RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 FBLIM1Q8WUP2 373 aa12.41□□□□□ -0.42
SCARB1-209ENST00000545305 ZCCHC14Q8WYQ9 949 aaKnown RBP12.41□□□□□ -0.42
SCARB1-209ENST00000545305 Q96MT0 163 aa12.41□□□□□ -0.42
SCARB1-209ENST00000545305 ZNF587Q96SQ5 575 aaPredicted RBP12.41□□□□□ -0.42
SCARB1-209ENST00000545305 MRPL39Q9NYK5 338 aaKnown RBP12.41□□□□□ -0.42
SCARB1-209ENST00000545305 ZNF226Q9NYT6 803 aa12.41□□□□□ -0.42
SCARB1-209ENST00000545305 CSAG2Q9Y5P2 127 aa12.41□□□□□ -0.42
SCARB1-209ENST00000545305 CEP295Q9C0D2 2601 aa12.41□□□□□ -0.42
SCARB1-209ENST00000545305 CNTRLQ7Z7A1 2325 aa12.4□□□□□ -0.42
SCARB1-209ENST00000545305 A0A1W2PNR3 127 aa12.4□□□□□ -0.42
SCARB1-209ENST00000545305 RIIAD1A6NNX1 92 aa12.4□□□□□ -0.42
SCARB1-209ENST00000545305 C1QTNF9BB2RNN3 333 aa12.4□□□□□ -0.42
SCARB1-209ENST00000545305 MCIDASD6RGH6 385 aa12.4□□□□□ -0.42
SCARB1-209ENST00000545305 SULT2B1O00204 365 aa12.4□□□□□ -0.42
SCARB1-209ENST00000545305 BHLHE40O14503 412 aa12.4□□□□□ -0.42
SCARB1-209ENST00000545305 IDH3BO43837 385 aa12.4□□□□□ -0.42
SCARB1-209ENST00000545305 FAM20BO75063 409 aa12.4□□□□□ -0.42
SCARB1-209ENST00000545305 PMS2P2O95744 297 aa12.4□□□□□ -0.42
SCARB1-209ENST00000545305 OPN1LWP04000 364 aa12.4□□□□□ -0.42
SCARB1-209ENST00000545305 C1QTNF9P0C862 333 aa12.4□□□□□ -0.42
SCARB1-209ENST00000545305 ADORA3P0DMS8 318 aa12.4□□□□□ -0.42
SCARB1-209ENST00000545305 IMPDH2P12268 514 aa12.4□□□□□ -0.42
SCARB1-209ENST00000545305 FMO3P31513 532 aa12.4□□□□□ -0.42
SCARB1-209ENST00000545305 SNRPGP62308 76 aaKnown RBP12.4□□□□□ -0.42
SCARB1-209ENST00000545305 CSNK2BP67870 215 aa12.4□□□□□ -0.42
SCARB1-209ENST00000545305 CSNK2A1P68400 391 aaPredicted RBP12.4□□□□□ -0.42
SCARB1-209ENST00000545305 SLC35A1P78382 337 aa12.4□□□□□ -0.42
SCARB1-209ENST00000545305 FHL1Q13642 323 aa12.4□□□□□ -0.42
SCARB1-209ENST00000545305 ZNF169Q14929 603 aaPredicted RBP12.4□□□□□ -0.42
SCARB1-209ENST00000545305 TBR1Q16650 682 aa12.4□□□□□ -0.42
SCARB1-209ENST00000545305 KCTD21Q4G0X4 260 aa12.4□□□□□ -0.42
SCARB1-209ENST00000545305 H1FNTQ75WM6 255 aaPredicted RBP12.4□□□□□ -0.42
SCARB1-209ENST00000545305 IGFN1Q86VF2 1251 aa12.4□□□□□ -0.42
SCARB1-209ENST00000545305 MOSPD2Q8NHP6 518 aa12.4□□□□□ -0.42
SCARB1-209ENST00000545305 RHOXF1Q8NHV9 184 aa12.4□□□□□ -0.42
SCARB1-209ENST00000545305 TMEM163Q8TC26 289 aa12.4□□□□□ -0.42
SCARB1-209ENST00000545305 KLHL15Q96M94 604 aa12.4□□□□□ -0.42
SCARB1-209ENST00000545305 ERMAPQ96PL5 475 aaPredicted RBP12.4□□□□□ -0.42
SCARB1-209ENST00000545305 IL4I1Q96RQ9 567 aa12.4□□□□□ -0.42
SCARB1-209ENST00000545305 GPX7Q96SL4 187 aaPredicted RBP12.4□□□□□ -0.42
SCARB1-209ENST00000545305 ZNF696Q9H7X3 374 aa12.4□□□□□ -0.42
SCARB1-209ENST00000545305 CHST11Q9NPF2 352 aa12.4□□□□□ -0.42
SCARB1-209ENST00000545305 INIPQ9NRY2 104 aa12.4□□□□□ -0.42
SCARB1-209ENST00000545305 SCN3BQ9NY72 215 aa12.4□□□□□ -0.42
SCARB1-209ENST00000545305 KLHL21Q9UJP4 597 aa12.4□□□□□ -0.42
SCARB1-209ENST00000545305 A0A087WV48 116 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 SNTNA6NMZ2 147 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 M0R3G1 203 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 SLC1A7O00341 560 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 PLPP3O14495 311 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 TFECO14948 347 aaPredicted RBP12.39□□□□□ -0.43
SCARB1-209ENST00000545305 SURF4O15260 269 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 RNF13O43567 381 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 TLX2O43763 284 aaPredicted RBP12.39□□□□□ -0.43
SCARB1-209ENST00000545305 PRKYO43930 277 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 FZD7O75084 574 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 SMNDC1O75940 238 aaKnown RBP eCLIP12.39□□□□□ -0.436e-24■■□□□ 13
SCARB1-209ENST00000545305 CD14P08571 375 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 CCDC159P0C7I6 412 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 ZNF24P17028 368 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 ZNF3P17036 446 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 PAICSP22234 425 aaKnown RBP12.39□□□□□ -0.43
SCARB1-209ENST00000545305 SHC1P29353 583 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 DIO1P49895 249 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 MLLT10P55197 1068 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 CTXN1P60606 82 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 CXADRP78310 365 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 FOXK2Q01167 660 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 PUDPQ08623 228 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 SLC10A1Q14973 349 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 PDSS1Q5T2R2 415 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 MEDAGQ5VYS4 303 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 TMPPEQ6ZT21 453 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 ADPRHL1Q8NDY3 354 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 BPIFB6Q8NFQ5 453 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 SLC39A7Q92504 469 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 UBE2FQ969M7 185 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 ZNF566Q969W8 418 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 MIB2Q96AX9 1013 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 ZHX1-C8orf76Q96EF9 292 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 KATNB1Q9BVA0 655 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 ENKD1Q9H0I2 346 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 SLC6A15Q9H2J7 730 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 EXO5Q9H790 373 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 NRIP3Q9NQ35 241 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 CMC2Q9NRP2 79 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 TRAPPC4Q9Y296 219 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 B3GALT5Q9Y2C3 310 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 TPRKBQ9Y3C4 175 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 IER3IP1Q9Y5U9 82 aa12.39□□□□□ -0.43
SCARB1-209ENST00000545305 A0A1W2PRG6 482 aa12.38□□□□□ -0.43
SCARB1-209ENST00000545305 SH3D21A4FU49 640 aa12.38□□□□□ -0.43
SCARB1-209ENST00000545305 TMEM8BA6NDV4 472 aa12.38□□□□□ -0.43
SCARB1-209ENST00000545305 C11orf98E9PRG8 122 aa12.38□□□□□ -0.43
SCARB1-209ENST00000545305 EIF1AYO14602 144 aaKnown RBP12.38□□□□□ -0.43
SCARB1-209ENST00000545305 IMPA2O14732 288 aa12.38□□□□□ -0.43
SCARB1-209ENST00000545305 ARPC3O15145 178 aa12.38□□□□□ -0.43
SCARB1-209ENST00000545305 SEC14L5O43304 696 aa12.38□□□□□ -0.43
SCARB1-209ENST00000545305 EIF1BO60739 113 aaKnown RBP12.38□□□□□ -0.43
SCARB1-209ENST00000545305 WBP4O75554 376 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms