RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 ZNF440Q8IYI8 595 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 GABRG1Q8N1C3 465 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 ATP6V1C2Q8NEY4 427 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 SLC38A5Q8WUX1 472 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 DYDC1Q8WWB3 177 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 GTF2H4Q92759 462 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 VPS33AQ96AX1 596 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 ZHX1-C8orf76Q96EF9 292 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 RAX2Q96IS3 184 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 CCDC28BQ9BUN5 200 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 KLHL4Q9C0H6 718 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 ACTR6Q9GZN1 396 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 RAD21L1Q9H4I0 556 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 MTHFD2LQ9H903 347 aaPredicted RBP6.81□□□□□ -1.32
SNHG1-223ENST00000545440 CTPS2Q9NRF8 586 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 INTS9Q9NV88 658 aaKnown RBP6.81□□□□□ -1.32
SNHG1-223ENST00000545440 C6orf203Q9P0P8 240 aaPredicted RBP6.81□□□□□ -1.32
SNHG1-223ENST00000545440 ING1Q9UK53 422 aaPredicted RBP6.81□□□□□ -1.32
SNHG1-223ENST00000545440 PRDM4Q9UKN5 801 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 GPR52Q9Y2T5 361 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 HDGFL3Q9Y3E1 203 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 IGKV3D-15A0A087WSY6 115 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 A0A096LPI6 279 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 IGHV3-15A0A0B4J1V0 119 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.8□□□□□ -1.32
SNHG1-223ENST00000545440 CFAP73A6NFT4 308 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 AP3D1O14617 1153 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 PAX4O43316 350 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 ZNF208O43345 1280 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 GCM2O75603 506 aaPredicted RBP6.8□□□□□ -1.32
SNHG1-223ENST00000545440 C8BP07358 591 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 TFPTP0C1Z6 253 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 ETFAP13804 333 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 COX5AP20674 150 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 PPIBP23284 216 aaKnown RBP6.8□□□□□ -1.32
SNHG1-223ENST00000545440 LOXP28300 417 aaPredicted RBP6.8□□□□□ -1.32
SNHG1-223ENST00000545440 RYKP34925 604 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 SLC1A3P43003 542 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 CRATP43155 626 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 OR3A2P47893 321 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 IDH2P48735 452 aaKnown RBP6.8□□□□□ -1.32
SNHG1-223ENST00000545440 ATP4BP51164 291 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 POLR2HP52434 150 aaKnown RBP6.8□□□□□ -1.32
SNHG1-223ENST00000545440 SLC16A1P53985 500 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 NR1H2P55055 460 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 AQP5P55064 265 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 RASGEF1BQ0VAM2 473 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 EPS8Q12929 822 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 SQLEQ14534 574 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 P2RY6Q15077 328 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 PDK3Q15120 406 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 DEFB113Q30KQ7 82 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 GTDC1Q4AE62 458 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 BEX5Q5H9J7 111 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 LRIF1Q5T3J3 769 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 SLC2A7Q6PXP3 512 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 ZNF836Q6ZNA1 936 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 SSX8Q7RTT4 187 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 NUFIP2Q7Z417 695 aaKnown RBP6.8□□□□□ -1.32
SNHG1-223ENST00000545440 STEAP2Q8NFT2 490 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 OR52P1PQ8NH57 321 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 PIGXQ8TBF5 258 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 CNOT9Q92600 299 aaKnown RBP6.8□□□□□ -1.32
SNHG1-223ENST00000545440 SLC35B4Q969S0 331 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 SPDL1Q96EA4 605 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 PIK3IP1Q96FE7 263 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 AURKBQ96GD4 344 aaPredicted RBP6.8□□□□□ -1.32
SNHG1-223ENST00000545440 ZC3HAV1LQ96H79 300 aaKnown RBP6.8□□□□□ -1.32
SNHG1-223ENST00000545440 TMEM19Q96HH6 336 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 MAGEB18Q96M61 343 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 EBF4Q9BQW3 602 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 SIKE1Q9BRV8 207 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 HDHD5Q9BXW7 423 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 POTEKPQ9BYX7 375 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 PAIP1Q9H074 479 aaKnown RBP6.8□□□□□ -1.32
SNHG1-223ENST00000545440 POFUT1Q9H488 388 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 CACYBPQ9HB71 228 aaKnown RBP6.8□□□□□ -1.32
SNHG1-223ENST00000545440 BCL2L10Q9HD36 194 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 A4GALTQ9NPC4 353 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 BEX4Q9NWD9 120 aaPredicted RBP6.8□□□□□ -1.32
SNHG1-223ENST00000545440 EMC3Q9P0I2 261 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 TRAPPC4Q9Y296 219 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 ZNF443Q9Y2A4 671 aaPredicted RBP6.8□□□□□ -1.32
SNHG1-223ENST00000545440 GMEB1Q9Y692 573 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 PMF1-BGLAPU3KQ54 211 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 USF3Q68DE3 2245 aa6.8□□□□□ -1.32
SNHG1-223ENST00000545440 CR1P17927 2039 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 MTORP42345 2549 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 TMED7-TICAM2A0A0A6YYA0 188 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 A0A0G2JPF8 293 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 HNRNPCL2B2RXH8 293 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 HNRNPCL3B7ZW38 293 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 CLIC1O00299 241 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 NR5A2O00482 541 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 HNRNPCL1O60812 293 aaKnown RBP6.79□□□□□ -1.32
SNHG1-223ENST00000545440 HNRNPCL4P0DMR1 293 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 TFPIP10646 304 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 CD53P19397 219 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 KLK2P20151 261 aa6.79□□□□□ -1.32
SNHG1-223ENST00000545440 FPR1P21462 350 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms