12.86□□□□□ -0.35
DDX54-203ENST00000546869 ZNF610Q8N9Z0 462 aa12.86□□□□□ -0.35
DDX54-203ENST00000546869 LIPHQ8WWY8 451 aa12.86□□□□□ -0.35
DDX54-203ENST00000546869 TMEM45BQ96B21 275 aa12.86□□□□□ -0.35
DDX54-203ENST00000546869 SLC25A36Q96CQ1 311 aa12.86□□□□□ -0.35
DDX54-203ENST00000546869 ZNF300Q96RE9 604 aaPredicted RBP12.86□□□□□ -0.35
DDX54-203ENST00000546869 THTPAQ9BU02 230 aa12.86□□□□□ -0.35
DDX54-203ENST00000546869 FNDC11Q9BVV2 318 aa12.86□□□□□ -0.35
DDX54-203ENST00000546869 RBM24Q9BX46 236 aaKnown RBP12.86□□□□□ -0.35
DDX54-203ENST00000546869 KLHL4Q9C0H6 718 aa12.86□□□□□ -0.35
DDX54-203ENST00000546869 MMADHCQ9H3L0 296 aaPredicted RBP12.86□□□□□ -0.35
DDX54-203ENST00000546869 MRPL39Q9NYK5 338 aaKnown RBP12.86□□□□□ -0.35
DDX54-203ENST00000546869 NDUFAF4Q9P032 175 aa12.86□□□□□ -0.35
DDX54-203ENST00000546869 FLVCR1Q9Y5Y0 555 aa12.86□□□□□ -0.35
DDX54-203ENST00000546869 COL12A1Q99715 3063 aa12.86□□□□□ -0.35
DDX54-203ENST00000546869 ACOT8O14734 319 aa12.85□□□□□ -0.35
DDX54-203ENST00000546869 GSC2O15499 205 aa12.85□□□□□ -0.35
DDX54-203ENST00000546869 RAMP1O60894 148 aa12.85□□□□□ -0.35
DDX54-203ENST00000546869 SMNDC1O75940 238 aaKnown RBP eCLIP12.85□□□□□ -0.35
DDX54-203ENST00000546869 MT-ND1P03886 318 aa12.85□□□□□ -0.35
DDX54-203ENST00000546869 GTF2E2P29084 291 aaKnown RBP12.85□□□□□ -0.35
DDX54-203ENST00000546869 GRPRP30550 384 aa12.85□□□□□ -0.35
DDX54-203ENST00000546869 CD79BP40259 229 aa12.85□□□□□ -0.35
DDX54-203ENST00000546869 OR3A2P47893 321 aa12.85□□□□□ -0.35
DDX54-203ENST00000546869 TRAM2Q15035 370 aa12.85□□□□□ -0.35
DDX54-203ENST00000546869 ZNF74Q16587 644 aa12.85□□□□□ -0.35
DDX54-203ENST00000546869 TFAP2EQ6VUC0 442 aa12.85□□□□□ -0.35
DDX54-203ENST00000546869 PIWIL3Q7Z3Z3 882 aaKnown RBP12.85□□□□□ -0.35
DDX54-203ENST00000546869 NUFIP2Q7Z417 695 aaKnown RBP12.85□□□□□ -0.35
DDX54-203ENST00000546869 LUZP2Q86TE4 346 aa12.85□□□□□ -0.35
DDX54-203ENST00000546869 FAM86B1Q8N7N1 296 aa12.85□□□□□ -0.35
DDX54-203ENST00000546869 ZIC4Q8N9L1 334 aa12.85□□□□□ -0.35
DDX54-203ENST00000546869 PIK3C3Q8NEB9 887 aa12.85□□□□□ -0.35
DDX54-203ENST00000546869 TMEM239Q8WW34 195 aa12.85□□□□□ -0.35
DDX54-203ENST00000546869 DNAJA3Q96EY1 480 aa12.85□□□□□ -0.35
DDX54-203ENST00000546869 ASPNQ9BXN1 380 aa12.85□□□□□ -0.35
DDX54-203ENST00000546869 OPN3Q9H1Y3 402 aaPredicted RBP12.85□□□□□ -0.35
DDX54-203ENST00000546869 OR10A4Q9H209 315 aa12.85□□□□□ -0.35
DDX54-203ENST00000546869 FKRPQ9H9S5 495 aa12.85□□□□□ -0.35
DDX54-203ENST00000546869 IL1RAPQ9NPH3 570 aa12.85□□□□□ -0.35
DDX54-203ENST00000546869 MEPEQ9NQ76 525 aaPredicted RBP12.85□□□□□ -0.35
DDX54-203ENST00000546869 MAN2C1Q9NTJ4 1040 aa12.85□□□□□ -0.35
DDX54-203ENST00000546869 ZNF229Q9UJW7 825 aa12.85□□□□□ -0.35
DDX54-203ENST00000546869 FAM32AQ9Y421 112 aaKnown RBP12.85□□□□□ -0.35
DDX54-203ENST00000546869 INTS1Q8N201 2190 aaKnown RBP12.84□□□□□ -0.35
DDX54-203ENST00000546869 A0A1W2PRQ8 180 aa12.84□□□□□ -0.35
DDX54-203ENST00000546869 TCRBV5S2A0A599 114 aa12.84□□□□□ -0.35
DDX54-203ENST00000546869 MS4A18H0YCH9 400 aa12.84□□□□□ -0.35
DDX54-203ENST00000546869 M0R082 166 aa12.84□□□□□ -0.35
DDX54-203ENST00000546869 ASAH2BP0C7U1 165 aa12.84□□□□□ -0.35
DDX54-203ENST00000546869 HOXB6P17509 224 aaKnown RBP12.84□□□□□ -0.35
DDX54-203ENST00000546869 VLDLRP98155 873 aa12.84□□□□□ -0.35
DDX54-203ENST00000546869 DGCR6Q14129 220 aa12.84□□□□□ -0.35
DDX54-203ENST00000546869 MS4A18Q3C1V0 323 aa12.84□□□□□ -0.35
DDX54-203ENST00000546869 CREB3L2Q70SY1 520 aa12.84□□□□□ -0.35
DDX54-203ENST00000546869 P3H2Q8IVL5 708 aa12.84□□□□□ -0.35
DDX54-203ENST00000546869 OR9K2Q8NGE7 335 aa12.84□□□□□ -0.35
DDX54-203ENST00000546869 ZNF417Q8TAU3 575 aa12.84□□□□□ -0.35
DDX54-203ENST00000546869 TMEM255BQ8WV15 326 aa12.84□□□□□ -0.35
DDX54-203ENST00000546869 MCUR1Q96AQ8 359 aa12.84□□□□□ -0.35
DDX54-203ENST00000546869 DHRS1Q96LJ7 313 aa12.84□□□□□ -0.35
DDX54-203ENST00000546869 OXGR1Q96P68 337 aa12.84□□□□□ -0.35
DDX54-203ENST00000546869 MOGAT1Q96PD6 335 aa12.84□□□□□ -0.35
DDX54-203ENST00000546869 ZNF587Q96SQ5 575 aaPredicted RBP12.84□□□□□ -0.35
DDX54-203ENST00000546869 MAGIXQ9H6Y5 334 aa12.84□□□□□ -0.35
DDX54-203ENST00000546869 NMNAT1Q9HAN9 279 aaPredicted RBP12.84□□□□□ -0.35
DDX54-203ENST00000546869 GALNT8Q9NY28 637 aa12.84□□□□□ -0.35
DDX54-203ENST00000546869 NOSIPQ9Y314 301 aaKnown RBP12.84□□□□□ -0.35
DDX54-203ENST00000546869 MED31Q9Y3C7 131 aa12.84□□□□□ -0.35
DDX54-203ENST00000546869 ASH1LQ9NR48 2969 aaKnown RBP12.83□□□□□ -0.36
DDX54-203ENST00000546869 AQP12BA6NM10 295 aa12.83□□□□□ -0.36
DDX54-203ENST00000546869 J3KTA2 159 aa12.83□□□□□ -0.36
DDX54-203ENST00000546869 PLPP3O14495 311 aa12.83□□□□□ -0.36
DDX54-203ENST00000546869 HNRNPRO43390 633 aaKnown RBP12.83□□□□□ -0.36
DDX54-203ENST00000546869 MRPL33O75394 65 aaKnown RBP12.83□□□□□ -0.36
DDX54-203ENST00000546869 PDE5AO76074 875 aa12.83□□□□□ -0.36
DDX54-203ENST00000546869 STAMBPO95630 424 aa12.83□□□□□ -0.36
DDX54-203ENST00000546869 TSPAN19P0C672 248 aa12.83□□□□□ -0.36
DDX54-203ENST00000546869 COX6B1P14854 86 aa12.83□□□□□ -0.36
DDX54-203ENST00000546869 ATP6V1B2P21281 511 aa12.83□□□□□ -0.36
DDX54-203ENST00000546869 COL8A1P27658 744 aa12.83□□□□□ -0.36
DDX54-203ENST00000546869 UQCRC1P31930 480 aa12.83□□□□□ -0.36
DDX54-203ENST00000546869 NTF4P34130 210 aa12.83□□□□□ -0.36
DDX54-203ENST00000546869 MAGEA2P43356 314 aa12.83□□□□□ -0.36
DDX54-203ENST00000546869 YAP1P46937 504 aaKnown RBP12.83□□□□□ -0.36
DDX54-203ENST00000546869 UGT2B15P54855 530 aa12.83□□□□□ -0.36
DDX54-203ENST00000546869 SMIM11AP58511 58 aa12.83□□□□□ -0.36
DDX54-203ENST00000546869 ZP4Q12836 540 aa12.83□□□□□ -0.36
DDX54-203ENST00000546869 P2RY6Q15077 328 aa12.83□□□□□ -0.36
DDX54-203ENST00000546869 NHLRC1Q6VVB1 395 aa12.83□□□□□ -0.36
DDX54-203ENST00000546869 CYP2R1Q6VVX0 501 aa12.83□□□□□ -0.36
DDX54-203ENST00000546869 Q6ZT83 130 aa12.83□□□□□ -0.36
DDX54-203ENST00000546869 PXKQ7Z7A4 578 aa12.83□□□□□ -0.36
DDX54-203ENST00000546869 EPHX4Q8IUS5 362 aa12.83□□□□□ -0.36
DDX54-203ENST00000546869 AQP12AQ8IXF9 295 aa12.83□□□□□ -0.36
DDX54-203ENST00000546869 GABRG1Q8N1C3 465 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms