RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 ECHS1P30084 290 aa10.97□□□□□ -0.65
SCAF11-208ENST00000546534 SELENOPP49908 381 aa10.97□□□□□ -0.65
SCAF11-208ENST00000546534 POLR2HP52434 150 aaKnown RBP10.97□□□□□ -0.65
SCAF11-208ENST00000546534 LMO4P61968 165 aa10.97□□□□□ -0.65
SCAF11-208ENST00000546534 ETF1P62495 437 aaKnown RBP10.97□□□□□ -0.65
SCAF11-208ENST00000546534 KCNJ10P78508 379 aa10.97□□□□□ -0.65
SCAF11-208ENST00000546534 POU3F1Q03052 451 aaPredicted RBP10.97□□□□□ -0.65
SCAF11-208ENST00000546534 CEACAM7Q14002 265 aa10.97□□□□□ -0.65
SCAF11-208ENST00000546534 MSMPQ1L6U9 139 aa10.97□□□□□ -0.65
SCAF11-208ENST00000546534 KANK2Q63ZY3 851 aa10.97□□□□□ -0.65
SCAF11-208ENST00000546534 TYW3Q6IPR3 259 aaKnown RBP10.97□□□□□ -0.65
SCAF11-208ENST00000546534 TREML4Q6UXN2 200 aa10.97□□□□□ -0.65
SCAF11-208ENST00000546534 GPAT4Q86UL3 456 aa10.97□□□□□ -0.65
SCAF11-208ENST00000546534 DDIASQ8IXT1 998 aa10.97□□□□□ -0.65
SCAF11-208ENST00000546534 NATD1Q8N6N6 113 aa10.97□□□□□ -0.65
SCAF11-208ENST00000546534 ZDHHC22Q8N966 263 aa10.97□□□□□ -0.65
SCAF11-208ENST00000546534 OIT3Q8WWZ8 545 aa10.97□□□□□ -0.65
SCAF11-208ENST00000546534 CNOT9Q92600 299 aaKnown RBP10.97□□□□□ -0.65
SCAF11-208ENST00000546534 SLC6A7Q99884 636 aa10.97□□□□□ -0.65
SCAF11-208ENST00000546534 SUCNR1Q9BXA5 334 aa10.97□□□□□ -0.65
SCAF11-208ENST00000546534 OR51I1Q9H343 314 aa10.97□□□□□ -0.65
SCAF11-208ENST00000546534 PIF1Q9H611 641 aa10.97□□□□□ -0.65
SCAF11-208ENST00000546534 MOV10Q9HCE1 1003 aaKnown RBP10.97□□□□□ -0.65
SCAF11-208ENST00000546534 WDR45Q9Y484 360 aa10.97□□□□□ -0.65
SCAF11-208ENST00000546534 NUP214P35658 2090 aaPredicted RBP10.96□□□□□ -0.65
SCAF11-208ENST00000546534 TRAV20A0A0B4J274 112 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 LIPT2A6NK58 231 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 AQP7P3A6NL99 342 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 TMEM233B4DJY2 109 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 PIP5K1BO14986 540 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 SYNGR3O43761 229 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 PEX11AO75192 247 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 GLRA3O75311 464 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 UPK3AO75631 287 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 GPIP06744 558 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 ABHD2P08910 425 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 OR12D1P0DN82 309 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 CPA3P15088 417 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 TCN1P20061 433 aaPredicted RBP10.96□□□□□ -0.65
SCAF11-208ENST00000546534 MAPK1P28482 360 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 FUT5Q11128 374 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 SNTB2Q13425 540 aaKnown RBP10.96□□□□□ -0.65
SCAF11-208ENST00000546534 DAG1Q14118 895 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 OR7A5Q15622 319 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 PDCD2Q16342 344 aaPredicted RBP10.96□□□□□ -0.65
SCAF11-208ENST00000546534 UGT3A2Q3SY77 523 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 FAM153CQ494X1 144 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 SLC9B1Q4ZJI4 515 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 MIDNQ504T8 468 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 TMEM225Q6GV28 225 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 KRT80Q6KB66 452 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 NIPAL3Q6P499 406 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 FRRS1Q6ZNA5 592 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 RIMKLAQ8IXN7 391 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 MIPOL1Q8TD10 442 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 TWIST2Q8WVJ9 160 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 XAGE5Q8WWM1 108 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 RDH5Q92781 318 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 RAB8BQ92930 207 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 MRPL24Q96A35 216 aaKnown RBP10.96□□□□□ -0.65
SCAF11-208ENST00000546534 SLC35G5Q96KT7 338 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 PRPF18Q99633 342 aaKnown RBP10.96□□□□□ -0.65
SCAF11-208ENST00000546534 C1orf50Q9BV19 199 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 DUSP26Q9BV47 211 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 MRPL37Q9BZE1 423 aaKnown RBP10.96□□□□□ -0.65
SCAF11-208ENST00000546534 G6PC2Q9NQR9 355 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 POLE3Q9NRF9 147 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.96□□□□□ -0.65
SCAF11-208ENST00000546534 ZNF275Q9NSD4 429 aaPredicted RBP10.96□□□□□ -0.65
SCAF11-208ENST00000546534 EXD2Q9NVH0 621 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 REV1Q9UBZ9 1251 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 TBK1Q9UHD2 729 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 CMAHPQ9Y471 501 aa10.96□□□□□ -0.65
SCAF11-208ENST00000546534 RNF103-CHMP3A0A140T963 221 aa10.95□□□□□ -0.66
SCAF11-208ENST00000546534 ZNF503-AS2A6NEH8 195 aa10.95□□□□□ -0.66
SCAF11-208ENST00000546534 M0R233 179 aa10.95□□□□□ -0.66
SCAF11-208ENST00000546534 LYPLA1O75608 230 aaPredicted RBP10.95□□□□□ -0.66
SCAF11-208ENST00000546534 BCL10O95999 233 aa10.95□□□□□ -0.66
SCAF11-208ENST00000546534 GUSBP08236 651 aa10.95□□□□□ -0.66
SCAF11-208ENST00000546534 ACHEP22303 614 aa10.95□□□□□ -0.66
SCAF11-208ENST00000546534 P2RY4P51582 365 aa10.95□□□□□ -0.66
SCAF11-208ENST00000546534 MAP2K6P52564 334 aa10.95□□□□□ -0.66
SCAF11-208ENST00000546534 TMEM33P57088 247 aa10.95□□□□□ -0.66
SCAF11-208ENST00000546534 UBA52P62987 128 aaKnown RBP10.95□□□□□ -0.66
SCAF11-208ENST00000546534 ARF1P84077 181 aaKnown RBP10.95□□□□□ -0.66
SCAF11-208ENST00000546534 ROR2Q01974 943 aaKnown RBP10.95□□□□□ -0.66
SCAF11-208ENST00000546534 FOXL1Q12952 345 aa10.95□□□□□ -0.66
SCAF11-208ENST00000546534 NPRL3Q12980 569 aa10.95□□□□□ -0.66
SCAF11-208ENST00000546534 CCDC153Q494R4 210 aa10.95□□□□□ -0.66
SCAF11-208ENST00000546534 ATAD3BQ5T9A4 648 aa10.95□□□□□ -0.66
SCAF11-208ENST00000546534 IL23RQ5VWK5 629 aa10.95□□□□□ -0.66
SCAF11-208ENST00000546534 CREB3L2Q70SY1 520 aa10.95□□□□□ -0.66
SCAF11-208ENST00000546534 C1QL2Q7Z5L3 287 aa10.95□□□□□ -0.66
SCAF11-208ENST00000546534 HOMEZQ8IX15 550 aa10.95□□□□□ -0.66
SCAF11-208ENST00000546534 ALDH16A1Q8IZ83 802 aa10.95□□□□□ -0.66
SCAF11-208ENST00000546534 CLECL1Q8IZS7 167 aa10.95□□□□□ -0.66
SCAF11-208ENST00000546534 RIBC1Q8N443 379 aaPredicted RBP10.95□□□□□ -0.66
SCAF11-208ENST00000546534 TEX29Q8N6K0 151 aa10.95□□□□□ -0.66
SCAF11-208ENST00000546534 YIPF5Q969M3 257 aa10.95□□□□□ -0.66
SCAF11-208ENST00000546534 PPP3R2Q96LZ3 170 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms