RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 MARC2Q969Z3 335 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 SLC45A3Q96JT2 553 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 CNN2Q99439 309 aaKnown RBP7.97□□□□□ -1.13
CLIP1-218ENST00000545889 ZNF226Q9NYT6 803 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 EXOSC1Q9Y3B2 195 aaKnown RBP7.97□□□□□ -1.13
CLIP1-218ENST00000545889 OR14I1A6ND48 311 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 LRRC30A6NM36 301 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 ZNF264O43296 627 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 HCRTR1O43613 425 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 MT-ND2P03891 347 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 CDK1P06493 297 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 RHCEP18577 417 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 RAB3BP20337 219 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 GABRR1P24046 479 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 EIF1P41567 113 aaKnown RBP7.97□□□□□ -1.13
CLIP1-218ENST00000545889 HTR5AP47898 357 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 POLR2HP52434 150 aaKnown RBP7.97□□□□□ -1.13
CLIP1-218ENST00000545889 B4GALNT1Q00973 533 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 EMX1Q04741 257 aaPredicted RBP7.97□□□□□ -1.13
CLIP1-218ENST00000545889 TMEM69Q5SWH9 247 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 CCNJQ5T5M9 372 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 NIPAL3Q6P499 406 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 ZNF613Q6PF04 617 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 SLC22A25Q6T423 547 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 SBSNQ6UWP8 590 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 SLC46A3Q7Z3Q1 461 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 CCDC36Q8IYA8 594 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 PM20D2Q8IYS1 436 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 LINC00518Q8N0U6 118 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 LILRB2Q8N423 598 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 MFSD9Q8NBP5 474 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 NANPQ8TBE9 248 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 STT3BQ8TCJ2 826 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 CA5BP1Q8WTZ4 195 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 H1FXQ92522 213 aaKnown RBP7.97□□□□□ -1.13
CLIP1-218ENST00000545889 LIN7BQ9HAP6 207 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 PRDM9Q9NQV7 894 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 RNF6Q9Y252 685 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 MKI67P46013 3256 aaKnown RBP7.97□□□□□ -1.13
CLIP1-218ENST00000545889 CACNA1IQ9P0X4 2223 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 C13orf42A0A1B0GVH6 325 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 FAM171A2A8MVW0 826 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 LEUTXA8MZ59 168 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 DISC1C4P0D8 188 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 LMO7DNF2Z398 122 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 AMY2BP19961 511 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 RPS23P62266 143 aaKnown RBP7.96□□□□□ -1.13
CLIP1-218ENST00000545889 TRA2BP62995 288 aaKnown RBP7.96□□□□□ -1.13
CLIP1-218ENST00000545889 POU4F2Q12837 409 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 KCNAB1Q14722 419 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 RAB11BQ15907 218 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 YOD1Q5VVQ6 348 aaPredicted RBP7.96□□□□□ -1.13
CLIP1-218ENST00000545889 HBMQ6B0K9 141 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 MISPQ8IVT2 679 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 IL17RDQ8NFM7 739 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 OR8J3Q8NGG0 315 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 COQ8AQ8NI60 647 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 ZDHHC16Q969W1 377 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 LCORQ96JN0 433 aaPredicted RBP7.96□□□□□ -1.13
CLIP1-218ENST00000545889 PCED1AQ9H1Q7 454 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 KIR3DX1Q9H7L2 352 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 SNX11Q9Y5W9 270 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 ATP23Q9Y6H3 246 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 UNC13CQ8NB66 2214 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 LOC100130705A0A1B0GUX0 176 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 PMS2P1A4D2B8 440 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 ORC5O43913 435 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 EIF1BO60739 113 aaKnown RBP7.96□□□□□ -1.13
CLIP1-218ENST00000545889 CRYAAP02489 173 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 GKN3PP0CG01 181 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 DCTP40126 519 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 CXADRP78310 365 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 SLC35A1P78382 337 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 KCNJ10P78508 379 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 ARL6IP1Q15041 203 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 SLC36A2Q495M3 483 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 ZNF813Q6ZN06 617 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 PRSS42Q7Z5A4 293 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 SLITRK4Q8IW52 837 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 CPEB3Q8NE35 698 aaKnown RBP7.96□□□□□ -1.13
CLIP1-218ENST00000545889 OR8J1Q8NGP2 316 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 SLC7A6Q92536 515 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 EGLN2Q96KS0 407 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 SLC46A1Q96NT5 459 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 DOK1Q99704 481 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 AIG1Q9NVV5 245 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 USP36Q9P275 1121 aaKnown RBP7.96□□□□□ -1.13
CLIP1-218ENST00000545889 MBD1Q9UIS9 605 aaPredicted RBP7.96□□□□□ -1.13
CLIP1-218ENST00000545889 COPS3Q9UNS2 423 aa7.96□□□□□ -1.13
CLIP1-218ENST00000545889 UBE2J1Q9Y385 318 aaPredicted RBP7.96□□□□□ -1.13
CLIP1-218ENST00000545889 A0A1W2PQ09 198 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 CTDSP2O14595 271 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 FRS3O43559 492 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 SLC22A5O76082 557 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 CD1CP29017 333 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 SLC19A1P41440 591 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 PITPNBP48739 271 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 EFNA3P52797 238 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 FAM83HQ6ZRV2 1179 aaPredicted RBP7.96□□□□□ -1.14
CLIP1-218ENST00000545889 LHFPL3Q86UP9 236 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms