RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-223	ENST00000544669	LINC01565	O15544	149 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	NOS1AP	O75052	506 aa	Predicted RBP	11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	PEX14	O75381	377 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	IL33	O95760	270 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	REN	P00797	406 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	IGKV1D-16	P01601	117 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	GYPB	P06028	91 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	PRKCA	P17252	672 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	PTN	P21246	168 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	FASLG	P48023	281 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	AGFG1	P52594	562 aa	Known RBP	11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	RPS11	P62280	158 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	SNRPN	P63162	240 aa	Known RBP	11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	RASGEF1B	Q0VAM2	473 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	MADCAM1	Q13477	382 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669		Q499Y3	187 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	SNAP47	Q5SQN1	464 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	FAM27D1	Q5T7N8	215 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	IL20RB	Q6UXL0	311 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	RPTN	Q6XPR3	784 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	GKN2	Q86XP6	184 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	OR6V1	Q8N148	313 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	OR6K6	Q8NGW6	343 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	C16orf52	Q8NHV5	167 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	ZNF417	Q8TAU3	575 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	MARVELD3	Q96A59	401 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	NMNAT3	Q96T66	252 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	CLEC4M	Q9H2X3	399 aa	Predicted RBP	11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	NKX2-4	Q9H2Z4	354 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	GPN1	Q9HCN4	374 aa	Predicted RBP	11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	PCDH10	Q9P2E7	1040 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	GRHPR	Q9UBQ7	328 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	ZNF222	Q9UK12	451 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	MRPS7	Q9Y2R9	242 aa	Known RBP	11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	BOLA1	Q9Y3E2	137 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	COL4A2	P08572	1712 aa		11.92	□□□□□ -0.5
CPSF7-223	ENST00000544669	MEIKIN	A0A087WXM9	373 aa		11.92	□□□□□ -0.5
CPSF7-223	ENST00000544669	ACOT7	O00154	380 aa		11.92	□□□□□ -0.5
CPSF7-223	ENST00000544669	FABP7	O15540	132 aa		11.92	□□□□□ -0.5
CPSF7-223	ENST00000544669	LANCL1	O43813	399 aa		11.92	□□□□□ -0.5
CPSF7-223	ENST00000544669	KRT33A	O76009	404 aa		11.92	□□□□□ -0.5
CPSF7-223	ENST00000544669	EN2	P19622	333 aa	Predicted RBP	11.92	□□□□□ -0.5
CPSF7-223	ENST00000544669	GIF	P27352	417 aa		11.92	□□□□□ -0.5
CPSF7-223	ENST00000544669	BTC	P35070	178 aa		11.92	□□□□□ -0.5
CPSF7-223	ENST00000544669	RORA	P35398	523 aa		11.92	□□□□□ -0.5
CPSF7-223	ENST00000544669	NAA10	P41227	235 aa	Predicted RBP	11.92	□□□□□ -0.5
CPSF7-223	ENST00000544669	HTR2B	P41595	481 aa		11.92	□□□□□ -0.5
CPSF7-223	ENST00000544669	GALK2	Q01415	458 aa		11.92	□□□□□ -0.5
CPSF7-223	ENST00000544669	KLF9	Q13886	244 aa	Predicted RBP	11.92	□□□□□ -0.5
CPSF7-223	ENST00000544669	GRM7	Q14831	915 aa		11.92	□□□□□ -0.5
CPSF7-223	ENST00000544669	FCN2	Q15485	313 aa		11.92	□□□□□ -0.5
CPSF7-223	ENST00000544669	ZNF74	Q16587	644 aa		11.92	□□□□□ -0.5
CPSF7-223	ENST00000544669	GSG1	Q2KHT4	349 aa		11.92	□□□□□ -0.5
CPSF7-223	ENST00000544669	ALG10	Q5BKT4	473 aa		11.92	□□□□□ -0.5
CPSF7-223	ENST00000544669	C9orf50	Q5SZB4	431 aa		11.92	□□□□□ -0.5
CPSF7-223	ENST00000544669	FAM205BP	Q63HN1	556 aa		11.92	□□□□□ -0.5
CPSF7-223	ENST00000544669	LEG1	Q6P5S2	330 aa		11.92	□□□□□ -0.5
CPSF7-223	ENST00000544669	SSX6	Q7RTT6	188 aa		11.92	□□□□□ -0.5
CPSF7-223	ENST00000544669	ZNF615	Q8N8J6	731 aa		11.92	□□□□□ -0.5
CPSF7-223	ENST00000544669	SNAPC3	Q92966	411 aa		11.92	□□□□□ -0.5
CPSF7-223	ENST00000544669	MVB12A	Q96EY5	273 aa		11.92	□□□□□ -0.5
CPSF7-223	ENST00000544669	ADAD1	Q96M93	576 aa	Known RBP	11.92	□□□□□ -0.5
CPSF7-223	ENST00000544669	GPR137	Q96N19	417 aa		11.92	□□□□□ -0.5
CPSF7-223	ENST00000544669	OR14A2	Q96R54	314 aa		11.92	□□□□□ -0.5
CPSF7-223	ENST00000544669	FAM60A	Q9NP50	221 aa		11.92	□□□□□ -0.5
CPSF7-223	ENST00000544669	NOX4	Q9NPH5	578 aa		11.92	□□□□□ -0.5
CPSF7-223	ENST00000544669	FBXL4	Q9UKA2	621 aa		11.92	□□□□□ -0.5
CPSF7-223	ENST00000544669	GMEB2	Q9UKD1	530 aa		11.92	□□□□□ -0.5
CPSF7-223	ENST00000544669	ERVK-19	Q9WJR5	959 aa		11.92	□□□□□ -0.5
CPSF7-223	ENST00000544669	TMEM212	A6NML5	194 aa		11.91	□□□□□ -0.5
CPSF7-223	ENST00000544669	DVL2	O14641	736 aa		11.91	□□□□□ -0.5
CPSF7-223	ENST00000544669	KHNYN	O15037	678 aa	Known RBP	11.91	□□□□□ -0.5
CPSF7-223	ENST00000544669	ZNF264	O43296	627 aa		11.91	□□□□□ -0.5
CPSF7-223	ENST00000544669	FOXS1	O43638	330 aa		11.91	□□□□□ -0.5
CPSF7-223	ENST00000544669	IFNA7	P01567	189 aa		11.91	□□□□□ -0.5
CPSF7-223	ENST00000544669	IGHV4-34	P06331	123 aa		11.91	□□□□□ -0.5
CPSF7-223	ENST00000544669	SNRPB	P14678	240 aa	Known RBP	11.91	□□□□□ -0.5
CPSF7-223	ENST00000544669	PSMB1	P20618	241 aa	Known RBP	11.91	□□□□□ -0.5
CPSF7-223	ENST00000544669	GDNF	P39905	211 aa		11.91	□□□□□ -0.5
CPSF7-223	ENST00000544669	CAPZB	P47756	277 aa		11.91	□□□□□ -0.5
CPSF7-223	ENST00000544669	ART1	P52961	327 aa		11.91	□□□□□ -0.5
CPSF7-223	ENST00000544669	ALKBH1	Q13686	389 aa	Known RBP	11.91	□□□□□ -0.5
CPSF7-223	ENST00000544669	FZD2	Q14332	565 aa		11.91	□□□□□ -0.5
CPSF7-223	ENST00000544669	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	11.91	□□□□□ -0.5
CPSF7-223	ENST00000544669	ZNF684	Q5T5D7	378 aa		11.91	□□□□□ -0.5
CPSF7-223	ENST00000544669	TMEM92	Q6UXU6	159 aa		11.91	□□□□□ -0.5
CPSF7-223	ENST00000544669	NPSR1	Q6W5P4	371 aa		11.91	□□□□□ -0.5
CPSF7-223	ENST00000544669	DGAT2L6	Q6ZPD8	337 aa		11.91	□□□□□ -0.5
CPSF7-223	ENST00000544669	ATG4D	Q86TL0	474 aa	Predicted RBP	11.91	□□□□□ -0.5
CPSF7-223	ENST00000544669	GLCCI1	Q86VQ1	547 aa		11.91	□□□□□ -0.5
CPSF7-223	ENST00000544669	SLC22A18AS	Q8N1D0	253 aa		11.91	□□□□□ -0.5
CPSF7-223	ENST00000544669	C9orf62	Q8N4C0	152 aa		11.91	□□□□□ -0.5
CPSF7-223	ENST00000544669	C10orf53	Q8N6V4	93 aa		11.91	□□□□□ -0.5
CPSF7-223	ENST00000544669	OR4N2	Q8NGD1	307 aa		11.91	□□□□□ -0.5
CPSF7-223	ENST00000544669	OR5H6	Q8NGV6	325 aa		11.91	□□□□□ -0.5
CPSF7-223	ENST00000544669	OR5AK2	Q8NH90	309 aa		11.91	□□□□□ -0.5
CPSF7-223	ENST00000544669	ASB17	Q8WXJ9	295 aa		11.91	□□□□□ -0.5
CPSF7-223	ENST00000544669	SPACA7	Q96KW9	195 aa		11.91	□□□□□ -0.5
CPSF7-223	ENST00000544669	KLHL15	Q96M94	604 aa		11.91	□□□□□ -0.5
CPSF7-223	ENST00000544669	OR1F2P	Q96R84	312 aa		11.91	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms